RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 ZNF99A8MXY4 864 aaPredicted RBP8.43□□□□□ -1.06
SRP54-210ENST00000556380 TNFRSF11BO00300 401 aa8.43□□□□□ -1.06
SRP54-210ENST00000556380 TRMUO75648 421 aaKnown RBP8.43□□□□□ -1.06
SRP54-210ENST00000556380 KRT33AO76009 404 aa8.43□□□□□ -1.06
SRP54-210ENST00000556380 RAP2AP10114 183 aa8.43□□□□□ -1.06
SRP54-210ENST00000556380 ACADSP16219 412 aa8.43□□□□□ -1.06
SRP54-210ENST00000556380 CDH2P19022 906 aaPredicted RBP8.43□□□□□ -1.06
SRP54-210ENST00000556380 DAP3P51398 398 aaKnown RBP8.43□□□□□ -1.06
SRP54-210ENST00000556380 NR1H2P55055 460 aa8.43□□□□□ -1.06
SRP54-210ENST00000556380 CTXN1P60606 82 aa8.43□□□□□ -1.06
SRP54-210ENST00000556380 RPL27P61353 136 aaKnown RBP8.43□□□□□ -1.06
SRP54-210ENST00000556380 MELKQ14680 651 aa8.43□□□□□ -1.06
SRP54-210ENST00000556380 TAF11Q15544 211 aa8.43□□□□□ -1.06
SRP54-210ENST00000556380 OR2T5Q6IEZ7 315 aa8.43□□□□□ -1.06
SRP54-210ENST00000556380 C1orf94Q6P1W5 598 aa8.43□□□□□ -1.06
SRP54-210ENST00000556380 PGBD2Q6P3X8 592 aa8.43□□□□□ -1.06
SRP54-210ENST00000556380 RRM2BQ7LG56 351 aa8.43□□□□□ -1.06
SRP54-210ENST00000556380 FAM122BQ7Z309 247 aa8.43□□□□□ -1.06
SRP54-210ENST00000556380 OR2T29Q8NH02 315 aa8.43□□□□□ -1.06
SRP54-210ENST00000556380 OR52N5Q8NH56 324 aa8.43□□□□□ -1.06
SRP54-210ENST00000556380 LILRB1Q8NHL6 650 aaPredicted RBP8.43□□□□□ -1.06
SRP54-210ENST00000556380 ZNF519Q8TB69 540 aa8.43□□□□□ -1.06
SRP54-210ENST00000556380 HDAC2Q92769 488 aaKnown RBP8.43□□□□□ -1.06
SRP54-210ENST00000556380 ZNF566Q969W8 418 aa8.43□□□□□ -1.06
SRP54-210ENST00000556380 LRGUKQ96M69 825 aa8.43□□□□□ -1.06
SRP54-210ENST00000556380 TSPAN32Q96QS1 320 aa8.43□□□□□ -1.06
SRP54-210ENST00000556380 GPX7Q96SL4 187 aaPredicted RBP8.43□□□□□ -1.06
SRP54-210ENST00000556380 MMADHCQ9H3L0 296 aaPredicted RBP8.43□□□□□ -1.06
SRP54-210ENST00000556380 NGBQ9NPG2 151 aa8.43□□□□□ -1.06
SRP54-210ENST00000556380 OBP2BQ9NPH6 170 aa8.43□□□□□ -1.06
SRP54-210ENST00000556380 B3GNT2Q9NY97 397 aa8.43□□□□□ -1.06
SRP54-210ENST00000556380 ZNF346Q9UL40 294 aaKnown RBP8.43□□□□□ -1.06
SRP54-210ENST00000556380 MTORP42345 2549 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 CELSR1Q9NYQ6 3014 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 A0A096LPE4 126 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 A0A1W2PPZ6 126 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 DHRS12A0PJE2 317 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 ZNF503-AS2A6NEH8 195 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 UNC119BA6NIH7 251 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 MCIDASD6RGH6 385 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 STAMBPO95630 424 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 IGHG1P01857 330 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 CD14P08571 375 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 QDPRP09417 244 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 FPR3P25089 353 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 PRPS1P60891 318 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 PSMA6P60900 246 aaKnown RBP8.42□□□□□ -1.06
SRP54-210ENST00000556380 ERVK-25P63136 954 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 CBX1P83916 185 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 BSPH1Q075Z2 132 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 PPP1R8Q12972 351 aaKnown RBP8.42□□□□□ -1.06
SRP54-210ENST00000556380 FLOT2Q14254 428 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 C10orf128Q5T292 105 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 ALKBH2Q6NS38 261 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 ADAM5Q6NVV9 412 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 SLC25A47Q6Q0C1 308 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 IGFN1Q86VF2 1251 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 ARIH2OSQ8N7S6 290 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 FAM169BQ8N8A8 192 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 SYT14Q8NB59 555 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 OR6N1Q8NGY5 312 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 IGFBPL1Q8WX77 278 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 MCHR2Q969V1 340 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 UTP4Q969X6 686 aaKnown RBP8.42□□□□□ -1.06
SRP54-210ENST00000556380 RSRC1Q96IZ7 334 aaKnown RBP8.42□□□□□ -1.06
SRP54-210ENST00000556380 MDFIQ99750 246 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 KATNB1Q9BVA0 655 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 C1QTNF6Q9BXI9 259 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 ULBP2Q9BZM5 246 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 ESRP2Q9H6T0 727 aaKnown RBP8.42□□□□□ -1.06
SRP54-210ENST00000556380 B3GAT2Q9NPZ5 323 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 NRIP3Q9NQ35 241 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 CCM2LQ9NUG4 571 aaPredicted RBP8.42□□□□□ -1.06
SRP54-210ENST00000556380 ZNF224Q9NZL3 707 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 CRNNQ9UBG3 495 aaPredicted RBP8.42□□□□□ -1.06
SRP54-210ENST00000556380 TMCC3Q9ULS5 477 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 AURKCQ9UQB9 309 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 AMDHD2Q9Y303 409 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 UGT2A1Q9Y4X1 527 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 RTTNQ86VV8 2226 aa8.42□□□□□ -1.06
SRP54-210ENST00000556380 TEP1Q99973 2627 aaKnown RBP8.42□□□□□ -1.06
SRP54-210ENST00000556380 IGKV1D-43A0A0B4J1Z2 117 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 SHISA9B4DS77 424 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 DHHO43323 396 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 OR10H3O60404 316 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 FKBP6O75344 327 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 NDUFB2O95178 105 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 TXNDC12O95881 172 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 GASTP01350 101 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 IGLV1-44P01699 117 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 CD3EP07766 207 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 PAX7P23759 505 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 CD40P25942 277 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 ACVR1BP36896 505 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 IFNGR2P38484 337 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 ZNF83P51522 516 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 TSPAN31Q12999 210 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 GK3PQ14409 553 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 MICAQ29983 383 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 RFX4Q33E94 735 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms