RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 CDK5Q00535 292 aa12.58□□□□□ -0.4
CHD8-208ENST00000555301 FAM27E3Q08E93 113 aa12.58□□□□□ -0.4
CHD8-208ENST00000555301 NPRL3Q12980 569 aa12.58□□□□□ -0.4
CHD8-208ENST00000555301 PTGES3Q15185 160 aaKnown RBP12.58□□□□□ -0.4
CHD8-208ENST00000555301 PHYHD1Q5SRE7 291 aa12.58□□□□□ -0.4
CHD8-208ENST00000555301 SLC35F1Q5T1Q4 408 aa12.58□□□□□ -0.4
CHD8-208ENST00000555301 OGFRL1Q5TC84 451 aaPredicted RBP12.58□□□□□ -0.4
CHD8-208ENST00000555301 LPCAT4Q643R3 524 aa12.58□□□□□ -0.4
CHD8-208ENST00000555301 OR7E24Q6IFN5 339 aa12.58□□□□□ -0.4
CHD8-208ENST00000555301 STAC2Q6ZMT1 411 aa12.58□□□□□ -0.4
CHD8-208ENST00000555301 STEAP2Q8NFT2 490 aa12.58□□□□□ -0.4
CHD8-208ENST00000555301 OR4K13Q8NH42 304 aa12.58□□□□□ -0.4
CHD8-208ENST00000555301 MCHR2Q969V1 340 aa12.58□□□□□ -0.4
CHD8-208ENST00000555301 PRRG3Q9BZD7 231 aa12.58□□□□□ -0.4
CHD8-208ENST00000555301 OR10A4Q9H209 315 aa12.58□□□□□ -0.4
CHD8-208ENST00000555301 RIBC2Q9H4K1 309 aa12.58□□□□□ -0.4
CHD8-208ENST00000555301 VSX1Q9NZR4 365 aaPredicted RBP12.58□□□□□ -0.4
CHD8-208ENST00000555301 NKX1-2Q9UD57 310 aaPredicted RBP12.58□□□□□ -0.4
CHD8-208ENST00000555301 KLHL21Q9UJP4 597 aa12.58□□□□□ -0.4
CHD8-208ENST00000555301 DOCK7Q96N67 2140 aa12.58□□□□□ -0.4
CHD8-208ENST00000555301 MPDZO75970 2070 aa12.57□□□□□ -0.4
CHD8-208ENST00000555301 CIB4A0PJX0 185 aa12.57□□□□□ -0.4
CHD8-208ENST00000555301 RIIAD1A6NNX1 92 aa12.57□□□□□ -0.4
CHD8-208ENST00000555301 ZNF99A8MXY4 864 aaPredicted RBP12.57□□□□□ -0.4
CHD8-208ENST00000555301 DHHO43323 396 aa12.57□□□□□ -0.4
CHD8-208ENST00000555301 LYZL6O75951 148 aa12.57□□□□□ -0.4
CHD8-208ENST00000555301 ATP6V1G2O95670 118 aa12.57□□□□□ -0.4
CHD8-208ENST00000555301 ITGA5P08648 1049 aa12.57□□□□□ -0.4
CHD8-208ENST00000555301 IL32P24001 234 aa12.57□□□□□ -0.4
CHD8-208ENST00000555301 PEX2P28328 305 aa12.57□□□□□ -0.4
CHD8-208ENST00000555301 UGT2B10P36537 528 aa12.57□□□□□ -0.4
CHD8-208ENST00000555301 CDKN2AP42771 156 aaKnown RBP12.57□□□□□ -0.4
CHD8-208ENST00000555301 ZNF84P51523 738 aa12.57□□□□□ -0.4
CHD8-208ENST00000555301 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.57□□□□□ -0.4
CHD8-208ENST00000555301 LRRC36Q1X8D7 754 aa12.57□□□□□ -0.4
CHD8-208ENST00000555301 CEACAM16Q2WEN9 425 aa12.57□□□□□ -0.4
CHD8-208ENST00000555301 C10orf128Q5T292 105 aa12.57□□□□□ -0.4
CHD8-208ENST00000555301 LEG1Q6P5S2 330 aa12.57□□□□□ -0.4
CHD8-208ENST00000555301 LRFN4Q6PJG9 635 aa12.57□□□□□ -0.4
CHD8-208ENST00000555301 DNM1P34Q6PK57 102 aa12.57□□□□□ -0.4
CHD8-208ENST00000555301 PTCHD4Q6ZW05 846 aa12.57□□□□□ -0.4
CHD8-208ENST00000555301 LINGO2Q7L985 606 aa12.57□□□□□ -0.4
CHD8-208ENST00000555301 BHLHA15Q7RTS1 189 aaPredicted RBP12.57□□□□□ -0.4
CHD8-208ENST00000555301 IQCF1Q8N6M8 205 aa12.57□□□□□ -0.4
CHD8-208ENST00000555301 ZNF433Q8N7K0 673 aaPredicted RBP12.57□□□□□ -0.4
CHD8-208ENST00000555301 C1orf162Q8NEQ5 155 aaPredicted RBP12.57□□□□□ -0.4
CHD8-208ENST00000555301 OR52E2Q8NGJ4 325 aa12.57□□□□□ -0.4
CHD8-208ENST00000555301 NMD3Q96D46 503 aaKnown RBP12.57□□□□□ -0.4
CHD8-208ENST00000555301 RDH12Q96NR8 316 aa12.57□□□□□ -0.4
CHD8-208ENST00000555301 SLC38A2Q96QD8 506 aa12.57□□□□□ -0.4
CHD8-208ENST00000555301 NMNAT3Q96T66 252 aa12.57□□□□□ -0.4
CHD8-208ENST00000555301 VCXQ9H320 206 aa12.57□□□□□ -0.4
CHD8-208ENST00000555301 CMC2Q9NRP2 79 aa12.57□□□□□ -0.4
CHD8-208ENST00000555301 NCOA6Q14686 2063 aaPredicted RBP12.57□□□□□ -0.4
CHD8-208ENST00000555301 HIVEP3Q5T1R4 2406 aa12.56□□□□□ -0.4
CHD8-208ENST00000555301 ZAR1LA6NP61 321 aa12.56□□□□□ -0.4
CHD8-208ENST00000555301 PRSS44E7EML9 344 aa12.56□□□□□ -0.4
CHD8-208ENST00000555301 H7C1C5 153 aa12.56□□□□□ -0.4
CHD8-208ENST00000555301 PPP3CBP16298 524 aa12.56□□□□□ -0.4
CHD8-208ENST00000555301 ZNF3P17036 446 aa12.56□□□□□ -0.4
CHD8-208ENST00000555301 CRABP1P29762 137 aa12.56□□□□□ -0.4
CHD8-208ENST00000555301 LCN6P62502 163 aa12.56□□□□□ -0.4
CHD8-208ENST00000555301 C9orf135Q5VTT2 229 aa12.56□□□□□ -0.4
CHD8-208ENST00000555301 SLX4IPQ5VYV7 408 aa12.56□□□□□ -0.4
CHD8-208ENST00000555301 ACSM5Q6NUN0 579 aa12.56□□□□□ -0.4
CHD8-208ENST00000555301 SSX8Q7RTT4 187 aa12.56□□□□□ -0.4
CHD8-208ENST00000555301 C17orf78Q8N4C9 275 aa12.56□□□□□ -0.4
CHD8-208ENST00000555301 NPEPL1Q8NDH3 523 aa12.56□□□□□ -0.4
CHD8-208ENST00000555301 SDR9C7Q8NEX9 313 aa12.56□□□□□ -0.4
CHD8-208ENST00000555301 BOD1Q96IK1 185 aa12.56□□□□□ -0.4
CHD8-208ENST00000555301 PLEKHA8Q96JA3 519 aa12.56□□□□□ -0.4
CHD8-208ENST00000555301 MUS81Q96NY9 551 aa12.56□□□□□ -0.4
CHD8-208ENST00000555301 SYT4Q9H2B2 425 aa12.56□□□□□ -0.4
CHD8-208ENST00000555301 NPDC1Q9NQX5 325 aaPredicted RBP12.56□□□□□ -0.4
CHD8-208ENST00000555301 SMPD3Q9NY59 655 aaPredicted RBP12.56□□□□□ -0.4
CHD8-208ENST00000555301 NDRG3Q9UGV2 375 aa12.56□□□□□ -0.4
CHD8-208ENST00000555301 MYO7BQ6PIF6 2116 aa12.56□□□□□ -0.4
CHD8-208ENST00000555301 MYO18BQ8IUG5 2567 aa12.56□□□□□ -0.4
CHD8-208ENST00000555301 MED12LQ86YW9 2145 aa12.55□□□□□ -0.4
CHD8-208ENST00000555301 SURF4O15260 269 aa12.55□□□□□ -0.4
CHD8-208ENST00000555301 SLC16A7O60669 478 aa12.55□□□□□ -0.4
CHD8-208ENST00000555301 RAD51DO75771 328 aa12.55□□□□□ -0.4
CHD8-208ENST00000555301 SLC2A10O95528 541 aa12.55□□□□□ -0.4
CHD8-208ENST00000555301 HOXB1P14653 301 aaPredicted RBP12.55□□□□□ -0.4
CHD8-208ENST00000555301 GRNP28799 593 aaKnown RBP12.55□□□□□ -0.4
CHD8-208ENST00000555301 HOXC12P31275 282 aa12.55□□□□□ -0.4
CHD8-208ENST00000555301 GUCA1AP43080 201 aaPredicted RBP12.55□□□□□ -0.4
CHD8-208ENST00000555301 FOXG1P55316 489 aaPredicted RBP12.55□□□□□ -0.4
CHD8-208ENST00000555301 ARF1P84077 181 aaKnown RBP12.55□□□□□ -0.4
CHD8-208ENST00000555301 FMODQ06828 376 aa12.55□□□□□ -0.4
CHD8-208ENST00000555301 GABRA6Q16445 453 aa12.55□□□□□ -0.4
CHD8-208ENST00000555301 NRN1LQ496H8 165 aa12.55□□□□□ -0.4
CHD8-208ENST00000555301 ZNF362Q5T0B9 420 aaPredicted RBP12.55□□□□□ -0.4
CHD8-208ENST00000555301 C1QTNF12Q5T7M4 302 aa12.55□□□□□ -0.4
CHD8-208ENST00000555301 TMEM236Q5W0B7 351 aa12.55□□□□□ -0.4
CHD8-208ENST00000555301 ANKRD16Q6P6B7 361 aa12.55□□□□□ -0.4
CHD8-208ENST00000555301 SLC25A47Q6Q0C1 308 aa12.55□□□□□ -0.4
CHD8-208ENST00000555301 ZNF627Q7L945 461 aa12.55□□□□□ -0.4
CHD8-208ENST00000555301 P2RY8Q86VZ1 359 aa12.55□□□□□ -0.4
CHD8-208ENST00000555301 GALNT4Q8N4A0 578 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms