RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 DPY19L2P2Q6ZN68 376 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 ZNF227Q86WZ6 799 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 KRTAP1-3Q8IUG1 177 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 MS4A15Q8N5U1 240 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 ARIH2OSQ8N7S6 290 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 OR4F15Q8NGB8 312 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 SPATA3Q8NHX4 192 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 PHYHIPQ92561 330 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 DIRAS2Q96HU8 199 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 C18orf12Q96KH6 178 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 UTP23Q9BRU9 249 aaKnown RBP10□□□□□ -0.81
SHMT2-216ENST00000554975 KATNB1Q9BVA0 655 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 UBQLN4Q9NRR5 601 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 ZNF337Q9Y3M9 751 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 MXRA5Q9NR99 2828 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 FREM3P0C091 2139 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 HIVEP2P31629 2446 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 A0A087WUJ7 227 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 ARPC4-TTLL3A0A0A6YYG9 625 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 TCRBV16S1A1N1A0A5B0 115 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 CCDC182A6NF36 153 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 FRG2CA6NGY1 282 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 ELOA3DA6NLF2 546 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-216ENST00000554975 OR6C76A6NM76 312 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 HSPB2A8KAH6 182 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 GTPBP1O00178 669 aaKnown RBP9.99□□□□□ -0.81
SHMT2-216ENST00000554975 CTDSP2O14595 271 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 GPRIN2O60269 458 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 TMCC2O75069 709 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 APOL3O95236 402 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 IL33O95760 270 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 IL7P13232 177 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 CD46P15529 392 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 SLC2A5P22732 501 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 GTF2E2P29084 291 aaKnown RBP9.99□□□□□ -0.81
SHMT2-216ENST00000554975 SSTR4P31391 388 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 PTGS2P35354 604 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 TALDO1P37837 337 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 RFC3P40938 356 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 ACAA2P42765 397 aaKnown RBP9.99□□□□□ -0.81
SHMT2-216ENST00000554975 PPICP45877 212 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 EIF2B2P49770 351 aaKnown RBP9.99□□□□□ -0.81
SHMT2-216ENST00000554975 FABP5Q01469 135 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 OC90Q02509 493 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-216ENST00000554975 MXD1Q05195 221 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 ELAVL1Q15717 326 aaKnown RBP9.99□□□□□ -0.81
SHMT2-216ENST00000554975 HSPB2Q16082 182 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 ELOA3BQ3SY89 546 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 KLHL12Q53G59 568 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 HACD4Q5VWC8 232 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 HBMQ6B0K9 141 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 MZT2BQ6NZ67 158 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 BAIAP2L2Q6UXY1 529 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 NPSR1Q6W5P4 371 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 LINC00114Q6XXX2 140 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 SHFQ7M4L6 423 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 LHFPL3Q86UP9 236 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 MEX3DQ86XN8 651 aaKnown RBP9.99□□□□□ -0.81
SHMT2-216ENST00000554975 KLBQ86Z14 1044 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 LAX1Q8IWV1 398 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 CADM3Q8N126 398 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 CADM2Q8N3J6 435 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 TMEM178AQ8NBL3 297 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 SLC37A3Q8NCC5 494 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 SIMC1Q8NDZ2 872 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 FAM83FQ8NEG4 500 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-216ENST00000554975 ELOA3Q8NG57 546 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 OR10H4Q8NGA5 316 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 OR14A16Q8NHC5 309 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 C16orf52Q8NHV5 167 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 RND1Q92730 232 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 HTRA1Q92743 480 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 THRSPQ92748 146 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 KISS1RQ969F8 398 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-216ENST00000554975 TRMT61AQ96FX7 289 aaKnown RBP9.99□□□□□ -0.81
SHMT2-216ENST00000554975 MNTQ99583 582 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 TTYH2Q9BSA4 534 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 DEFB126Q9BYW3 111 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 BARHL1Q9BZE3 327 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 CLEC4MQ9H2X3 399 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-216ENST00000554975 CDCP1Q9H5V8 836 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 MOV10Q9HCE1 1003 aaKnown RBP9.99□□□□□ -0.81
SHMT2-216ENST00000554975 MMP25Q9NPA2 562 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 MEPEQ9NQ76 525 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-216ENST00000554975 C20orf141Q9NUB4 165 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 BABAM2Q9NXR7 383 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 FLRT3Q9NZU0 649 aa9.99□□□□□ -0.81
SHMT2-216ENST00000554975 SONP18583 2426 aaKnown RBP9.99□□□□□ -0.81
SHMT2-216ENST00000554975 IGKV3D-11A0A0A0MRZ8 115 aa9.98□□□□□ -0.81
SHMT2-216ENST00000554975 TRBV11-1A0A0K0K1C0 115 aa9.98□□□□□ -0.81
SHMT2-216ENST00000554975 A0A1W2PQD3 144 aa9.98□□□□□ -0.81
SHMT2-216ENST00000554975 A0A1W2PQL4 384 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-216ENST00000554975 FABP12A6NFH5 140 aa9.98□□□□□ -0.81
SHMT2-216ENST00000554975 IMPA2O14732 288 aa9.98□□□□□ -0.81
SHMT2-216ENST00000554975 PLPP2O43688 288 aa9.98□□□□□ -0.81
SHMT2-216ENST00000554975 NME2P1O60361 137 aa9.98□□□□□ -0.81
SHMT2-216ENST00000554975 PTP4A3O75365 173 aa9.98□□□□□ -0.81
SHMT2-216ENST00000554975 TRIM3O75382 744 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-216ENST00000554975 ARL6IP5O75915 188 aa9.98□□□□□ -0.81
SHMT2-216ENST00000554975 OR7A10O76100 309 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms