RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 PCDHAC1Q9H158 963 aa13.65□□□□□ -0.22
TUBB3-213ENST00000557262 TMEM38BQ9NVV0 291 aa13.65□□□□□ -0.22
TUBB3-213ENST00000557262 DUSP13Q9UII6 198 aa13.65□□□□□ -0.22
TUBB3-213ENST00000557262 SLC22A23A1A5C7 686 aa13.64□□□□□ -0.23
TUBB3-213ENST00000557262 HMGB1P1B2RPK0 211 aaPredicted RBP13.64□□□□□ -0.23
TUBB3-213ENST00000557262 BLOC1S5-TXNDC5H3BN57 136 aa13.64□□□□□ -0.23
TUBB3-213ENST00000557262 KPNA4O00629 521 aaPredicted RBP13.64□□□□□ -0.23
TUBB3-213ENST00000557262 HPXP02790 462 aa13.64□□□□□ -0.23
TUBB3-213ENST00000557262 QDPRP09417 244 aa13.64□□□□□ -0.23
TUBB3-213ENST00000557262 PGA4P0DJD7 388 aa13.64□□□□□ -0.23
TUBB3-213ENST00000557262 PGA3P0DJD8 388 aa13.64□□□□□ -0.23
TUBB3-213ENST00000557262 UMPSP11172 480 aa13.64□□□□□ -0.23
TUBB3-213ENST00000557262 GZMMP51124 257 aa13.64□□□□□ -0.23
TUBB3-213ENST00000557262 TMEM33P57088 247 aa13.64□□□□□ -0.23
TUBB3-213ENST00000557262 SRSF2Q01130 221 aaKnown RBP13.64□□□□□ -0.23
TUBB3-213ENST00000557262 MELKQ14680 651 aa13.64□□□□□ -0.23
TUBB3-213ENST00000557262 VMACQ2NL98 169 aa13.64□□□□□ -0.23
TUBB3-213ENST00000557262 METTL21CQ5VZV1 264 aa13.64□□□□□ -0.23
TUBB3-213ENST00000557262 CCDC80Q76M96 950 aa13.64□□□□□ -0.23
TUBB3-213ENST00000557262 DPPA2Q7Z7J5 298 aa13.64□□□□□ -0.23
TUBB3-213ENST00000557262 TSPYL5Q86VY4 417 aaPredicted RBP13.64□□□□□ -0.23
TUBB3-213ENST00000557262 SH3GL3Q99963 347 aa13.64□□□□□ -0.23
TUBB3-213ENST00000557262 PRSS27Q9BQR3 290 aa13.64□□□□□ -0.23
TUBB3-213ENST00000557262 RNF121Q9H920 327 aa13.64□□□□□ -0.23
TUBB3-213ENST00000557262 MYEF2Q9P2K5 600 aaKnown RBP13.64□□□□□ -0.23
TUBB3-213ENST00000557262 ZNF346Q9UL40 294 aaKnown RBP13.64□□□□□ -0.23
TUBB3-213ENST00000557262 FZR1Q9UM11 496 aa13.64□□□□□ -0.23
TUBB3-213ENST00000557262 B4DSR2 109 aa13.63□□□□□ -0.23
TUBB3-213ENST00000557262 PTHP01270 115 aa13.63□□□□□ -0.23
TUBB3-213ENST00000557262 IGHG1P01857 330 aa13.63□□□□□ -0.23
TUBB3-213ENST00000557262 PCMT1P22061 227 aa13.63□□□□□ -0.23
TUBB3-213ENST00000557262 ACHEP22303 614 aa13.63□□□□□ -0.23
TUBB3-213ENST00000557262 SRP14P37108 136 aaKnown RBP13.63□□□□□ -0.23
TUBB3-213ENST00000557262 GPR6P46095 362 aaPredicted RBP13.63□□□□□ -0.23
TUBB3-213ENST00000557262 DVL1P1P54792 670 aaPredicted RBP13.63□□□□□ -0.23
TUBB3-213ENST00000557262 SELENOVP59797 346 aa13.63□□□□□ -0.23
TUBB3-213ENST00000557262 CYLC2Q14093 348 aaPredicted RBP13.63□□□□□ -0.23
TUBB3-213ENST00000557262 CCNIQ14094 377 aa13.63□□□□□ -0.23
TUBB3-213ENST00000557262 MAD2L1BPQ15013 274 aaPredicted RBP13.63□□□□□ -0.23
TUBB3-213ENST00000557262 SLC36A2Q495M3 483 aa13.63□□□□□ -0.23
TUBB3-213ENST00000557262 RGS7BPQ6MZT1 257 aaPredicted RBP13.63□□□□□ -0.23
TUBB3-213ENST00000557262 NANOGP8Q6NSW7 305 aa13.63□□□□□ -0.23
TUBB3-213ENST00000557262 TMEM53Q6P2H8 277 aa13.63□□□□□ -0.23
TUBB3-213ENST00000557262 RFLNBQ8N5W9 214 aa13.63□□□□□ -0.23
TUBB3-213ENST00000557262 SLC30A7Q8NEW0 376 aa13.63□□□□□ -0.23
TUBB3-213ENST00000557262 MCHR2Q969V1 340 aa13.63□□□□□ -0.23
TUBB3-213ENST00000557262 SH3GL1Q99961 368 aa13.63□□□□□ -0.23
TUBB3-213ENST00000557262 SIKE1Q9BRV8 207 aa13.63□□□□□ -0.23
TUBB3-213ENST00000557262 C1orf198Q9H425 327 aa13.63□□□□□ -0.23
TUBB3-213ENST00000557262 NANOGQ9H9S0 305 aa13.63□□□□□ -0.23
TUBB3-213ENST00000557262 NPHS2Q9NP85 383 aa13.63□□□□□ -0.23
TUBB3-213ENST00000557262 MEPEQ9NQ76 525 aaPredicted RBP13.63□□□□□ -0.23
TUBB3-213ENST00000557262 A0A1W2PPW3 197 aa13.62□□□□□ -0.23
TUBB3-213ENST00000557262 A0A1W2PRG6 482 aa13.62□□□□□ -0.23
TUBB3-213ENST00000557262 MGRN1O60291 552 aa13.62□□□□□ -0.23
TUBB3-213ENST00000557262 EDF1O60869 148 aaKnown RBP13.62□□□□□ -0.23
TUBB3-213ENST00000557262 MT-ND1P03886 318 aa13.62□□□□□ -0.23
TUBB3-213ENST00000557262 NAT2P11245 290 aa13.62□□□□□ -0.23
TUBB3-213ENST00000557262 FUT1P19526 365 aa13.62□□□□□ -0.23
TUBB3-213ENST00000557262 CLRN1P58418 232 aa13.62□□□□□ -0.23
TUBB3-213ENST00000557262 MRPS11P82912 194 aaKnown RBP13.62□□□□□ -0.23
TUBB3-213ENST00000557262 HIST3H3Q16695 136 aa13.62□□□□□ -0.23
TUBB3-213ENST00000557262 NRN1LQ496H8 165 aa13.62□□□□□ -0.23
TUBB3-213ENST00000557262 SLC16A14Q7RTX9 510 aa13.62□□□□□ -0.23
TUBB3-213ENST00000557262 NANOGNBQ7Z5D8 188 aa13.62□□□□□ -0.23
TUBB3-213ENST00000557262 CARM1Q86X55 608 aa13.62□□□□□ -0.23
TUBB3-213ENST00000557262 OR4K5Q8NGD3 323 aa13.62□□□□□ -0.23
TUBB3-213ENST00000557262 OR1J2Q8NGS2 313 aa13.62□□□□□ -0.23
TUBB3-213ENST00000557262 MRPL13Q9BYD1 178 aaKnown RBP13.62□□□□□ -0.23
TUBB3-213ENST00000557262 RACGAP1Q9H0H5 632 aa13.62□□□□□ -0.23
TUBB3-213ENST00000557262 CDH20Q9HBT6 801 aa13.62□□□□□ -0.23
TUBB3-213ENST00000557262 TAAR3PQ9P1P4 343 aa13.62□□□□□ -0.23
TUBB3-213ENST00000557262 GPR160Q9UJ42 338 aa13.62□□□□□ -0.23
TUBB3-213ENST00000557262 SH3GLB1Q9Y371 365 aa13.62□□□□□ -0.23
TUBB3-213ENST00000557262 ANK2Q01484 3957 aa13.62□□□□□ -0.23
TUBB3-213ENST00000557262 A0A0G2JND7 137 aa13.61□□□□□ -0.23
TUBB3-213ENST00000557262 CENPBD1B2RD01 187 aa13.61□□□□□ -0.23
TUBB3-213ENST00000557262 FBP2O00757 339 aa13.61□□□□□ -0.23
TUBB3-213ENST00000557262 TCF21O43680 179 aa13.61□□□□□ -0.23
TUBB3-213ENST00000557262 F13BP05160 661 aa13.61□□□□□ -0.23
TUBB3-213ENST00000557262 FAM157BP0CG42 384 aa13.61□□□□□ -0.23
TUBB3-213ENST00000557262 CCL2P13500 99 aa13.61□□□□□ -0.23
TUBB3-213ENST00000557262 ZNF250P15622 560 aa13.61□□□□□ -0.23
TUBB3-213ENST00000557262 RBM34P42696 430 aaKnown RBP13.61□□□□□ -0.23
TUBB3-213ENST00000557262 RAD52P43351 418 aa13.61□□□□□ -0.23
TUBB3-213ENST00000557262 ZNF84P51523 738 aa13.61□□□□□ -0.23
TUBB3-213ENST00000557262 CRYBA2P53672 197 aa13.61□□□□□ -0.23
TUBB3-213ENST00000557262 UGT2B15P54855 530 aa13.61□□□□□ -0.23
TUBB3-213ENST00000557262 PLP2Q04941 152 aa13.61□□□□□ -0.23
TUBB3-213ENST00000557262 RPL18Q07020 188 aaKnown RBP13.61□□□□□ -0.23
TUBB3-213ENST00000557262 NKPD1Q17RQ9 610 aa13.61□□□□□ -0.23
TUBB3-213ENST00000557262 HDXQ7Z353 690 aa13.61□□□□□ -0.23
TUBB3-213ENST00000557262 PAQR4Q8N4S7 273 aaPredicted RBP13.61□□□□□ -0.23
TUBB3-213ENST00000557262 CLDND2Q8NHS1 167 aa13.61□□□□□ -0.23
TUBB3-213ENST00000557262 SYNPRQ8TBG9 265 aa13.61□□□□□ -0.23
TUBB3-213ENST00000557262 C11orf40Q8WZ69 217 aa13.61□□□□□ -0.23
TUBB3-213ENST00000557262 YIPF5Q969M3 257 aa13.61□□□□□ -0.23
TUBB3-213ENST00000557262 ZNF347Q96SE7 839 aa13.61□□□□□ -0.23
TUBB3-213ENST00000557262 ECSITQ9BQ95 431 aa13.61□□□□□ -0.23
TUBB3-213ENST00000557262 POLR2J2Q9GZM3 115 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms