RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 GGTLC2Q14390 218 aa11.92□□□□□ -0.5
PCNX4-209ENST00000555569 RAB39AQ14964 217 aa11.92□□□□□ -0.5
PCNX4-209ENST00000555569 CYB5R2Q6BCY4 276 aa11.92□□□□□ -0.5
PCNX4-209ENST00000555569 ARPINQ7Z6K5 226 aa11.92□□□□□ -0.5
PCNX4-209ENST00000555569 CDK20Q8IZL9 346 aa11.92□□□□□ -0.5
PCNX4-209ENST00000555569 SLC22A24Q8N4F4 322 aa11.92□□□□□ -0.5
PCNX4-209ENST00000555569 RP9Q8TA86 221 aaKnown RBP11.92□□□□□ -0.5
PCNX4-209ENST00000555569 NEU4Q8WWR8 484 aaPredicted RBP11.92□□□□□ -0.5
PCNX4-209ENST00000555569 TPD52L3Q96J77 140 aa11.92□□□□□ -0.5
PCNX4-209ENST00000555569 FOXN4Q96NZ1 517 aa11.92□□□□□ -0.5
PCNX4-209ENST00000555569 INIPQ9NRY2 104 aa11.92□□□□□ -0.5
PCNX4-209ENST00000555569 C20orf141Q9NUB4 165 aa11.92□□□□□ -0.5
PCNX4-209ENST00000555569 TMEM38BQ9NVV0 291 aa11.92□□□□□ -0.5
PCNX4-209ENST00000555569 MED31Q9Y3C7 131 aa11.92□□□□□ -0.5
PCNX4-209ENST00000555569 FARS2O95363 451 aaKnown RBP11.91□□□□□ -0.5
PCNX4-209ENST00000555569 GLRXP35754 106 aa11.91□□□□□ -0.5
PCNX4-209ENST00000555569 AQP2P41181 271 aa11.91□□□□□ -0.5
PCNX4-209ENST00000555569 EVX1P49640 407 aa11.91□□□□□ -0.5
PCNX4-209ENST00000555569 GZMKP49863 264 aa11.91□□□□□ -0.5
PCNX4-209ENST00000555569 DAP3P51398 398 aaKnown RBP11.91□□□□□ -0.5
PCNX4-209ENST00000555569 RPS23P62266 143 aaKnown RBP11.91□□□□□ -0.5
PCNX4-209ENST00000555569 SELENOWP63302 87 aa11.91□□□□□ -0.5
PCNX4-209ENST00000555569 GALK2Q01415 458 aa11.91□□□□□ -0.5
PCNX4-209ENST00000555569 RUNX1T1Q06455 604 aa11.91□□□□□ -0.5
PCNX4-209ENST00000555569 ST3GAL3Q11203 375 aa11.91□□□□□ -0.5
PCNX4-209ENST00000555569 HIST3H3Q16695 136 aa11.91□□□□□ -0.5
PCNX4-209ENST00000555569 MSMPQ1L6U9 139 aa11.91□□□□□ -0.5
PCNX4-209ENST00000555569 CHRFAM7AQ494W8 412 aa11.91□□□□□ -0.5
PCNX4-209ENST00000555569 HDDC2Q7Z4H3 204 aa11.91□□□□□ -0.5
PCNX4-209ENST00000555569 ZCCHC24Q8N2G6 241 aaKnown RBP11.91□□□□□ -0.5
PCNX4-209ENST00000555569 NOXO1Q8NFA2 376 aa11.91□□□□□ -0.5
PCNX4-209ENST00000555569 FGFBP3Q8TAT2 258 aa11.91□□□□□ -0.5
PCNX4-209ENST00000555569 LIPHQ8WWY8 451 aa11.91□□□□□ -0.5
PCNX4-209ENST00000555569 ASB10Q8WXI3 467 aa11.91□□□□□ -0.5
PCNX4-209ENST00000555569 MRPL24Q96A35 216 aaKnown RBP11.91□□□□□ -0.5
PCNX4-209ENST00000555569 PRRC1Q96M27 445 aa11.91□□□□□ -0.5
PCNX4-209ENST00000555569 ZNF347Q96SE7 839 aa11.91□□□□□ -0.5
PCNX4-209ENST00000555569 MDFIQ99750 246 aa11.91□□□□□ -0.5
PCNX4-209ENST00000555569 SH3GL3Q99963 347 aa11.91□□□□□ -0.5
PCNX4-209ENST00000555569 MED4Q9NPJ6 270 aa11.91□□□□□ -0.5
PCNX4-209ENST00000555569 CMTM6Q9NX76 183 aa11.91□□□□□ -0.5
PCNX4-209ENST00000555569 GMPR2Q9P2T1 348 aaKnown RBP11.91□□□□□ -0.5
PCNX4-209ENST00000555569 COL6A5A8TX70 2615 aa11.91□□□□□ -0.5
PCNX4-209ENST00000555569 CENPBD1B2RD01 187 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 TRMUO75648 421 aaKnown RBP11.9□□□□□ -0.5
PCNX4-209ENST00000555569 STAMBPO95630 424 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 SERPINA5P05154 406 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 IGFBP1P08833 259 aaPredicted RBP11.9□□□□□ -0.5
PCNX4-209ENST00000555569 ADRA2AP08913 450 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 TSPAN19P0C672 248 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 COX4I1P13073 169 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 APEHP13798 732 aaKnown RBP11.9□□□□□ -0.5
PCNX4-209ENST00000555569 DAOP14920 347 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 ACADSP16219 412 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 ZNF16P17020 682 aaPredicted RBP11.9□□□□□ -0.5
PCNX4-209ENST00000555569 IFNA8P32881 189 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 LSP1P33241 339 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 MDH1P40925 334 aaKnown RBP11.9□□□□□ -0.5
PCNX4-209ENST00000555569 ZNF84P51523 738 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 MYBPC1Q00872 1141 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 FXNQ16595 210 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 IQCCQ4KMZ1 466 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 GKAP1Q5VSY0 366 aaPredicted RBP11.9□□□□□ -0.5
PCNX4-209ENST00000555569 TMEM53Q6P2H8 277 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 DPPA2Q7Z7J5 298 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 ZNF584Q8IVC4 421 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 SLC15A3Q8IY34 581 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 SYT14Q8NB59 555 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 ZNF540Q8NDQ6 660 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 OR4K5Q8NGD3 323 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 MOSPD2Q8NHP6 518 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 LZICQ8WZA0 190 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 MCHR2Q969V1 340 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 KCNK17Q96T54 332 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 SEPHS2Q99611 448 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 MRPL13Q9BYD1 178 aaKnown RBP11.9□□□□□ -0.5
PCNX4-209ENST00000555569 MRPL37Q9BZE1 423 aaKnown RBP11.9□□□□□ -0.5
PCNX4-209ENST00000555569 BPESC1Q9GZL8 116 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 RNF121Q9H920 327 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 TMEM160Q9NX00 188 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 STX18Q9P2W9 335 aaKnown RBP11.9□□□□□ -0.5
PCNX4-209ENST00000555569 SLC7A8Q9UHI5 535 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 A4GNTQ9UNA3 340 aa11.9□□□□□ -0.5
PCNX4-209ENST00000555569 IGHV4-61A0A0C4DH41 118 aa11.89□□□□□ -0.51
PCNX4-209ENST00000555569 M0R233 179 aa11.89□□□□□ -0.51
PCNX4-209ENST00000555569 SYNGR3O43761 229 aa11.89□□□□□ -0.51
PCNX4-209ENST00000555569 PIP5K1CO60331 668 aa11.89□□□□□ -0.51
PCNX4-209ENST00000555569 CCDC22O60826 627 aa11.89□□□□□ -0.51
PCNX4-209ENST00000555569 IFNA2P01563 188 aa11.89□□□□□ -0.51
PCNX4-209ENST00000555569 ZNF133P52736 654 aaPredicted RBP11.89□□□□□ -0.51
PCNX4-209ENST00000555569 LIPEQ05469 1076 aa11.89□□□□□ -0.51
PCNX4-209ENST00000555569 LAPTM4AQ15012 233 aa11.89□□□□□ -0.51
PCNX4-209ENST00000555569 NRN1LQ496H8 165 aa11.89□□□□□ -0.51
PCNX4-209ENST00000555569 ARMC4Q5T2S8 1044 aa11.89□□□□□ -0.51
PCNX4-209ENST00000555569 SLC16A14Q7RTX9 510 aa11.89□□□□□ -0.51
PCNX4-209ENST00000555569 VTCN1Q7Z7D3 282 aa11.89□□□□□ -0.51
PCNX4-209ENST00000555569 UBASH3BQ8TF42 649 aa11.89□□□□□ -0.51
PCNX4-209ENST00000555569 SYT3Q9BQG1 590 aa11.89□□□□□ -0.51
PCNX4-209ENST00000555569 TPK1Q9H3S4 243 aa11.89□□□□□ -0.51
PCNX4-209ENST00000555569 CDC42EP3Q9UKI2 254 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms