RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 hCG_2039718K7EN88 272 aa10.04□□□□□ -0.8
SLIRP-205ENST00000556310 ENTPD5O75356 428 aa10.04□□□□□ -0.8
SLIRP-205ENST00000556310 IGHMP01871 453 aa10.04□□□□□ -0.8
SLIRP-205ENST00000556310 CECR9P0C854 216 aa10.04□□□□□ -0.8
SLIRP-205ENST00000556310 CD99P14209 185 aa10.04□□□□□ -0.8
SLIRP-205ENST00000556310 B4GALT1P15291 398 aa10.04□□□□□ -0.8
SLIRP-205ENST00000556310 CBR1P16152 277 aa10.04□□□□□ -0.8
SLIRP-205ENST00000556310 ITGA2P17301 1181 aa10.04□□□□□ -0.8
SLIRP-205ENST00000556310 MAKP20794 623 aa10.04□□□□□ -0.8
SLIRP-205ENST00000556310 CALB2P22676 271 aa10.04□□□□□ -0.8
SLIRP-205ENST00000556310 MSX2P35548 267 aaPredicted RBP10.04□□□□□ -0.8
SLIRP-205ENST00000556310 ARR3P36575 388 aa10.04□□□□□ -0.8
SLIRP-205ENST00000556310 SLC9A3P48764 834 aa10.04□□□□□ -0.8
SLIRP-205ENST00000556310 TAF11Q15544 211 aa10.04□□□□□ -0.8
SLIRP-205ENST00000556310 ALG10Q5BKT4 473 aa10.04□□□□□ -0.8
SLIRP-205ENST00000556310 ARMC4Q5T2S8 1044 aa10.04□□□□□ -0.8
SLIRP-205ENST00000556310 ZNF544Q6NX49 715 aa10.04□□□□□ -0.8
SLIRP-205ENST00000556310 ARHGAP24Q8N264 748 aa10.04□□□□□ -0.8
SLIRP-205ENST00000556310 SLC7A13Q8TCU3 470 aa10.04□□□□□ -0.8
SLIRP-205ENST00000556310 NANOS1Q8WY41 292 aaKnown RBP10.04□□□□□ -0.8
SLIRP-205ENST00000556310 PYURFQ96I23 114 aa10.04□□□□□ -0.8
SLIRP-205ENST00000556310 DHRS1Q96LJ7 313 aa10.04□□□□□ -0.8
SLIRP-205ENST00000556310 DHRS9Q9BPW9 319 aa10.04□□□□□ -0.8
SLIRP-205ENST00000556310 KCNS3Q9BQ31 491 aa10.04□□□□□ -0.8
SLIRP-205ENST00000556310 MRPL13Q9BYD1 178 aaKnown RBP10.04□□□□□ -0.8
SLIRP-205ENST00000556310 MOKQ9UQ07 419 aa10.04□□□□□ -0.8
SLIRP-205ENST00000556310 TMEM5Q9Y2B1 443 aa10.04□□□□□ -0.8
SLIRP-205ENST00000556310 V9GYQ6 96 aa10.04□□□□□ -0.8
SLIRP-205ENST00000556310 TRAV27A0A087WT01 109 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 ZNF503-AS2A6NEH8 195 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 B2RBV5 119 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 DHHO43323 396 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 CRYAAP02489 173 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 NR2C1P13056 603 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 ACADSP16219 412 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 TTKP33981 857 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 GPR4P46093 362 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 CAPZA2P47755 286 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 IDH3GP51553 393 aaPredicted RBP10.03□□□□□ -0.8
SLIRP-205ENST00000556310 ATP5J2P56134 94 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 CLRN1P58418 232 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 NAAAQ02083 359 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 RUNX1T1Q06455 604 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 HIST3H3Q16695 136 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 IQCCQ4KMZ1 466 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 FGD3Q5JSP0 725 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 AGAP6Q5VW22 663 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 FAM205BPQ63HN1 556 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 C11orf71Q6IPW1 123 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 LRFN4Q6PJG9 635 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 TBPL2Q6SJ96 375 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 TMPRSS11FQ6ZWK6 438 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 RRM2BQ7LG56 351 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 PIWIL3Q7Z3Z3 882 aaKnown RBP10.03□□□□□ -0.8
SLIRP-205ENST00000556310 YTHDF3Q7Z739 585 aaKnown RBP10.03□□□□□ -0.8
SLIRP-205ENST00000556310 OAFQ86UD1 273 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 MDP1Q86V88 176 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 CDK20Q8IZL9 346 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 FBXL14Q8N1E6 418 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 OR13C2Q8NGS9 318 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 GTPBP3Q969Y2 492 aaKnown RBP10.03□□□□□ -0.8
SLIRP-205ENST00000556310 TRMT61AQ96FX7 289 aaKnown RBP10.03□□□□□ -0.8
SLIRP-205ENST00000556310 TXNIPQ9H3M7 391 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 MUC13Q9H3R2 512 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 SEC61A2Q9H9S3 476 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 DLL4Q9NR61 685 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 TMEM38BQ9NVV0 291 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 B3GNT2Q9NY97 397 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 ACTR3BQ9P1U1 418 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 ATP23Q9Y6H3 246 aa10.03□□□□□ -0.8
SLIRP-205ENST00000556310 CDC42EP2O14613 210 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 TRMUO75648 421 aaKnown RBP10.02□□□□□ -0.81
SLIRP-205ENST00000556310 DIRAS1O95057 198 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 UBL3O95164 117 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 CD8AP01732 235 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 HLA-HP01893 362 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 FABP3P05413 133 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 CELA3BP08861 270 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 QDPRP09417 244 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 T-ENOLP0DO92 83 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 CDKN1AP38936 164 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 LIMS1P48059 325 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 FABP6P51161 128 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 ZNF133P52736 654 aaPredicted RBP10.02□□□□□ -0.81
SLIRP-205ENST00000556310 SMIM11AP58511 58 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 NPRL3Q12980 569 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 TOP3AQ13472 1001 aaPredicted RBP10.02□□□□□ -0.81
SLIRP-205ENST00000556310 FHL1Q13642 323 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 ETFDHQ16134 617 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 GSG1Q2KHT4 349 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 NRN1LQ496H8 165 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 MTX3Q5HYI7 312 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 C10orf128Q5T292 105 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 PODNL1Q6PEZ8 512 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 MYPOPQ86VE0 399 aaPredicted RBP10.02□□□□□ -0.81
SLIRP-205ENST00000556310 MEX3DQ86XN8 651 aaKnown RBP10.02□□□□□ -0.81
SLIRP-205ENST00000556310 MUC15Q8N387 334 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 LRRC75AQ8NAA5 344 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 SYT14Q8NB59 555 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 OR51A7Q8NH64 312 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms