RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 MYBPC1Q00872 1141 aa21.13■□□□□ 0.97
PRKCH-216ENST00000555542 LIPEQ05469 1076 aa21.13■□□□□ 0.97
PRKCH-216ENST00000555542 RAB39AQ14964 217 aa21.13■□□□□ 0.97
PRKCH-216ENST00000555542 LRFN4Q6PJG9 635 aa21.13■□□□□ 0.97
PRKCH-216ENST00000555542 SYT14Q8NB59 555 aa21.13■□□□□ 0.97
PRKCH-216ENST00000555542 NOXO1Q8NFA2 376 aa21.13■□□□□ 0.97
PRKCH-216ENST00000555542 ZNF347Q96SE7 839 aa21.13■□□□□ 0.97
PRKCH-216ENST00000555542 SH3GL3Q99963 347 aa21.13■□□□□ 0.97
PRKCH-216ENST00000555542 LOC390937A0A1W2PQ73 354 aa21.12■□□□□ 0.97
PRKCH-216ENST00000555542 KIAA1324LA8MWY0 1029 aaPredicted RBP21.12■□□□□ 0.97
PRKCH-216ENST00000555542 ZNF682O95780 498 aa21.12■□□□□ 0.97
PRKCH-216ENST00000555542 IGF2P01344 180 aa21.12■□□□□ 0.97
PRKCH-216ENST00000555542 LSM11P83369 360 aaKnown RBP eCLIP21.12■□□□□ 0.97
PRKCH-216ENST00000555542 VLDLRP98155 873 aa21.12■□□□□ 0.97
PRKCH-216ENST00000555542 IQCCQ4KMZ1 466 aa21.12■□□□□ 0.97
PRKCH-216ENST00000555542 C6orf52Q5T4I8 152 aa21.12■□□□□ 0.97
PRKCH-216ENST00000555542 ASB10Q8WXI3 467 aa21.12■□□□□ 0.97
PRKCH-216ENST00000555542 MCHR2Q969V1 340 aa21.12■□□□□ 0.97
PRKCH-216ENST00000555542 DOK1Q99704 481 aa21.12■□□□□ 0.97
PRKCH-216ENST00000555542 EFCAB1Q9HAE3 211 aa21.12■□□□□ 0.97
PRKCH-216ENST00000555542 STX18Q9P2W9 335 aaKnown RBP21.12■□□□□ 0.97
PRKCH-216ENST00000555542 PIP5K1CO60331 668 aa21.11■□□□□ 0.97
PRKCH-216ENST00000555542 IFNW1P05000 195 aa21.11■□□□□ 0.97
PRKCH-216ENST00000555542 ZNF35P13682 527 aa21.11■□□□□ 0.97
PRKCH-216ENST00000555542 ACADSP16219 412 aa21.11■□□□□ 0.97
PRKCH-216ENST00000555542 YAP1P46937 504 aaKnown RBP21.11■□□□□ 0.97
PRKCH-216ENST00000555542 NUDT2P50583 147 aa21.11■□□□□ 0.97
PRKCH-216ENST00000555542 SLC7A2P52569 658 aa21.11■□□□□ 0.97
PRKCH-216ENST00000555542 RPS23P62266 143 aaKnown RBP21.11■□□□□ 0.97
PRKCH-216ENST00000555542 SLC36A2Q495M3 483 aa21.11■□□□□ 0.97
PRKCH-216ENST00000555542 CYB5R2Q6BCY4 276 aa21.11■□□□□ 0.97
PRKCH-216ENST00000555542 TMEM53Q6P2H8 277 aa21.11■□□□□ 0.97
PRKCH-216ENST00000555542 SLC16A14Q7RTX9 510 aa21.11■□□□□ 0.97
PRKCH-216ENST00000555542 SLC15A3Q8IY34 581 aa21.11■□□□□ 0.97
PRKCH-216ENST00000555542 CDK20Q8IZL9 346 aa21.11■□□□□ 0.97
PRKCH-216ENST00000555542 ZCCHC24Q8N2G6 241 aaKnown RBP21.11■□□□□ 0.97
PRKCH-216ENST00000555542 OR4K5Q8NGD3 323 aa21.11■□□□□ 0.97
PRKCH-216ENST00000555542 MOSPD2Q8NHP6 518 aa21.11■□□□□ 0.97
PRKCH-216ENST00000555542 NEU4Q8WWR8 484 aaPredicted RBP21.11■□□□□ 0.97
PRKCH-216ENST00000555542 ZNF75AQ96N20 296 aa21.11■□□□□ 0.97
PRKCH-216ENST00000555542 FOXN4Q96NZ1 517 aa21.11■□□□□ 0.97
PRKCH-216ENST00000555542 HOPXQ9BPY8 73 aaPredicted RBP21.11■□□□□ 0.97
PRKCH-216ENST00000555542 FNDC11Q9BVV2 318 aa21.11■□□□□ 0.97
PRKCH-216ENST00000555542 GMPR2Q9P2T1 348 aaKnown RBP21.11■□□□□ 0.97
PRKCH-216ENST00000555542 ADAM21Q9UKJ8 722 aa21.11■□□□□ 0.97
PRKCH-216ENST00000555542 A4GNTQ9UNA3 340 aa21.11■□□□□ 0.97
PRKCH-216ENST00000555542 CXCR6O00574 342 aa21.1■□□□□ 0.97
PRKCH-216ENST00000555542 TRMUO75648 421 aaKnown RBP21.1■□□□□ 0.97
PRKCH-216ENST00000555542 ADRA2AP08913 450 aa21.1■□□□□ 0.97
PRKCH-216ENST00000555542 IFI30P13284 250 aa21.1■□□□□ 0.97
PRKCH-216ENST00000555542 NR4A2P43354 598 aa21.1■□□□□ 0.97
PRKCH-216ENST00000555542 RUNX1T1Q06455 604 aa21.1■□□□□ 0.97
PRKCH-216ENST00000555542 TOP3AQ13472 1001 aaPredicted RBP21.1■□□□□ 0.97
PRKCH-216ENST00000555542 FKBP9P1Q75LS8 142 aa21.1■□□□□ 0.97
PRKCH-216ENST00000555542 VTCN1Q7Z7D3 282 aa21.1■□□□□ 0.97
PRKCH-216ENST00000555542 FGFBP3Q8TAT2 258 aa21.1■□□□□ 0.97
PRKCH-216ENST00000555542 MRPL24Q96A35 216 aaKnown RBP21.1■□□□□ 0.97
PRKCH-216ENST00000555542 RHCGQ9UBD6 479 aa21.1■□□□□ 0.97
PRKCH-216ENST00000555542 SLC7A8Q9UHI5 535 aa21.1■□□□□ 0.97
PRKCH-216ENST00000555542 ABCA2Q9BZC7 2435 aa21.1■□□□□ 0.97
PRKCH-216ENST00000555542 TMEM129A0AVI4 362 aa21.09■□□□□ 0.97
PRKCH-216ENST00000555542 CENPBD1B2RD01 187 aa21.09■□□□□ 0.97
PRKCH-216ENST00000555542 SERPINA5P05154 406 aa21.09■□□□□ 0.97
PRKCH-216ENST00000555542 SAGP10523 405 aaPredicted RBP21.09■□□□□ 0.97
PRKCH-216ENST00000555542 DAOP14920 347 aa21.09■□□□□ 0.97
PRKCH-216ENST00000555542 ZNF16P17020 682 aaPredicted RBP21.09■□□□□ 0.97
PRKCH-216ENST00000555542 GLRXP35754 106 aa21.09■□□□□ 0.97
PRKCH-216ENST00000555542 CD47Q08722 323 aa21.09■□□□□ 0.97
PRKCH-216ENST00000555542 LAPTM4AQ15012 233 aa21.09■□□□□ 0.97
PRKCH-216ENST00000555542 CHRFAM7AQ494W8 412 aa21.09■□□□□ 0.97
PRKCH-216ENST00000555542 ALG10Q5BKT4 473 aa21.09■□□□□ 0.97
PRKCH-216ENST00000555542 DPPA2Q7Z7J5 298 aa21.09■□□□□ 0.97
PRKCH-216ENST00000555542 ZNF540Q8NDQ6 660 aa21.09■□□□□ 0.97
PRKCH-216ENST00000555542 LIPHQ8WWY8 451 aa21.09■□□□□ 0.97
PRKCH-216ENST00000555542 GEMIN6Q8WXD5 167 aaKnown RBP21.09■□□□□ 0.97
PRKCH-216ENST00000555542 BPIFA2Q96DR5 249 aa21.09■□□□□ 0.97
PRKCH-216ENST00000555542 KCNK17Q96T54 332 aa21.09■□□□□ 0.97
PRKCH-216ENST00000555542 SYT3Q9BQG1 590 aa21.09■□□□□ 0.97
PRKCH-216ENST00000555542 MRPL37Q9BZE1 423 aaKnown RBP21.09■□□□□ 0.97
PRKCH-216ENST00000555542 KCNN2Q9H2S1 579 aa21.09■□□□□ 0.97
PRKCH-216ENST00000555542 TPK1Q9H3S4 243 aa21.09■□□□□ 0.97
PRKCH-216ENST00000555542 VWC2LB2RUY7 222 aa21.08■□□□□ 0.97
PRKCH-216ENST00000555542 M0R233 179 aa21.08■□□□□ 0.97
PRKCH-216ENST00000555542 NME4O00746 187 aa21.08■□□□□ 0.97
PRKCH-216ENST00000555542 NDUFAB1O14561 156 aa21.08■□□□□ 0.97
PRKCH-216ENST00000555542 APEHP13798 732 aaKnown RBP21.08■□□□□ 0.97
PRKCH-216ENST00000555542 TRAM2Q15035 370 aa21.08■□□□□ 0.97
PRKCH-216ENST00000555542 IFI44LQ53G44 452 aa21.08■□□□□ 0.97
PRKCH-216ENST00000555542 HIPK1Q86Z02 1210 aa21.08■□□□□ 0.97
PRKCH-216ENST00000555542 LRRC18Q8N456 261 aa21.08■□□□□ 0.97
PRKCH-216ENST00000555542 SLC30A7Q8NEW0 376 aa21.08■□□□□ 0.97
PRKCH-216ENST00000555542 FAM162AQ96A26 154 aa21.08■□□□□ 0.97
PRKCH-216ENST00000555542 ELAC2Q9BQ52 826 aaKnown RBP21.08■□□□□ 0.97
PRKCH-216ENST00000555542 MRPL13Q9BYD1 178 aaKnown RBP21.08■□□□□ 0.97
PRKCH-216ENST00000555542 BPESC1Q9GZL8 116 aa21.08■□□□□ 0.97
PRKCH-216ENST00000555542 FAM107BQ9H098 131 aa21.08■□□□□ 0.97
PRKCH-216ENST00000555542 CDH20Q9HBT6 801 aa21.08■□□□□ 0.97
PRKCH-216ENST00000555542 FZR1Q9UM11 496 aa21.08■□□□□ 0.97
PRKCH-216ENST00000555542 YLPM1P49750 1951 aaKnown RBP21.07■□□□□ 0.96
PRKCH-216ENST00000555542 J3KTA2 159 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms