RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 SLC2A1P11166 492 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 NR2C1P13056 603 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 ACADSP16219 412 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 DPEP1P16444 411 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 TCP1P17987 556 aaKnown RBP2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 MAGP20916 626 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 UGT1A4P22310 534 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 TUBG1P23258 451 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 PCK1P35558 622 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 TGFBR2P37173 567 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 MAGEA3P43357 314 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 RPS5P46782 204 aaKnown RBP2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 CSNK1EP49674 416 aaKnown RBP2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 MEOX2P50222 304 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 HLCSP50747 726 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 PRKXP51817 358 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 ERVS71-1P61550 626 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 PITPNAQ00169 270 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 CDK16Q00536 496 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 RGS1Q08116 209 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 ELAVL3Q14576 367 aaKnown RBP2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 SIX1Q15475 284 aaPredicted RBP2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 ZIC1Q15915 447 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 CCL14Q16627 93 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 BSXQ3C1V8 233 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 SNAI3Q3KNW1 292 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 GGTA1PQ4G0N0 100 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 PAN3Q58A45 887 aaKnown RBP2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 RNLSQ5VYX0 342 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 FAM219BQ5XKK7 198 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 REP15Q6BDI9 236 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 ZSCAN25Q6NSZ9 544 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 RPL13AP3Q6NVV1 102 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 NIPAL1Q6NVV3 410 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 FAM71F2Q6NXP2 309 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 ULK3Q6PHR2 472 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 CLEC18BQ6UXF7 455 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 CD300LGQ6UXG3 332 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 LRRC74BQ6ZQY2 392 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 CYS1Q717R9 158 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 ARCQ7LC44 396 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 SSX9Q7RTT3 188 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 PEX26Q7Z412 305 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 DPPA2Q7Z7J5 298 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 ZNF589Q86UQ0 364 aaPredicted RBP2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 MYPOPQ86VE0 399 aaPredicted RBP2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 SLC26A11Q86WA9 606 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 CATSPER3Q86XQ3 398 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 SPAG16Q8N0X2 631 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 TMEM123Q8N131 208 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 STK40Q8N2I9 435 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 ZNF491Q8N8L2 437 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 OR5D13Q8NGL4 314 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 OR4D5Q8NGN0 318 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 OR10J5Q8NHC4 309 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 FLVCR1-AS1Q8TAF5 88 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 CNIH3Q8TBE1 160 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 TBCKQ8TEA7 893 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 PYROXD1Q8WU10 500 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 MAFIPQ8WZ33 124 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 TAF15Q92804 592 aaKnown RBP eCLIP2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 NTNG2Q96CW9 530 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 RAB3CQ96E17 227 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 MOCOSQ96EN8 888 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 TMEM80Q96HE8 168 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 SMIM10Q96HG1 83 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 PPP1R36Q96LQ0 422 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 ZNF285Q96NJ3 590 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 C12orf57Q99622 126 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 CITED1Q99966 193 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 C7orf50Q9BRJ6 194 aaKnown RBP2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 C2orf88Q9BSF0 95 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 MED10Q9BTT4 135 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 CHRDL1Q9BU40 450 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 TSSK1BQ9BXA7 367 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 ZNF717Q9BY31 904 aaPredicted RBP2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 DUSP16Q9BY84 665 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 FGFBP2Q9BYJ0 223 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 KRTAP4-7Q9BYR0 210 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 BARHL1Q9BZE3 327 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 TM6SF2Q9BZW4 377 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 CCDC90BQ9GZT6 254 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 OR51M1Q9H341 326 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 ASB7Q9H672 318 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 KIR3DX1Q9H7L2 352 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 RAB18Q9NP72 206 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 TUBG2Q9NRH3 451 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 ABCC13Q9NSE7 274 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 DDX19AQ9NUU7 478 aaKnown RBP2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 VNN3Q9NY84 501 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 TAS2R9Q9NYW1 312 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 MYEF2Q9P2K5 600 aaKnown RBP2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 ABCD2Q9UBJ2 740 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 TBC1D24Q9ULP9 559 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 CLEC4EQ9ULY5 219 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 NPIPA1Q9UND3 350 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 PROCRQ9UNN8 238 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 TP53TG5Q9Y2B4 290 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 ZNF337Q9Y3M9 751 aa2.46□□□□□ -2.02
MTHFD1-212ENST00000555858 RHBDD3Q9Y3P4 386 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms