RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 NAGSQ8N159 534 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 ACOT4Q8N9L9 421 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 PAQR8Q8TEZ7 354 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 MITD1Q8WV92 249 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 CYGBQ8WWM9 190 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 GEMIN6Q8WXD5 167 aaKnown RBP4.59□□□□□ -1.67
SRP54-211ENST00000556445 SLC35G5Q96KT7 338 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 SFXN2Q96NB2 322 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 OR6C1Q96RD1 312 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 EPYCQ99645 322 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 ZNF717Q9BY31 904 aaPredicted RBP4.59□□□□□ -1.67
SRP54-211ENST00000556445 GABARAPL1Q9H0R8 117 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 DNTTIP1Q9H147 329 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 ING2Q9H160 280 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 C6orf106Q9H6K1 298 aaPredicted RBP4.59□□□□□ -1.67
SRP54-211ENST00000556445 CACYBPQ9HB71 228 aaKnown RBP4.59□□□□□ -1.67
SRP54-211ENST00000556445 RAB9BQ9NP90 201 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 A4GALTQ9NPC4 353 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 THSD1Q9NS62 852 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 GPR173Q9NS66 373 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 ANKRD10Q9NXR5 420 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 P2RX2Q9UBL9 471 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 OR14J1Q9UGF5 321 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 APOBEC3BQ9UH17 382 aaKnown RBP4.59□□□□□ -1.67
SRP54-211ENST00000556445 UTS2RQ9UKP6 389 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 FOXJ3Q9UPW0 622 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 IFT52Q9Y366 437 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 SIRT4Q9Y6E7 314 aaPredicted RBP4.59□□□□□ -1.67
SRP54-211ENST00000556445 ZNF780BQ9Y6R6 833 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 V9GYQ6 96 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 MDC1Q14676 2089 aaKnown RBP4.58□□□□□ -1.68
SRP54-211ENST00000556445 ARRDC5A6NEK1 342 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 SHISA7A6NL88 538 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 VGLL3A8MV65 326 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 H3BNH8 94 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 ZNF701M0R085 212 aaPredicted RBP4.58□□□□□ -1.68
SRP54-211ENST00000556445 PDLIM1O00151 329 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 UPK1AO00322 258 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 BTN3A3O00478 584 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 EMC8O43402 210 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 XRCC3O43542 346 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 OR10H2O60403 315 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 SRPX2O60687 465 aaPredicted RBP4.58□□□□□ -1.68
SRP54-211ENST00000556445 MRPS14O60783 128 aaKnown RBP4.58□□□□□ -1.68
SRP54-211ENST00000556445 CBR3O75828 277 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 CLPXO76031 633 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 TBX6O95947 436 aaPredicted RBP4.58□□□□□ -1.68
SRP54-211ENST00000556445 SEMG1P04279 462 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 IFNW1P05000 195 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 PROS1P07225 676 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 PNMTP11086 282 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 ETS2P15036 469 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 POLR2CP19387 275 aaPredicted RBP4.58□□□□□ -1.68
SRP54-211ENST00000556445 SRMP19623 302 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 TUBG1P23258 451 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 DPP4P27487 766 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 PEBP1P30086 187 aaKnown RBP4.58□□□□□ -1.68
SRP54-211ENST00000556445 DCTP40126 519 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 PTGFRP43088 359 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 ALDH3B1P43353 468 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 HAAOP46952 286 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 RGS19P49795 217 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 PPT1P50897 306 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 NCBP2P52298 156 aaKnown RBP eCLIP4.58□□□□□ -1.68
SRP54-211ENST00000556445 BLVRAP53004 296 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 CRISP3P54108 245 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 ADARB1P78563 741 aaKnown RBP4.58□□□□□ -1.68
SRP54-211ENST00000556445 EEF1A2Q05639 463 aaKnown RBP4.58□□□□□ -1.68
SRP54-211ENST00000556445 RASGEF1BQ0VAM2 473 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 BIKQ13323 160 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 GPR18Q14330 331 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 FZD2Q14332 565 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 TWIST1Q15672 202 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 ACKR1Q16570 336 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 ZNF260Q3ZCT1 412 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 LIN52Q52LA3 116 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 OTUD3Q5T2D3 398 aaPredicted RBP4.58□□□□□ -1.68
SRP54-211ENST00000556445 NSUN5P2Q63ZY6 315 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 ASPHD2Q6ICH7 369 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 OR52E8Q6IFG1 317 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 MFSD12Q6NUT3 480 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 SLC48A1Q6P1K1 146 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 CEACAM20Q6UY09 585 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 C6orf120Q7Z4R8 191 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 CCDC190Q86UF4 302 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 RNF130Q86XS8 419 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 PAQR4Q8N4S7 273 aaPredicted RBP4.58□□□□□ -1.68
SRP54-211ENST00000556445 LINC00471Q8N535 108 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 ZNF565Q8N9K5 539 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 OR1J2Q8NGS2 313 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 OR2AJ1Q8NGZ0 328 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 TRMT10AQ8TBZ6 339 aaKnown RBP4.58□□□□□ -1.68
SRP54-211ENST00000556445 SPPL2AQ8TCT8 520 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 PROX1Q92786 737 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 HAS2Q92819 552 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 GGHQ92820 318 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 ATOH1Q92858 354 aaPredicted RBP4.58□□□□□ -1.68
SRP54-211ENST00000556445 CIDECQ96AQ7 238 aaPredicted RBP4.58□□□□□ -1.68
SRP54-211ENST00000556445 EXOSC8Q96B26 276 aaKnown RBP4.58□□□□□ -1.68
SRP54-211ENST00000556445 DGCR14Q96DF8 476 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms