RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 LRP11Q86VZ4 500 aa19.44■□□□□ 0.7
ACTN1-220ENST00000556433 HPS1Q92902 700 aa19.44■□□□□ 0.7
ACTN1-220ENST00000556433 SNX18Q96RF0 628 aa19.44■□□□□ 0.7
ACTN1-220ENST00000556433 SH3GL1Q99961 368 aa19.44■□□□□ 0.7
ACTN1-220ENST00000556433 SH3GL3Q99963 347 aa19.44■□□□□ 0.7
ACTN1-220ENST00000556433 PRSS27Q9BQR3 290 aa19.44■□□□□ 0.7
ACTN1-220ENST00000556433 VIPAS39Q9H9C1 493 aa19.44■□□□□ 0.7
ACTN1-220ENST00000556433 TMEM38BQ9NVV0 291 aa19.44■□□□□ 0.7
ACTN1-220ENST00000556433 FZR1Q9UM11 496 aa19.44■□□□□ 0.7
ACTN1-220ENST00000556433 SH3GLB1Q9Y371 365 aa19.44■□□□□ 0.7
ACTN1-220ENST00000556433 FARS2O95363 451 aaKnown RBP19.43■□□□□ 0.7
ACTN1-220ENST00000556433 QDPRP09417 244 aa19.43■□□□□ 0.7
ACTN1-220ENST00000556433 ALDH3B1P43353 468 aa19.43■□□□□ 0.7
ACTN1-220ENST00000556433 SEC24CP53992 1094 aa19.43■□□□□ 0.7
ACTN1-220ENST00000556433 TRIP10Q15642 601 aa19.43■□□□□ 0.7
ACTN1-220ENST00000556433 RABL3Q5HYI8 236 aa19.43■□□□□ 0.7
ACTN1-220ENST00000556433 CARM1Q86X55 608 aa19.43■□□□□ 0.7
ACTN1-220ENST00000556433 ZNF584Q8IVC4 421 aa19.43■□□□□ 0.7
ACTN1-220ENST00000556433 ECSITQ9BQ95 431 aa19.43■□□□□ 0.7
ACTN1-220ENST00000556433 RNF121Q9H920 327 aa19.43■□□□□ 0.7
ACTN1-220ENST00000556433 MEPEQ9NQ76 525 aaPredicted RBP19.43■□□□□ 0.7
ACTN1-220ENST00000556433 SLC7A8Q9UHI5 535 aa19.43■□□□□ 0.7
ACTN1-220ENST00000556433 DUSP13Q9UII6 198 aa19.43■□□□□ 0.7
ACTN1-220ENST00000556433 PGA4P0DJD7 388 aa19.42■□□□□ 0.7
ACTN1-220ENST00000556433 PGA3P0DJD8 388 aa19.42■□□□□ 0.7
ACTN1-220ENST00000556433 CLRN1P58418 232 aa19.42■□□□□ 0.7
ACTN1-220ENST00000556433 MAD2L1BPQ15013 274 aaPredicted RBP19.42■□□□□ 0.7
ACTN1-220ENST00000556433 KRTAP24-1Q3LI83 254 aa19.42■□□□□ 0.7
ACTN1-220ENST00000556433 LINC01356Q8N9X3 169 aa19.42■□□□□ 0.7
ACTN1-220ENST00000556433 LRRC58Q96CX6 371 aa19.42■□□□□ 0.7
ACTN1-220ENST00000556433 TMEM120AQ9BXJ8 343 aa19.42■□□□□ 0.7
ACTN1-220ENST00000556433 MYEF2Q9P2K5 600 aaKnown RBP19.42■□□□□ 0.7
ACTN1-220ENST00000556433 IGHG1P01857 330 aa19.41■□□□□ 0.7
ACTN1-220ENST00000556433 HPXP02790 462 aa19.41■□□□□ 0.7
ACTN1-220ENST00000556433 MT-ND1P03886 318 aa19.41■□□□□ 0.7
ACTN1-220ENST00000556433 FUT1P19526 365 aa19.41■□□□□ 0.7
ACTN1-220ENST00000556433 TNFRSF1BP20333 461 aa19.41■□□□□ 0.7
ACTN1-220ENST00000556433 COL8A2P25067 703 aa19.41■□□□□ 0.7
ACTN1-220ENST00000556433 TAS2R41P59536 307 aa19.41■□□□□ 0.7
ACTN1-220ENST00000556433 MMEL1Q495T6 779 aa19.41■□□□□ 0.7
ACTN1-220ENST00000556433 ELFN2Q5R3F8 820 aa19.41■□□□□ 0.7
ACTN1-220ENST00000556433 TMEM53Q6P2H8 277 aa19.41■□□□□ 0.7
ACTN1-220ENST00000556433 CALHM3Q86XJ0 350 aa19.41■□□□□ 0.7
ACTN1-220ENST00000556433 NKAIN4Q8IVV8 208 aa19.41■□□□□ 0.7
ACTN1-220ENST00000556433 SLC30A7Q8NEW0 376 aa19.41■□□□□ 0.7
ACTN1-220ENST00000556433 OR4K5Q8NGD3 323 aa19.41■□□□□ 0.7
ACTN1-220ENST00000556433 MCHR2Q969V1 340 aa19.41■□□□□ 0.7
ACTN1-220ENST00000556433 ZNF347Q96SE7 839 aa19.41■□□□□ 0.7
ACTN1-220ENST00000556433 ARGLU1Q9NWB6 273 aaPredicted RBP19.41■□□□□ 0.7
ACTN1-220ENST00000556433 BAG5Q9UL15 447 aa19.41■□□□□ 0.7
ACTN1-220ENST00000556433 A0A1W2PPW3 197 aa19.4■□□□□ 0.7
ACTN1-220ENST00000556433 A0A1W2PRG6 482 aa19.4■□□□□ 0.7
ACTN1-220ENST00000556433 F13BP05160 661 aa19.4■□□□□ 0.7
ACTN1-220ENST00000556433 MYBPC1Q00872 1141 aa19.4■□□□□ 0.7
ACTN1-220ENST00000556433 SRSF2Q01130 221 aaKnown RBP19.4■□□□□ 0.7
ACTN1-220ENST00000556433 RUNX1T1Q06455 604 aa19.4■□□□□ 0.7
ACTN1-220ENST00000556433 RPL18Q07020 188 aaKnown RBP19.4■□□□□ 0.7
ACTN1-220ENST00000556433 REP15Q6BDI9 236 aa19.4■□□□□ 0.7
ACTN1-220ENST00000556433 DEF8Q6ZN54 512 aa19.4■□□□□ 0.7
ACTN1-220ENST00000556433 SLC16A14Q7RTX9 510 aa19.4■□□□□ 0.7
ACTN1-220ENST00000556433 OR8J3Q8NGG0 315 aa19.4■□□□□ 0.7
ACTN1-220ENST00000556433 PFN4Q8NHR9 129 aa19.4■□□□□ 0.7
ACTN1-220ENST00000556433 RDH5Q92781 318 aa19.4■□□□□ 0.7
ACTN1-220ENST00000556433 SGTBQ96EQ0 304 aa19.4■□□□□ 0.7
ACTN1-220ENST00000556433 TMEFF2Q9UIK5 374 aaPredicted RBP19.4■□□□□ 0.7
ACTN1-220ENST00000556433 RIMS3Q9UJD0 308 aa19.4■□□□□ 0.7
ACTN1-220ENST00000556433 SVEP1Q4LDE5 3571 aa19.39■□□□□ 0.69
ACTN1-220ENST00000556433 SLC22A23A1A5C7 686 aa19.39■□□□□ 0.69
ACTN1-220ENST00000556433 MCIDASD6RGH6 385 aa19.39■□□□□ 0.69
ACTN1-220ENST00000556433 SHOX2O60902 331 aaPredicted RBP19.39■□□□□ 0.69
ACTN1-220ENST00000556433 OR7A10O76100 309 aa19.39■□□□□ 0.69
ACTN1-220ENST00000556433 FAM157BP0CG42 384 aa19.39■□□□□ 0.69
ACTN1-220ENST00000556433 CCL2P13500 99 aa19.39■□□□□ 0.69
ACTN1-220ENST00000556433 AQP2P41181 271 aa19.39■□□□□ 0.69
ACTN1-220ENST00000556433 RBM34P42696 430 aaKnown RBP19.39■□□□□ 0.69
ACTN1-220ENST00000556433 ZNF84P51523 738 aa19.39■□□□□ 0.69
ACTN1-220ENST00000556433 UGT2B15P54855 530 aa19.39■□□□□ 0.69
ACTN1-220ENST00000556433 CDH15P55291 814 aa19.39■□□□□ 0.69
ACTN1-220ENST00000556433 PIN1Q13526 163 aaPredicted RBP19.39■□□□□ 0.69
ACTN1-220ENST00000556433 CCNIQ14094 377 aa19.39■□□□□ 0.69
ACTN1-220ENST00000556433 HIST3H3Q16695 136 aa19.39■□□□□ 0.69
ACTN1-220ENST00000556433 SLC36A2Q495M3 483 aa19.39■□□□□ 0.69
ACTN1-220ENST00000556433 RGS7BPQ6MZT1 257 aaPredicted RBP19.39■□□□□ 0.69
ACTN1-220ENST00000556433 UGT2A3Q6UWM9 527 aa19.39■□□□□ 0.69
ACTN1-220ENST00000556433 DPPA2Q7Z7J5 298 aa19.39■□□□□ 0.69
ACTN1-220ENST00000556433 PAQR4Q8N4S7 273 aaPredicted RBP19.39■□□□□ 0.69
ACTN1-220ENST00000556433 SYT14Q8NB59 555 aa19.39■□□□□ 0.69
ACTN1-220ENST00000556433 TMEM255BQ8WV15 326 aa19.39■□□□□ 0.69
ACTN1-220ENST00000556433 CDH20Q9HBT6 801 aa19.39■□□□□ 0.69
ACTN1-220ENST00000556433 ZNF346Q9UL40 294 aaKnown RBP19.39■□□□□ 0.69
ACTN1-220ENST00000556433 FXYD1O00168 92 aa19.38■□□□□ 0.69
ACTN1-220ENST00000556433 TRMUO75648 421 aaKnown RBP19.38■□□□□ 0.69
ACTN1-220ENST00000556433 OR5F1O95221 314 aa19.38■□□□□ 0.69
ACTN1-220ENST00000556433 IFNA14P01570 189 aa19.38■□□□□ 0.69
ACTN1-220ENST00000556433 NAT2P11245 290 aa19.38■□□□□ 0.69
ACTN1-220ENST00000556433 ACADSP16219 412 aa19.38■□□□□ 0.69
ACTN1-220ENST00000556433 GPR6P46095 362 aaPredicted RBP19.38■□□□□ 0.69
ACTN1-220ENST00000556433 KLF10Q13118 480 aa19.38■□□□□ 0.69
ACTN1-220ENST00000556433 ALKBH6Q3KRA9 238 aa19.38■□□□□ 0.69
ACTN1-220ENST00000556433 ERICH5Q6P6B1 374 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms