RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 MOGAT1Q96PD6 335 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 VRK1Q99986 396 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-222ENST00000556768 HOPXQ9BPY8 73 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-222ENST00000556768 PCDHAC1Q9H158 963 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 EFCAB1Q9HAE3 211 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 MED29Q9NX70 200 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 H2AFY2Q9P0M6 372 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-222ENST00000556768 STX18Q9P2W9 335 aaKnown RBP6.38□□□□□ -1.39
SCFD1-222ENST00000556768 ELOVL7A1L3X0 281 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 HTR3EA5X5Y0 456 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 MCIDASD6RGH6 385 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 GSTA4O15217 222 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 NDUFS7O75251 213 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 PDE5AO76074 875 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 OR4A8P0C604 315 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 CECR9P0C854 216 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 THRBP10828 461 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 NR2C1P13056 603 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 HLA-DOBP13765 273 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 SLC25A16P16260 332 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 HOXB4P17483 251 aaPredicted RBP6.37□□□□□ -1.39
SCFD1-222ENST00000556768 KDELR2P33947 212 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 MDH1P40925 334 aaKnown RBP6.37□□□□□ -1.39
SCFD1-222ENST00000556768 RBM34P42696 430 aaKnown RBP6.37□□□□□ -1.39
SCFD1-222ENST00000556768 IDH3GP51553 393 aaPredicted RBP6.37□□□□□ -1.39
SCFD1-222ENST00000556768 BIDP55957 195 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 SLC25A3Q00325 362 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 GALK2Q01415 458 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 NAAAQ02083 359 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 ZNF74Q16587 644 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 LRRC23Q53EV4 343 aaPredicted RBP6.37□□□□□ -1.39
SCFD1-222ENST00000556768 GKAP1Q5VSY0 366 aaPredicted RBP6.37□□□□□ -1.39
SCFD1-222ENST00000556768 FDX2Q6P4F2 183 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 DEF8Q6ZN54 512 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 SLC35D2Q76EJ3 337 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 RRM2BQ7LG56 351 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 NANOGNBQ7Z5D8 188 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 CARM1Q86X55 608 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 RBM45Q8IUH3 476 aaKnown RBP6.37□□□□□ -1.39
SCFD1-222ENST00000556768 CDK20Q8IZL9 346 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 TMEM123Q8N131 208 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 GPR32P1Q8NGA4 272 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 OR6X1Q8NH79 312 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 CMTM5Q96DZ9 223 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 SLC25A44Q96H78 314 aaPredicted RBP6.37□□□□□ -1.39
SCFD1-222ENST00000556768 TXNDC15Q96J42 360 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 WFDC6Q9BQY6 131 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 RSPO3Q9BXY4 272 aaPredicted RBP6.37□□□□□ -1.39
SCFD1-222ENST00000556768 RAB1BQ9H0U4 201 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 KCNN2Q9H2S1 579 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 CCDC134Q9H6E4 229 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 CRNNQ9UBG3 495 aaPredicted RBP6.37□□□□□ -1.39
SCFD1-222ENST00000556768 CADP27708 2225 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 DSCAMO60469 2012 aa6.37□□□□□ -1.39
SCFD1-222ENST00000556768 LRRN3E7EW58 273 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 ATP8B1O43520 1251 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 TLX2O43763 284 aaPredicted RBP6.36□□□□□ -1.39
SCFD1-222ENST00000556768 MGRN1O60291 552 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 UBL3O95164 117 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 OR5F1O95221 314 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 HPRP00739 348 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 PTHP01270 115 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 IGLV1-44P01699 117 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 IGHG1P01857 330 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 MT-ND1P03886 318 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 OR8G3PP0DMU2 310 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 FUT1P19526 365 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 NPR2P20594 1047 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 DAP3P51398 398 aaKnown RBP6.36□□□□□ -1.39
SCFD1-222ENST00000556768 CLRN1P58418 232 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 SELENOVP59797 346 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 RAB1AP62820 205 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 SELENOWP63302 87 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 TUBA1BP68363 451 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 TUBA4AP68366 448 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 PIGFQ07326 219 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 ST3GAL3Q11203 375 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 ZP4Q12836 540 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 TAF11Q15544 211 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 CYBRD1Q53TN4 286 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 TUBA1AQ71U36 451 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 LINGO2Q7L985 606 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 DPPA2Q7Z7J5 298 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 CALHM3Q86XJ0 350 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 MAPK1IP1LQ8NDC0 245 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 NUP37Q8NFH4 326 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 TMEM239Q8WW34 195 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 ZNF583Q96ND8 569 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 FOXB1Q99853 325 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 PLK3Q9H4B4 646 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 MYOZ1Q9NP98 299 aaPredicted RBP6.36□□□□□ -1.39
SCFD1-222ENST00000556768 GLTPQ9NZD2 209 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 RIMS3Q9UJD0 308 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 MED31Q9Y3C7 131 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 CMAHPQ9Y471 501 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 FAM220BPB1ANY3 271 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 INAFM1C9JVW0 142 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 NDUFS8O00217 210 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 SEC14L2O76054 403 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 IGF2P01344 180 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms