RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 CARD17Q5XLA6 110 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 ACSM5Q6NUN0 579 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 ZNF474Q6S9Z5 364 aaPredicted RBP14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 WDFY1Q8IWB7 410 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 IQCF1Q8N6M8 205 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 NRG4Q8WWG1 115 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 HRASLS5Q96KN8 279 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 ULBP2Q9BZM5 246 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 TOR3AQ9H497 397 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 PRSS50Q9UI38 385 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 SLC22A23A1A5C7 686 aa14.5□□□□□ -0.09
SPTLC2-203ENST00000554901 SURF4O15260 269 aa14.5□□□□□ -0.09
SPTLC2-203ENST00000554901 UPK3AO75631 287 aa14.5□□□□□ -0.09
SPTLC2-203ENST00000554901 SNAP29O95721 258 aa14.5□□□□□ -0.09
SPTLC2-203ENST00000554901 EPHA2P29317 976 aa14.5□□□□□ -0.09
SPTLC2-203ENST00000554901 CRABP1P29762 137 aa14.5□□□□□ -0.09
SPTLC2-203ENST00000554901 CDKN2AP42771 156 aaKnown RBP14.5□□□□□ -0.09
SPTLC2-203ENST00000554901 TGFBR3Q03167 851 aa14.5□□□□□ -0.09
SPTLC2-203ENST00000554901 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.5□□□□□ -0.09
SPTLC2-203ENST00000554901 ZNF362Q5T0B9 420 aaPredicted RBP14.5□□□□□ -0.09
SPTLC2-203ENST00000554901 SLC35F1Q5T1Q4 408 aa14.5□□□□□ -0.09
SPTLC2-203ENST00000554901 C10orf128Q5T292 105 aa14.5□□□□□ -0.09
SPTLC2-203ENST00000554901 C12orf73Q69YU5 71 aa14.5□□□□□ -0.09
SPTLC2-203ENST00000554901 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.5□□□□□ -0.09
SPTLC2-203ENST00000554901 LUZP2Q86TE4 346 aa14.5□□□□□ -0.09
SPTLC2-203ENST00000554901 SYT14Q8NB59 555 aa14.5□□□□□ -0.09
SPTLC2-203ENST00000554901 OR52E2Q8NGJ4 325 aa14.5□□□□□ -0.09
SPTLC2-203ENST00000554901 OR4K13Q8NH42 304 aa14.5□□□□□ -0.09
SPTLC2-203ENST00000554901 SSC4DQ8WTU2 575 aa14.5□□□□□ -0.09
SPTLC2-203ENST00000554901 USP9XQ93008 2570 aaPredicted RBP14.5□□□□□ -0.09
SPTLC2-203ENST00000554901 ALKBH3Q96Q83 286 aaPredicted RBP14.5□□□□□ -0.09
SPTLC2-203ENST00000554901 DDOQ99489 341 aa14.5□□□□□ -0.09
SPTLC2-203ENST00000554901 USB1Q9BQ65 265 aaKnown RBP14.5□□□□□ -0.09
SPTLC2-203ENST00000554901 RBM24Q9BX46 236 aaKnown RBP14.5□□□□□ -0.09
SPTLC2-203ENST00000554901 HDHD5Q9BXW7 423 aa14.5□□□□□ -0.09
SPTLC2-203ENST00000554901 TAS2R16Q9NYV7 291 aa14.5□□□□□ -0.09
SPTLC2-203ENST00000554901 HELZ2Q9BYK8 2649 aaKnown RBP14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 M0R3G1 203 aa14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 DLGAP1O14490 977 aa14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 SLC16A6O15403 523 aa14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 IGHV3-9P01782 118 aa14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 QDPRP09417 244 aa14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 PSMB1P20618 241 aaKnown RBP14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 POLR2IP36954 125 aaKnown RBP14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 CD79BP40259 229 aa14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 ROR2Q01974 943 aaKnown RBP14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 FAPQ12884 760 aa14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 C1QTNF12Q5T7M4 302 aa14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 TMEM236Q5W0B7 351 aa14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 LEG1Q6P5S2 330 aa14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 LRFN4Q6PJG9 635 aa14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 DNM1P34Q6PK57 102 aa14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 PTCHD4Q6ZW05 846 aa14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 NPEPL1Q8NDH3 523 aa14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 C1orf162Q8NEQ5 155 aaPredicted RBP14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 RNASE6Q93091 150 aaKnown RBP14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 MCHR2Q969V1 340 aa14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 BOD1Q96IK1 185 aa14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 PLEKHA8Q96JA3 519 aa14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 MBOAT4Q96T53 435 aa14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 NMNAT3Q96T66 252 aa14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 PITX2Q99697 317 aa14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 OR10A4Q9H209 315 aa14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 FN3KQ9H479 309 aa14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 CRLF2Q9HC73 371 aa14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 GPR35Q9HC97 309 aa14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 NDRG4Q9ULP0 352 aaKnown RBP14.49□□□□□ -0.09
SPTLC2-203ENST00000554901 FREM1Q5H8C1 2179 aa14.48□□□□□ -0.09
SPTLC2-203ENST00000554901 FAM90A27PA6NNH2 459 aa14.48□□□□□ -0.09
SPTLC2-203ENST00000554901 DHHO43323 396 aa14.48□□□□□ -0.09
SPTLC2-203ENST00000554901 PAICSP22234 425 aaKnown RBP14.48□□□□□ -0.09
SPTLC2-203ENST00000554901 CDC42P60953 191 aa14.48□□□□□ -0.09
SPTLC2-203ENST00000554901 SRSF1Q07955 248 aaKnown RBP eCLIP14.48□□□□□ -0.09
SPTLC2-203ENST00000554901 KEAP1Q14145 624 aa14.48□□□□□ -0.09
SPTLC2-203ENST00000554901 SNAPC1Q16533 368 aa14.48□□□□□ -0.09
SPTLC2-203ENST00000554901 ZIK1Q3SY52 487 aaPredicted RBP14.48□□□□□ -0.09
SPTLC2-203ENST00000554901 NRN1LQ496H8 165 aa14.48□□□□□ -0.09
SPTLC2-203ENST00000554901 PHYHD1Q5SRE7 291 aa14.48□□□□□ -0.09
SPTLC2-203ENST00000554901 TTC23Q5W5X9 447 aa14.48□□□□□ -0.09
SPTLC2-203ENST00000554901 ZNF627Q7L945 461 aa14.48□□□□□ -0.09
SPTLC2-203ENST00000554901 ZNF555Q8NEP9 628 aa14.48□□□□□ -0.09
SPTLC2-203ENST00000554901 SDR9C7Q8NEX9 313 aa14.48□□□□□ -0.09
SPTLC2-203ENST00000554901 TRUB1Q8WWH5 349 aaKnown RBP14.48□□□□□ -0.09
SPTLC2-203ENST00000554901 SYT4Q9H2B2 425 aa14.48□□□□□ -0.09
SPTLC2-203ENST00000554901 FAM118AQ9NWS6 357 aa14.48□□□□□ -0.09
SPTLC2-203ENST00000554901 GPR52Q9Y2T5 361 aa14.48□□□□□ -0.09
SPTLC2-203ENST00000554901 FKBP7Q9Y680 259 aa14.48□□□□□ -0.09
SPTLC2-203ENST00000554901 LOC100130705A0A1B0GUX0 176 aa14.47□□□□□ -0.09
SPTLC2-203ENST00000554901 ZNF99A8MXY4 864 aaPredicted RBP14.47□□□□□ -0.09
SPTLC2-203ENST00000554901 H0YAE9 185 aa14.47□□□□□ -0.09
SPTLC2-203ENST00000554901 IGHV1-2P23083 117 aa14.47□□□□□ -0.09
SPTLC2-203ENST00000554901 GGT2P36268 569 aa14.47□□□□□ -0.09
SPTLC2-203ENST00000554901 VHLP40337 213 aa14.47□□□□□ -0.09
SPTLC2-203ENST00000554901 PEX19P40855 299 aa14.47□□□□□ -0.09
SPTLC2-203ENST00000554901 ZNF84P51523 738 aa14.47□□□□□ -0.09
SPTLC2-203ENST00000554901 SLC25A1P53007 311 aa14.47□□□□□ -0.09
SPTLC2-203ENST00000554901 EFNB1P98172 346 aa14.47□□□□□ -0.09
SPTLC2-203ENST00000554901 SORDQ00796 357 aa14.47□□□□□ -0.09
SPTLC2-203ENST00000554901 LGALS3BPQ08380 585 aa14.47□□□□□ -0.09
SPTLC2-203ENST00000554901 CRMP1Q14194 572 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms