RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 AP3S2P59780 193 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 KRTAP10-6P60371 365 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-246ENST00000557030 ARF3P61204 181 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-246ENST00000557030 SNRPD2P62316 118 aaKnown RBP4.24□□□□□ -1.73
ATXN3-246ENST00000557030 ARF1P84077 181 aaKnown RBP4.24□□□□□ -1.73
ATXN3-246ENST00000557030 MC1RQ01726 317 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 ST3GAL3Q11203 375 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 TMEM115Q12893 351 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-246ENST00000557030 SNTA1Q13424 505 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 P2RY14Q15391 338 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 FCN2Q15485 313 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 GRK1Q15835 563 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 HSPB2Q16082 182 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 NTRK2Q16620 822 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 DECR1Q16698 335 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 IDNKQ5T6J7 187 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 HENMT1Q5T8I9 393 aaKnown RBP4.24□□□□□ -1.73
ATXN3-246ENST00000557030 OR2G6Q5TZ20 316 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 KHDRBS2Q5VWX1 349 aaKnown RBP4.24□□□□□ -1.73
ATXN3-246ENST00000557030 SLC22A10Q63ZE4 541 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 GPR139Q6DWJ6 353 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 FAM122CQ6P4D5 195 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 TNFAIP8L2Q6P589 184 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-246ENST00000557030 TMEM220Q6QAJ8 160 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 TMEM64Q6YI46 380 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 DPPA4Q7L190 304 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 ZER1Q7Z7L7 766 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 ADGRD2Q7Z7M1 963 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 OAFQ86UD1 273 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 GPAT4Q86UL3 456 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 IQCHQ86VS3 1027 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 COMMD7Q86VX2 200 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 NUDT13Q86X67 352 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 TMEM25Q86YD3 366 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 SLC38A6Q8IZM9 456 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 OR8H3Q8N146 312 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 TOMM5Q8N4H5 51 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 SYT14Q8NB59 555 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 MORN4Q8NDC4 146 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 OR8K5Q8NH50 307 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 NXPE2Q96DL1 559 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 TCEAL4Q96EI5 215 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 PERPQ96FX8 193 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 CMTM3Q96MX0 182 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 ZNF578Q96N58 590 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-246ENST00000557030 ERMAPQ96PL5 475 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-246ENST00000557030 SECISBP2Q96T21 854 aaKnown RBP4.24□□□□□ -1.73
ATXN3-246ENST00000557030 CDX2Q99626 313 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-246ENST00000557030 ARHGDIGQ99819 225 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 C17orf62Q9BQA9 187 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 AIF1LQ9BQI0 150 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 TMED9Q9BVK6 235 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 RIOK2Q9BVS4 552 aaKnown RBP4.24□□□□□ -1.73
ATXN3-246ENST00000557030 FAIM2Q9BWQ8 316 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 ABCG5Q9H222 651 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 PPA2Q9H2U2 334 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 RHBGQ9H310 441 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 FN3KQ9H479 309 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 DPEP2Q9H4A9 486 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 OSGEPL1Q9H4B0 414 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 RERGLQ9H628 205 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 C11orf49Q9H6J7 331 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 TBC1D17Q9HA65 648 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 MED9Q9NWA0 146 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 HCFC1R1Q9NWW0 138 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 LYARQ9NX58 379 aaKnown RBP4.24□□□□□ -1.73
ATXN3-246ENST00000557030 KLHL28Q9NXS3 571 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 MAT2BQ9NZL9 334 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 ZNF624Q9P2J8 865 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-246ENST00000557030 MALT1Q9UDY8 824 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 NDRG3Q9UGV2 375 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 KIF25Q9UIL4 384 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 ZNF222Q9UK12 451 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 CCL26Q9Y258 94 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 MAB21L2Q9Y586 359 aa4.24□□□□□ -1.73
ATXN3-246ENST00000557030 A0A1B0GTQ1 180 aa4.23□□□□□ -1.73
ATXN3-246ENST00000557030 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-246ENST00000557030 A0A1B0GW55 424 aa4.23□□□□□ -1.73
ATXN3-246ENST00000557030 GSAPA4D1B5 854 aa4.23□□□□□ -1.73
ATXN3-246ENST00000557030 HIDE1A8MVS5 230 aa4.23□□□□□ -1.73
ATXN3-246ENST00000557030 LRRN3E7EW58 273 aa4.23□□□□□ -1.73
ATXN3-246ENST00000557030 PGRMC2O15173 223 aa4.23□□□□□ -1.73
ATXN3-246ENST00000557030 CTDSPLO15194 276 aa4.23□□□□□ -1.73
ATXN3-246ENST00000557030 SURF4O15260 269 aa4.23□□□□□ -1.73
ATXN3-246ENST00000557030 NDUFS4O43181 175 aa4.23□□□□□ -1.73
ATXN3-246ENST00000557030 GSTZ1O43708 216 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-246ENST00000557030 MTX2O75431 263 aa4.23□□□□□ -1.73
ATXN3-246ENST00000557030 TSPAN9O75954 239 aa4.23□□□□□ -1.73
ATXN3-246ENST00000557030 UBL3O95164 117 aa4.23□□□□□ -1.73
ATXN3-246ENST00000557030 OR5F1O95221 314 aa4.23□□□□□ -1.73
ATXN3-246ENST00000557030 PPP1R3DO95685 299 aa4.23□□□□□ -1.73
ATXN3-246ENST00000557030 PAHP00439 452 aa4.23□□□□□ -1.73
ATXN3-246ENST00000557030 TCRBP04435 133 aa4.23□□□□□ -1.73
ATXN3-246ENST00000557030 IFNA16P05015 189 aa4.23□□□□□ -1.73
ATXN3-246ENST00000557030 DUX4L2P0CJ85 424 aa4.23□□□□□ -1.73
ATXN3-246ENST00000557030 DUX4L3P0CJ86 424 aa4.23□□□□□ -1.73
ATXN3-246ENST00000557030 DUX4L4P0CJ87 422 aa4.23□□□□□ -1.73
ATXN3-246ENST00000557030 DUX4L5P0CJ88 424 aa4.23□□□□□ -1.73
ATXN3-246ENST00000557030 DUX4L6P0CJ89 424 aa4.23□□□□□ -1.73
ATXN3-246ENST00000557030 DUX4L7P0CJ90 424 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms