RNA–Protein interactions for RNA: ENST00000557640.1

RD3L-201, Transcript of retinal degeneration 3 like, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RD3L, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3L-201ENST00000557640 REV1Q9UBZ9 1251 aa6.74□□□□□ -1.33
RD3L-201ENST00000557640 SOX21Q9Y651 276 aaPredicted RBP6.74□□□□□ -1.33
RD3L-201ENST00000557640 AGAP5A6NIR3 686 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 RPL36A-HNRNPH2H7BZ11 118 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 FAAHO00519 579 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 PPIHO43447 177 aaKnown RBP6.73□□□□□ -1.33
RD3L-201ENST00000557640 CDC14BO60729 498 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 PRSS23O95084 383 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 MPZL1O95297 269 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 CLPTM1O96005 669 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 HPRP00739 348 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 IGHV2-5P01817 119 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 GPIP06744 558 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 GUSBP08236 651 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 ZNF35P13682 527 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 CDKN2CP42773 168 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 CLDN17P56750 224 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 UFM1P61960 85 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 MVKQ03426 396 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 KLF10Q13118 480 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 PGS1Q32NB8 556 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 PDCD4Q53EL6 469 aaKnown RBP6.73□□□□□ -1.33
RD3L-201ENST00000557640 SPRNQ5BIV9 151 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 KLF17Q5JT82 389 aaPredicted RBP6.73□□□□□ -1.33
RD3L-201ENST00000557640 C1orf140Q5VVS0 124 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 PRAMEF8Q5VWM4 474 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 PRAMEF7Q5VXH5 474 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 COMTD1Q86VU5 262 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 VRK2Q86Y07 508 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 ZNF584Q8IVC4 421 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 HOMEZQ8IX15 550 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 MRPL41Q8IXM3 137 aaKnown RBP6.73□□□□□ -1.33
RD3L-201ENST00000557640 LRRC17Q8N6Y2 441 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 FNDC5Q8NAU1 212 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 OR9I1Q8NGQ6 314 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 RDH5Q92781 318 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 NEURL3Q96EH8 262 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 ANKRD27Q96NW4 1050 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 OR2M2Q96R28 347 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 SUCNR1Q9BXA5 334 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 POLE3Q9NRF9 147 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 SLC6A13Q9NSD5 602 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 ATAD3AQ9NVI7 634 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 ARL8BQ9NVJ2 186 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 DCAF16Q9NXF7 216 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 CMAHPQ9Y471 501 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 DSPPQ9NZW4 1301 aa6.73□□□□□ -1.33
RD3L-201ENST00000557640 IGKV1D-42A0A075B6H8 117 aa6.72□□□□□ -1.33
RD3L-201ENST00000557640 CFAP73A6NFT4 308 aa6.72□□□□□ -1.33
RD3L-201ENST00000557640 RNASET2O00584 256 aaKnown RBP6.72□□□□□ -1.33
RD3L-201ENST00000557640 UBDO15205 165 aa6.72□□□□□ -1.33
RD3L-201ENST00000557640 KRT33AO76009 404 aa6.72□□□□□ -1.33
RD3L-201ENST00000557640 GSNP06396 782 aa6.72□□□□□ -1.33
RD3L-201ENST00000557640 ERCC1P07992 297 aaPredicted RBP6.72□□□□□ -1.33
RD3L-201ENST00000557640 HLA-DOBP13765 273 aa6.72□□□□□ -1.33
RD3L-201ENST00000557640 B4GALT1P15291 398 aa6.72□□□□□ -1.33
RD3L-201ENST00000557640 PRPS1L1P21108 318 aa6.72□□□□□ -1.33
RD3L-201ENST00000557640 MDKP21741 143 aaPredicted RBP6.72□□□□□ -1.33
RD3L-201ENST00000557640 RPL3P39023 403 aaKnown RBP6.72□□□□□ -1.33
RD3L-201ENST00000557640 HTR3AP46098 478 aa6.72□□□□□ -1.33
RD3L-201ENST00000557640 SH3BGRP55822 239 aaPredicted RBP6.72□□□□□ -1.33
RD3L-201ENST00000557640 CLDN8P56748 225 aa6.72□□□□□ -1.33
RD3L-201ENST00000557640 HOXC5Q00444 222 aa6.72□□□□□ -1.33
RD3L-201ENST00000557640 GSTA3Q16772 222 aa6.72□□□□□ -1.33
RD3L-201ENST00000557640 GPAT3Q53EU6 434 aa6.72□□□□□ -1.33
RD3L-201ENST00000557640 NXNQ6DKJ4 435 aa6.72□□□□□ -1.33
RD3L-201ENST00000557640 ABHD12BQ7Z5M8 362 aaPredicted RBP6.72□□□□□ -1.33
RD3L-201ENST00000557640 RNF130Q86XS8 419 aa6.72□□□□□ -1.33
RD3L-201ENST00000557640 BPIFB2Q8N4F0 458 aa6.72□□□□□ -1.33
RD3L-201ENST00000557640 DEFB108BQ8NET1 73 aa6.72□□□□□ -1.33
RD3L-201ENST00000557640 PNPT1Q8TCS8 783 aaKnown RBP6.72□□□□□ -1.33
RD3L-201ENST00000557640 OIT3Q8WWZ8 545 aa6.72□□□□□ -1.33
RD3L-201ENST00000557640 KTI12Q96EK9 354 aaPredicted RBP6.72□□□□□ -1.33
RD3L-201ENST00000557640 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.72□□□□□ -1.33
RD3L-201ENST00000557640 EXD2Q9NVH0 621 aa6.72□□□□□ -1.33
RD3L-201ENST00000557640 RCE1Q9Y256 329 aa6.72□□□□□ -1.33
RD3L-201ENST00000557640 WIPI2Q9Y4P8 454 aa6.72□□□□□ -1.33
RD3L-201ENST00000557640 A0A0G2JMP0 313 aa6.71□□□□□ -1.34
RD3L-201ENST00000557640 A0A0X1KG70 313 aa6.71□□□□□ -1.34
RD3L-201ENST00000557640 MDFIC2A0A1B0GVS7 189 aa6.71□□□□□ -1.34
RD3L-201ENST00000557640 CDHR4A6H8M9 788 aa6.71□□□□□ -1.34
RD3L-201ENST00000557640 DUXAA6NLW8 204 aa6.71□□□□□ -1.34
RD3L-201ENST00000557640 NOTOA8MTQ0 251 aa6.71□□□□□ -1.34
RD3L-201ENST00000557640 ZNF99A8MXY4 864 aaPredicted RBP6.71□□□□□ -1.34
RD3L-201ENST00000557640 M0R3G1 203 aa6.71□□□□□ -1.34
RD3L-201ENST00000557640 FBP2O00757 339 aa6.71□□□□□ -1.34
RD3L-201ENST00000557640 CCDC22O60826 627 aa6.71□□□□□ -1.34
RD3L-201ENST00000557640 SLC43A1O75387 559 aa6.71□□□□□ -1.34
RD3L-201ENST00000557640 CPSF4O95639 269 aaKnown RBP6.71□□□□□ -1.34
RD3L-201ENST00000557640 PATE4P0C8F1 98 aa6.71□□□□□ -1.34
RD3L-201ENST00000557640 IDO1P14902 403 aa6.71□□□□□ -1.34
RD3L-201ENST00000557640 NCF2P19878 526 aaPredicted RBP6.71□□□□□ -1.34
RD3L-201ENST00000557640 MAPK1P28482 360 aa6.71□□□□□ -1.34
RD3L-201ENST00000557640 ARR3P36575 388 aa6.71□□□□□ -1.34
RD3L-201ENST00000557640 RPS5P46782 204 aaKnown RBP6.71□□□□□ -1.34
RD3L-201ENST00000557640 CAPZA2P47755 286 aa6.71□□□□□ -1.34
RD3L-201ENST00000557640 EVX1P49640 407 aa6.71□□□□□ -1.34
RD3L-201ENST00000557640 MVDP53602 400 aa6.71□□□□□ -1.34
RD3L-201ENST00000557640 NME5P56597 212 aa6.71□□□□□ -1.34
RD3L-201ENST00000557640 KRTAP10-3P60369 221 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms