RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 DVL2O14641 736 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 SLC16A7O60669 478 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 RAMP1O60894 148 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 KHDRBS3O75525 346 aaKnown RBP9.94□□□□□ -0.82
SHMT2-220ENST00000555634 FARS2O95363 451 aaKnown RBP9.94□□□□□ -0.82
SHMT2-220ENST00000555634 TGM6O95932 706 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 MYL12AP19105 171 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 EEF1B2P24534 225 aaKnown RBP9.94□□□□□ -0.82
SHMT2-220ENST00000555634 FMO3P31513 532 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 OPRM1P35372 400 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 LCN6P62502 163 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 ACTC1P68032 377 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 ACTA1P68133 377 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 TGFBR3Q03167 851 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 APOFQ13790 326 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 OCLNQ16625 522 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 SLC25A30Q5SVS4 291 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 RIPPLY2Q5TAB7 128 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 FGD2Q7Z6J4 655 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 GALNT11Q8NCW6 608 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 OR9Q1Q8NGQ5 310 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 CNIH3Q8TBE1 160 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 RND1Q92730 232 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 HDAC2Q92769 488 aaKnown RBP9.94□□□□□ -0.82
SHMT2-220ENST00000555634 MYDGFQ969H8 173 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 ZNF385AQ96PM9 386 aaKnown RBP9.94□□□□□ -0.82
SHMT2-220ENST00000555634 ALKBH3Q96Q83 286 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-220ENST00000555634 NR1H4Q96RI1 486 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-220ENST00000555634 KCNK17Q96T54 332 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 CNN2Q99439 309 aaKnown RBP9.94□□□□□ -0.82
SHMT2-220ENST00000555634 VKORC1Q9BQB6 163 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 LINC00470Q9BZP3 86 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 RACGAP1Q9H0H5 632 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 KCNN2Q9H2S1 579 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 PIGMQ9H3S5 423 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 VCX3AQ9NNX9 186 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 HINT3Q9NQE9 182 aaKnown RBP9.94□□□□□ -0.82
SHMT2-220ENST00000555634 GLTPQ9NZD2 209 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 COQ3Q9NZJ6 369 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 TINAGQ9UJW2 476 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 CLEC4AQ9UMR7 237 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 COL6A6A6NMZ7 2263 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 SLC22A23A1A5C7 686 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 SLC1A7O00341 560 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 TMCC2O75069 709 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 SMNDC1O75940 238 aaKnown RBP eCLIP9.93□□□□□ -0.826e-6■□□□□ 8.8
SHMT2-220ENST00000555634 SLC2A10O95528 541 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 CNOT4O95628 575 aaKnown RBP9.93□□□□□ -0.82
SHMT2-220ENST00000555634 FADS2O95864 444 aaKnown RBP9.93□□□□□ -0.82
SHMT2-220ENST00000555634 CCDC159P0C7I6 412 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 ZNF823P16415 610 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 SPI1P17947 270 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 KLK2P20151 261 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 CTSSP25774 331 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 HTR1FP30939 366 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 CA7P43166 264 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 MTNR1AP48039 350 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 SELENOPP49908 381 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 CHN2P52757 468 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 CXCR4P61073 352 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 ISL1P61371 349 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 STK11Q15831 433 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 KLHL22Q53GT1 634 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 MEPCEQ7L2J0 689 aaKnown RBP9.93□□□□□ -0.82
SHMT2-220ENST00000555634 DOLPP1Q86YN1 238 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 GLB1L2Q8IW92 636 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 TMEM123Q8N131 208 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 STX19Q8N4C7 294 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 C9orf106Q8NAJ2 232 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 NPEPL1Q8NDH3 523 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 BPIFB6Q8NFQ5 453 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 RHOXF1Q8NHV9 184 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 IPCEF1Q8WWN9 437 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-220ENST00000555634 NANOS1Q8WY41 292 aaKnown RBP9.93□□□□□ -0.82
SHMT2-220ENST00000555634 TXNDC15Q96J42 360 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 TTYH2Q9BSA4 534 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 YTHDF1Q9BYJ9 559 aaKnown RBP9.93□□□□□ -0.82
SHMT2-220ENST00000555634 CHCHD3Q9NX63 227 aaKnown RBP9.93□□□□□ -0.82
SHMT2-220ENST00000555634 ZNF226Q9NYT6 803 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 OSGIN2Q9Y236 505 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 FAM215AQ9Y5M1 114 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 SNX5Q9Y5X3 404 aa9.93□□□□□ -0.82
SHMT2-220ENST00000555634 OR6C68A6NDL8 312 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 B8ZZF3 427 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 CCL21O00585 134 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 PHYHO14832 338 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 ENTPD6O75354 484 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 ZNF432O94892 652 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 GLCEO94923 617 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 RAB36O95755 333 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 QDPRP09417 244 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 DBTP11182 482 aaKnown RBP9.92□□□□□ -0.82
SHMT2-220ENST00000555634 NPR2P20594 1047 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 CDKN2AP42771 156 aaKnown RBP9.92□□□□□ -0.82
SHMT2-220ENST00000555634 OR3A2P47893 321 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 GABARAPL2P60520 117 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 TLE1Q04724 770 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 ZNF91Q05481 1191 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 PMPCAQ10713 525 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 RAB40BQ12829 278 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms