RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 ZNF250P15622 560 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 GALP22466 123 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 DRD3P35462 400 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 RPS10P46783 165 aaKnown RBP2.09□□□□□ -2.07
SCFD1-213ENST00000554776 TFPI2P48307 235 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 CCR6P51684 374 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 NCBP2P52298 156 aaKnown RBP eCLIP2.09□□□□□ -2.072e-12■■□□□ 12.9
SCFD1-213ENST00000554776 C21orf59P57076 290 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 NUTF2P61970 127 aaKnown RBP2.09□□□□□ -2.07
SCFD1-213ENST00000554776 RPS21P63220 83 aaKnown RBP2.09□□□□□ -2.07
SCFD1-213ENST00000554776 ZNF92Q03936 586 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 SELENBP1Q13228 472 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 ILKQ13418 452 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 CHRNA6Q15825 494 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 ZBED5Q49AG3 693 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 CLEC2AQ6UVW9 174 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 EIF3MQ7L2H7 374 aaKnown RBP2.09□□□□□ -2.07
SCFD1-213ENST00000554776 LUZP2Q86TE4 346 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 CMTM1Q8IZ96 169 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 LIX1Q8N485 282 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 FAM71E2Q8N5Q1 922 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 ZFP41Q8N8Y5 198 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 Q8N9W7 124 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 FBXL13Q8NEE6 735 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 VN1R2Q8NFZ6 395 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 OR7G2Q8NG99 324 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 OR52K2Q8NGK3 314 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 AGR3Q8TD06 166 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 DTX3LQ8TDB6 740 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 GPR151Q8TDV0 419 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 LRRC58Q96CX6 371 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 PKNOX2Q96KN3 472 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 PRRC1Q96M27 445 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 OR5B12Q96R08 314 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 CHP1Q99653 195 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 ILKAPQ9H0C8 392 aaPredicted RBP2.09□□□□□ -2.07
SCFD1-213ENST00000554776 DNTTIP1Q9H147 329 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 RPF2Q9H7B2 306 aaKnown RBP2.09□□□□□ -2.07
SCFD1-213ENST00000554776 GEMIN7Q9H840 131 aaKnown RBP2.09□□□□□ -2.07
SCFD1-213ENST00000554776 KCNJ16Q9NPI9 418 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 GLRX2Q9NS18 164 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 ZNF225Q9UK10 706 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 TP53TG5Q9Y2B4 290 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 F11RQ9Y624 299 aaKnown RBP2.09□□□□□ -2.07
SCFD1-213ENST00000554776 CACNG2Q9Y698 323 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 WDR19Q8NEZ3 1342 aa2.09□□□□□ -2.08
SCFD1-213ENST00000554776 GTF3C1Q12789 2109 aa2.09□□□□□ -2.08
SCFD1-213ENST00000554776 CEMIPQ8WUJ3 1361 aa2.09□□□□□ -2.08
SCFD1-213ENST00000554776 PDS5BQ9NTI5 1447 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 LTBP1Q14766 1721 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 ZNF816-ZNF321PA0A0X1KG74 233 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 KMOO15229 486 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 SUPT3HO75486 399 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 EIF3GO75821 320 aaKnown RBP eCLIP2.08□□□□□ -2.08
SCFD1-213ENST00000554776 CLPXO76031 633 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 SERPINA5P05154 406 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 ANXA8P13928 327 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 HPGDP15428 266 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 GTF2E2P29084 291 aaKnown RBP2.08□□□□□ -2.08
SCFD1-213ENST00000554776 SLC26A3P40879 764 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 NAA10P41227 235 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-213ENST00000554776 CCR8P51685 355 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 RGS8P57771 180 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-213ENST00000554776 MERTKQ12866 999 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 ARHGAP19Q14CB8 494 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 SGCAQ16586 387 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 KCTD19Q17RG1 926 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-213ENST00000554776 RSPO1Q2MKA7 263 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-213ENST00000554776 RFX4Q33E94 735 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 C2orf83Q53S99 150 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 SPANXN2Q5MJ10 180 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 ANXA8L1Q5VT79 327 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 TMEM220Q6QAJ8 160 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 CCDC73Q6ZRK6 1079 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 NCCRP1Q6ZVX7 275 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-213ENST00000554776 COX15Q7KZN9 410 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 SLC16A14Q7RTX9 510 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 MMAAQ8IVH4 418 aaKnown RBP2.08□□□□□ -2.08
SCFD1-213ENST00000554776 NPBQ8NG41 125 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 OR4A4PQ8NGN8 299 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 OR1N2Q8NGR9 330 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 OR2G3Q8NGZ4 309 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 RHEBL1Q8TAI7 183 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 RNF138Q8WVD3 245 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 STARD8Q92502 1023 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 NRGNQ92686 78 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 SLC38A4Q969I6 547 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 IL22RA2Q969J5 263 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 DUS3LQ96G46 650 aaKnown RBP2.08□□□□□ -2.08
SCFD1-213ENST00000554776 RNF185Q96GF1 192 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 ZNF578Q96N58 590 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-213ENST00000554776 OR2M2Q96R28 347 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 C11orf70Q9BRQ4 267 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 RACGAP1Q9H0H5 632 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 RANBP3Q9H6Z4 567 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-213ENST00000554776 RETNQ9HD89 108 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 DDX18Q9NVP1 670 aaKnown RBP2.08□□□□□ -2.08
SCFD1-213ENST00000554776 PCYOX1Q9UHG3 505 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 ING4Q9UNL4 249 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 MRPS18BQ9Y676 258 aaKnown RBP2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms