RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 MSMPQ1L6U9 139 aa12.2□□□□□ -0.46
SNX6-210ENST00000557341 RABL3Q5HYI8 236 aa12.2□□□□□ -0.46
SNX6-210ENST00000557341 COQ5Q5HYK3 327 aa12.2□□□□□ -0.46
SNX6-210ENST00000557341 FAM120AOSQ5T036 256 aa12.2□□□□□ -0.46
SNX6-210ENST00000557341 ERICH5Q6P6B1 374 aa12.2□□□□□ -0.46
SNX6-210ENST00000557341 IL17RELQ6ZVW7 336 aa12.2□□□□□ -0.46
SNX6-210ENST00000557341 HDDC2Q7Z4H3 204 aa12.2□□□□□ -0.46
SNX6-210ENST00000557341 CARM1Q86X55 608 aa12.2□□□□□ -0.46
SNX6-210ENST00000557341 SKA3Q8IX90 412 aa12.2□□□□□ -0.46
SNX6-210ENST00000557341 NOXO1Q8NFA2 376 aa12.2□□□□□ -0.46
SNX6-210ENST00000557341 LRRC58Q96CX6 371 aa12.2□□□□□ -0.46
SNX6-210ENST00000557341 ECSITQ9BQ95 431 aa12.2□□□□□ -0.46
SNX6-210ENST00000557341 SYT3Q9BQG1 590 aa12.2□□□□□ -0.46
SNX6-210ENST00000557341 PRSS27Q9BQR3 290 aa12.2□□□□□ -0.46
SNX6-210ENST00000557341 POLR2J2Q9GZM3 115 aaKnown RBP12.2□□□□□ -0.46
SNX6-210ENST00000557341 POLR2J3Q9H1A7 115 aaKnown RBP12.2□□□□□ -0.46
SNX6-210ENST00000557341 MS4A5Q9H3V2 200 aa12.2□□□□□ -0.46
SNX6-210ENST00000557341 MEPEQ9NQ76 525 aaPredicted RBP12.2□□□□□ -0.46
SNX6-210ENST00000557341 BAG5Q9UL15 447 aa12.2□□□□□ -0.46
SNX6-210ENST00000557341 A0A1W2PRG6 482 aa12.19□□□□□ -0.46
SNX6-210ENST00000557341 MCIDASD6RGH6 385 aa12.19□□□□□ -0.46
SNX6-210ENST00000557341 BLOC1S5-TXNDC5H3BN57 136 aa12.19□□□□□ -0.46
SNX6-210ENST00000557341 MRASO14807 208 aa12.19□□□□□ -0.46
SNX6-210ENST00000557341 DHHO43323 396 aa12.19□□□□□ -0.46
SNX6-210ENST00000557341 BCL10O95999 233 aa12.19□□□□□ -0.46
SNX6-210ENST00000557341 NPPAP01160 153 aa12.19□□□□□ -0.46
SNX6-210ENST00000557341 SERPINA5P05154 406 aa12.19□□□□□ -0.46
SNX6-210ENST00000557341 PATE4P0C8F1 98 aa12.19□□□□□ -0.46
SNX6-210ENST00000557341 APEX1P27695 318 aaKnown RBP12.19□□□□□ -0.46
SNX6-210ENST00000557341 THBS2P35442 1172 aa12.19□□□□□ -0.46
SNX6-210ENST00000557341 DAP3P51398 398 aaKnown RBP12.19□□□□□ -0.46
SNX6-210ENST00000557341 RIN1Q13671 783 aa12.19□□□□□ -0.46
SNX6-210ENST00000557341 MAPRE2Q15555 327 aa12.19□□□□□ -0.46
SNX6-210ENST00000557341 NRN1LQ496H8 165 aa12.19□□□□□ -0.46
SNX6-210ENST00000557341 REP15Q6BDI9 236 aa12.19□□□□□ -0.46
SNX6-210ENST00000557341 DEF8Q6ZN54 512 aa12.19□□□□□ -0.46
SNX6-210ENST00000557341 DPPA2Q7Z7J5 298 aa12.19□□□□□ -0.46
SNX6-210ENST00000557341 CALHM3Q86XJ0 350 aa12.19□□□□□ -0.46
SNX6-210ENST00000557341 ZNF584Q8IVC4 421 aa12.19□□□□□ -0.46
SNX6-210ENST00000557341 HPS1Q92902 700 aa12.19□□□□□ -0.46
SNX6-210ENST00000557341 SNX18Q96RF0 628 aa12.19□□□□□ -0.46
SNX6-210ENST00000557341 SH3GL3Q99963 347 aa12.19□□□□□ -0.46
SNX6-210ENST00000557341 SOX7Q9BT81 388 aa12.19□□□□□ -0.46
SNX6-210ENST00000557341 C1orf198Q9H425 327 aa12.19□□□□□ -0.46
SNX6-210ENST00000557341 REV1Q9UBZ9 1251 aa12.19□□□□□ -0.46
SNX6-210ENST00000557341 A0A1W2PPW3 197 aa12.18□□□□□ -0.46
SNX6-210ENST00000557341 CENPBD1B2RD01 187 aa12.18□□□□□ -0.46
SNX6-210ENST00000557341 LILRA1O75019 489 aa12.18□□□□□ -0.46
SNX6-210ENST00000557341 OR5F1O95221 314 aa12.18□□□□□ -0.46
SNX6-210ENST00000557341 IGF2P01344 180 aa12.18□□□□□ -0.46
SNX6-210ENST00000557341 IFNA14P01570 189 aa12.18□□□□□ -0.46
SNX6-210ENST00000557341 QDPRP09417 244 aa12.18□□□□□ -0.46
SNX6-210ENST00000557341 TNFRSF1BP20333 461 aa12.18□□□□□ -0.46
SNX6-210ENST00000557341 IL2RGP31785 369 aa12.18□□□□□ -0.46
SNX6-210ENST00000557341 ALDH3B1P43353 468 aa12.18□□□□□ -0.46
SNX6-210ENST00000557341 ZNF84P51523 738 aa12.18□□□□□ -0.46
SNX6-210ENST00000557341 UGT2B15P54855 530 aa12.18□□□□□ -0.46
SNX6-210ENST00000557341 RPL18Q07020 188 aaKnown RBP12.18□□□□□ -0.46
SNX6-210ENST00000557341 SLC36A2Q495M3 483 aa12.18□□□□□ -0.46
SNX6-210ENST00000557341 TMEM53Q6P2H8 277 aa12.18□□□□□ -0.46
SNX6-210ENST00000557341 LRFN4Q6PJG9 635 aa12.18□□□□□ -0.46
SNX6-210ENST00000557341 UGT2A3Q6UWM9 527 aa12.18□□□□□ -0.46
SNX6-210ENST00000557341 SLC30A7Q8NEW0 376 aa12.18□□□□□ -0.46
SNX6-210ENST00000557341 OR4K5Q8NGD3 323 aa12.18□□□□□ -0.46
SNX6-210ENST00000557341 PFN4Q8NHR9 129 aa12.18□□□□□ -0.46
SNX6-210ENST00000557341 FGFBP3Q8TAT2 258 aa12.18□□□□□ -0.46
SNX6-210ENST00000557341 TMEM255BQ8WV15 326 aa12.18□□□□□ -0.46
SNX6-210ENST00000557341 ASB10Q8WXI3 467 aa12.18□□□□□ -0.46
SNX6-210ENST00000557341 RNF121Q9H920 327 aa12.18□□□□□ -0.46
SNX6-210ENST00000557341 STX18Q9P2W9 335 aaKnown RBP12.18□□□□□ -0.46
SNX6-210ENST00000557341 FZR1Q9UM11 496 aa12.18□□□□□ -0.46
SNX6-210ENST00000557341 SLC22A23A1A5C7 686 aa12.17□□□□□ -0.46
SNX6-210ENST00000557341 SHOX2O60902 331 aaPredicted RBP12.17□□□□□ -0.46
SNX6-210ENST00000557341 SASH3O75995 380 aa12.17□□□□□ -0.46
SNX6-210ENST00000557341 OR7A10O76100 309 aa12.17□□□□□ -0.46
SNX6-210ENST00000557341 F13BP05160 661 aa12.17□□□□□ -0.46
SNX6-210ENST00000557341 THRBP10828 461 aa12.17□□□□□ -0.46
SNX6-210ENST00000557341 ARFIP2P53365 341 aa12.17□□□□□ -0.46
SNX6-210ENST00000557341 KLF10Q13118 480 aa12.17□□□□□ -0.46
SNX6-210ENST00000557341 MAD2L1BPQ15013 274 aaPredicted RBP12.17□□□□□ -0.46
SNX6-210ENST00000557341 TRIP10Q15642 601 aa12.17□□□□□ -0.46
SNX6-210ENST00000557341 HIST3H3Q16695 136 aa12.17□□□□□ -0.46
SNX6-210ENST00000557341 TBC1D28Q2M2D7 210 aa12.17□□□□□ -0.46
SNX6-210ENST00000557341 CR1LQ2VPA4 569 aa12.17□□□□□ -0.46
SNX6-210ENST00000557341 LRRC23Q53EV4 343 aaPredicted RBP12.17□□□□□ -0.46
SNX6-210ENST00000557341 RGS7BPQ6MZT1 257 aaPredicted RBP12.17□□□□□ -0.46
SNX6-210ENST00000557341 SLC16A14Q7RTX9 510 aa12.17□□□□□ -0.46
SNX6-210ENST00000557341 NKAIN4Q8IVV8 208 aa12.17□□□□□ -0.46
SNX6-210ENST00000557341 LINC01356Q8N9X3 169 aa12.17□□□□□ -0.46
SNX6-210ENST00000557341 PCYOX1LQ8NBM8 494 aa12.17□□□□□ -0.46
SNX6-210ENST00000557341 RBM15BQ8NDT2 890 aaKnown RBP12.17□□□□□ -0.46
SNX6-210ENST00000557341 TMEM239Q8WW34 195 aa12.17□□□□□ -0.46
SNX6-210ENST00000557341 MCHR2Q969V1 340 aa12.17□□□□□ -0.46
SNX6-210ENST00000557341 SGTBQ96EQ0 304 aa12.17□□□□□ -0.46
SNX6-210ENST00000557341 ZNF347Q96SE7 839 aa12.17□□□□□ -0.46
SNX6-210ENST00000557341 SEPHS2Q99611 448 aa12.17□□□□□ -0.46
SNX6-210ENST00000557341 CDH20Q9HBT6 801 aa12.17□□□□□ -0.46
SNX6-210ENST00000557341 INIPQ9NRY2 104 aa12.17□□□□□ -0.46
SNX6-210ENST00000557341 C20orf141Q9NUB4 165 aa12.17□□□□□ -0.46
SNX6-210ENST00000557341 FGFR1OP2Q9NVK5 253 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms