RNA–Protein interactions for RNA: ENST00000555740.5

PCNX4-210, Transcript of pecanex 4, humanhuman

TSL 2

Gene PCNX4, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-210ENST00000555740 WARS2Q9UGM6 360 aaKnown RBP6.92□□□□□ -1.3
PCNX4-210ENST00000555740 PSORS1C1Q9UIG5 152 aa6.92□□□□□ -1.3
PCNX4-210ENST00000555740 ING1Q9UK53 422 aaPredicted RBP6.92□□□□□ -1.3
PCNX4-210ENST00000555740 ZNF346Q9UL40 294 aaKnown RBP6.92□□□□□ -1.3
PCNX4-210ENST00000555740 FRYQ5TBA9 3013 aa6.92□□□□□ -1.3
PCNX4-210ENST00000555740 MAGEA13PA6NCF6 341 aa6.92□□□□□ -1.3
PCNX4-210ENST00000555740 EFCAB10A6NFE3 127 aa6.92□□□□□ -1.3
PCNX4-210ENST00000555740 SNTNA6NMZ2 147 aa6.92□□□□□ -1.3
PCNX4-210ENST00000555740 NPIPA5E9PKD4 350 aa6.92□□□□□ -1.3
PCNX4-210ENST00000555740 RAMP1O60894 148 aa6.92□□□□□ -1.3
PCNX4-210ENST00000555740 ENTPD6O75354 484 aa6.92□□□□□ -1.3
PCNX4-210ENST00000555740 ZNF432O94892 652 aa6.92□□□□□ -1.3
PCNX4-210ENST00000555740 SLC2A10O95528 541 aa6.92□□□□□ -1.3
PCNX4-210ENST00000555740 NR2C1P13056 603 aa6.92□□□□□ -1.3
PCNX4-210ENST00000555740 CENPAP49450 140 aa6.92□□□□□ -1.3
PCNX4-210ENST00000555740 SLC35A2P78381 396 aa6.92□□□□□ -1.3
PCNX4-210ENST00000555740 POU3F1Q03052 451 aaPredicted RBP6.92□□□□□ -1.3
PCNX4-210ENST00000555740 ZNF91Q05481 1191 aa6.92□□□□□ -1.3
PCNX4-210ENST00000555740 ITGADQ13349 1161 aa6.92□□□□□ -1.3
PCNX4-210ENST00000555740 RNPS1Q15287 305 aaKnown RBP6.92□□□□□ -1.3
PCNX4-210ENST00000555740 GUSBP1Q15486 140 aa6.92□□□□□ -1.3
PCNX4-210ENST00000555740 LCN1P1Q5VSP4 162 aa6.92□□□□□ -1.3
PCNX4-210ENST00000555740 FOXL2NBQ6ZUU3 175 aa6.92□□□□□ -1.3
PCNX4-210ENST00000555740 CREB3L2Q70SY1 520 aa6.92□□□□□ -1.3
PCNX4-210ENST00000555740 FCRLAQ7L513 359 aa6.92□□□□□ -1.3
PCNX4-210ENST00000555740 ZIC4Q8N9L1 334 aa6.92□□□□□ -1.3
PCNX4-210ENST00000555740 TMEM54Q969K7 222 aa6.92□□□□□ -1.3
PCNX4-210ENST00000555740 UBE2FQ969M7 185 aa6.92□□□□□ -1.3
PCNX4-210ENST00000555740 LRR1Q96L50 414 aa6.92□□□□□ -1.3
PCNX4-210ENST00000555740 LDAHQ9H6V9 325 aa6.92□□□□□ -1.3
PCNX4-210ENST00000555740 MARCH7Q9H992 704 aa6.92□□□□□ -1.3
PCNX4-210ENST00000555740 IL20RAQ9UHF4 553 aa6.92□□□□□ -1.3
PCNX4-210ENST00000555740 MCTS1Q9ULC4 181 aaKnown RBP6.92□□□□□ -1.3
PCNX4-210ENST00000555740 NPIPA1Q9UND3 350 aa6.92□□□□□ -1.3
PCNX4-210ENST00000555740 PRSS37A4D1T9 235 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 MEGF11A6BM72 1044 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 VSTM5A8MXK1 200 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 PRR23D1E9PI22 279 aaPredicted RBP6.91□□□□□ -1.3
PCNX4-210ENST00000555740 H0YC42 278 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 J3QRE1 110 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 TLX2O43763 284 aaPredicted RBP6.91□□□□□ -1.3
PCNX4-210ENST00000555740 SYNGR4O95473 234 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 F13BP05160 661 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 PGA4P0DJD7 388 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 PGA3P0DJD8 388 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 PRR23D2P0DMB1 279 aaPredicted RBP6.91□□□□□ -1.3
PCNX4-210ENST00000555740 DBTP11182 482 aaKnown RBP6.91□□□□□ -1.3
PCNX4-210ENST00000555740 HLA-DOBP13765 273 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 ACVR2AP27037 513 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 CDKN2AP42771 156 aaKnown RBP6.91□□□□□ -1.3
PCNX4-210ENST00000555740 TUBA4AP68366 448 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 EEF1A1P5Q5VTE0 462 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 ZNF773Q6PK81 442 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 PCSK4Q6UW60 755 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 ZNF786Q8N393 782 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 OR2M2Q96R28 347 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 TUBA1CQ9BQE3 449 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 SLC25A18Q9H1K4 315 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 FGF20Q9NP95 211 aaPredicted RBP6.91□□□□□ -1.3
PCNX4-210ENST00000555740 GLRX2Q9NS18 164 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 DNAJC27Q9NZQ0 273 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 EMC3Q9P0I2 261 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.91□□□□□ -1.3
PCNX4-210ENST00000555740 MOKQ9UQ07 419 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 EXOGQ9Y2C4 368 aaKnown RBP6.91□□□□□ -1.3
PCNX4-210ENST00000555740 TPRKBQ9Y3C4 175 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 RPL36Q9Y3U8 105 aaKnown RBP6.91□□□□□ -1.3
PCNX4-210ENST00000555740 FLVCR1Q9Y5Y0 555 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 FKBP7Q9Y680 259 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 CHD8Q9HCK8 2581 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 IGLV1-36A0A0B4J1U3 117 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 SLC22A23A1A5C7 686 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 OR6C68A6NDL8 312 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 CD8B2A6NJW9 211 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 CLCA1A8K7I4 914 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 C11orf98E9PRG8 122 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 GPR171O14626 319 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 SS18L1O75177 396 aaPredicted RBP6.91□□□□□ -1.3
PCNX4-210ENST00000555740 RENP00797 406 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 OPN1LWP04000 364 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 HOXD4P09016 255 aaPredicted RBP6.91□□□□□ -1.3
PCNX4-210ENST00000555740 SPI1P17947 270 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 FMO3P31513 532 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 PTGS2P35354 604 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 ACVR1BP36896 505 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 RAB40BQ12829 278 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 IRF3Q14653 427 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 SF3B4Q15427 424 aaKnown RBP eCLIP6.91□□□□□ -1.3
PCNX4-210ENST00000555740 ACSF3Q4G176 576 aaPredicted RBP6.91□□□□□ -1.3
PCNX4-210ENST00000555740 C10orf128Q5T292 105 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 B3GNT6Q6ZMB0 384 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 MEPCEQ7L2J0 689 aaKnown RBP6.91□□□□□ -1.3
PCNX4-210ENST00000555740 CPOQ8IVL8 374 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 WDFY1Q8IWB7 410 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 SDR9C7Q8NEX9 313 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 OR52E2Q8NGJ4 325 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 OR4K13Q8NH42 304 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 INTS12Q96CB8 462 aaKnown RBP6.91□□□□□ -1.3
PCNX4-210ENST00000555740 ZNF845Q96IR2 970 aaPredicted RBP6.91□□□□□ -1.3
PCNX4-210ENST00000555740 IL4I1Q96RQ9 567 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms