RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, human

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDR39U1-208	ENST00000554698	ARF1	P84077	181 aa	Known RBP	18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	TAB1	Q15750	504 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	ZNF787	Q6DD87	383 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	ANKRD16	Q6P6B7	361 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	ZNF627	Q7L945	461 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	ZDHHC13	Q8IUH4	622 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	ATG16L2	Q8NAA4	619 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	OR52L1	Q8NGH7	329 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	DNAJC9	Q8WXX5	260 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	BCL2L2	Q92843	193 aa	Predicted RBP	18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	MCHR2	Q969V1	340 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	RASD2	Q96D21	266 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	ERMAP	Q96PL5	475 aa	Predicted RBP	18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	GABARAPL1	Q9H0R8	117 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	ZNF556	Q9HAH1	456 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	SMURF2	Q9HAU4	748 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	BHLHE40	O14503	412 aa		18.8	■□□□□ 0.6
SDR39U1-208	ENST00000554698	ARHGEF9	O43307	516 aa		18.8	■□□□□ 0.6
SDR39U1-208	ENST00000554698	IDH3B	O43837	385 aa		18.8	■□□□□ 0.6
SDR39U1-208	ENST00000554698	AHCYL1	O43865	530 aa		18.8	■□□□□ 0.6
SDR39U1-208	ENST00000554698	SOX14	O95416	240 aa		18.8	■□□□□ 0.6
SDR39U1-208	ENST00000554698	IGFBP1	P08833	259 aa	Predicted RBP	18.8	■□□□□ 0.6
SDR39U1-208	ENST00000554698	NR2C1	P13056	603 aa		18.8	■□□□□ 0.6
SDR39U1-208	ENST00000554698	ZNF23	P17027	643 aa		18.8	■□□□□ 0.6
SDR39U1-208	ENST00000554698	KRR1	Q13601	381 aa	Known RBP	18.8	■□□□□ 0.6
SDR39U1-208	ENST00000554698	DAZAP2	Q15038	168 aa	Predicted RBP	18.8	■□□□□ 0.6
SDR39U1-208	ENST00000554698	CLEC12A	Q5QGZ9	265 aa		18.8	■□□□□ 0.6
SDR39U1-208	ENST00000554698	C1QTNF12	Q5T7M4	302 aa		18.8	■□□□□ 0.6
SDR39U1-208	ENST00000554698	SSX8	Q7RTT4	187 aa		18.8	■□□□□ 0.6
SDR39U1-208	ENST00000554698	ADCK1	Q86TW2	530 aa		18.8	■□□□□ 0.6
SDR39U1-208	ENST00000554698	ZNF295-AS1	Q8N0V1	137 aa		18.8	■□□□□ 0.6
SDR39U1-208	ENST00000554698	FNDC8	Q8TC99	324 aa		18.8	■□□□□ 0.6
SDR39U1-208	ENST00000554698	MARVELD3	Q96A59	401 aa		18.8	■□□□□ 0.6
SDR39U1-208	ENST00000554698	NELFA	Q9H3P2	528 aa		18.8	■□□□□ 0.6
SDR39U1-208	ENST00000554698	SLC17A5	Q9NRA2	495 aa		18.8	■□□□□ 0.6
SDR39U1-208	ENST00000554698	ZNF226	Q9NYT6	803 aa		18.8	■□□□□ 0.6
SDR39U1-208	ENST00000554698	OAZ3	Q9UMX2	235 aa		18.8	■□□□□ 0.6
SDR39U1-208	ENST00000554698	PKDREJ	Q9NTG1	2253 aa		18.79	■□□□□ 0.6
SDR39U1-208	ENST00000554698	XKRY	O14609	159 aa		18.79	■□□□□ 0.6
SDR39U1-208	ENST00000554698	DHH	O43323	396 aa		18.79	■□□□□ 0.6
SDR39U1-208	ENST00000554698	CRYGS	P22914	178 aa		18.79	■□□□□ 0.6
SDR39U1-208	ENST00000554698	DAP	P51397	102 aa		18.79	■□□□□ 0.6
SDR39U1-208	ENST00000554698	MYBPC1	Q00872	1141 aa		18.79	■□□□□ 0.6
SDR39U1-208	ENST00000554698	CD47	Q08722	323 aa		18.79	■□□□□ 0.6
SDR39U1-208	ENST00000554698	SLC36A3	Q495N2	470 aa		18.79	■□□□□ 0.6
SDR39U1-208	ENST00000554698	HIKESHI	Q53FT3	197 aa		18.79	■□□□□ 0.6
SDR39U1-208	ENST00000554698	THEM4	Q5T1C6	240 aa		18.79	■□□□□ 0.6
SDR39U1-208	ENST00000554698	C10orf128	Q5T292	105 aa		18.79	■□□□□ 0.6
SDR39U1-208	ENST00000554698	SEZ6L2	Q6UXD5	910 aa		18.79	■□□□□ 0.6
SDR39U1-208	ENST00000554698	WDR31	Q8NA23	367 aa		18.79	■□□□□ 0.6
SDR39U1-208	ENST00000554698	STMN2	Q93045	179 aa		18.79	■□□□□ 0.6
SDR39U1-208	ENST00000554698	ZC3HAV1L	Q96H79	300 aa	Known RBP	18.79	■□□□□ 0.6
SDR39U1-208	ENST00000554698	TBC1D23	Q9NUY8	699 aa		18.79	■□□□□ 0.6
SDR39U1-208	ENST00000554698	CELSR2	Q9HCU4	2923 aa		18.78	■□□□□ 0.6
SDR39U1-208	ENST00000554698	CRYBG3	Q68DQ2	2970 aa		18.78	■□□□□ 0.6
SDR39U1-208	ENST00000554698	SLC22A23	A1A5C7	686 aa		18.78	■□□□□ 0.6
SDR39U1-208	ENST00000554698	PRSS37	A4D1T9	235 aa		18.78	■□□□□ 0.6
SDR39U1-208	ENST00000554698	SOCS2	O14508	198 aa		18.78	■□□□□ 0.6
SDR39U1-208	ENST00000554698	CASK	O14936	926 aa		18.78	■□□□□ 0.6
SDR39U1-208	ENST00000554698	FMOD	Q06828	376 aa		18.78	■□□□□ 0.6
SDR39U1-208	ENST00000554698	TBRG1	Q3YBR2	411 aa		18.78	■□□□□ 0.6
SDR39U1-208	ENST00000554698	LNX2	Q8N448	690 aa		18.78	■□□□□ 0.6
SDR39U1-208	ENST00000554698	MUCL1	Q96DR8	90 aa		18.78	■□□□□ 0.6
SDR39U1-208	ENST00000554698	C14orf79	Q96F83	325 aa		18.78	■□□□□ 0.6
SDR39U1-208	ENST00000554698	RBP7	Q96R05	134 aa		18.78	■□□□□ 0.6
SDR39U1-208	ENST00000554698	FOXB1	Q99853	325 aa		18.78	■□□□□ 0.6
SDR39U1-208	ENST00000554698	TSSK6	Q9BXA6	273 aa		18.78	■□□□□ 0.6
SDR39U1-208	ENST00000554698	VSX1	Q9NZR4	365 aa	Predicted RBP	18.78	■□□□□ 0.6
SDR39U1-208	ENST00000554698	KIF17	Q9P2E2	1029 aa		18.78	■□□□□ 0.6
SDR39U1-208	ENST00000554698	POFUT2	Q9Y2G5	429 aa		18.78	■□□□□ 0.6
SDR39U1-208	ENST00000554698	SLC25A15	Q9Y619	301 aa		18.78	■□□□□ 0.6
SDR39U1-208	ENST00000554698		H7C1C5	153 aa		18.77	■□□□□ 0.6
SDR39U1-208	ENST00000554698	SLC2A10	O95528	541 aa		18.77	■□□□□ 0.6
SDR39U1-208	ENST00000554698	OSM	P13725	252 aa		18.77	■□□□□ 0.6
SDR39U1-208	ENST00000554698	HOXB1	P14653	301 aa	Predicted RBP	18.77	■□□□□ 0.6
SDR39U1-208	ENST00000554698	CDKN2A	P42771	156 aa	Known RBP	18.77	■□□□□ 0.6
SDR39U1-208	ENST00000554698	LCN6	P62502	163 aa		18.77	■□□□□ 0.6
SDR39U1-208	ENST00000554698	PPA1	Q15181	289 aa		18.77	■□□□□ 0.6
SDR39U1-208	ENST00000554698	SLC25A47	Q6Q0C1	308 aa		18.77	■□□□□ 0.6
SDR39U1-208	ENST00000554698	PTCHD4	Q6ZW05	846 aa		18.77	■□□□□ 0.6
SDR39U1-208	ENST00000554698	PARP8	Q8N3A8	854 aa		18.77	■□□□□ 0.6
SDR39U1-208	ENST00000554698	OR2T33	Q8NG76	320 aa		18.77	■□□□□ 0.6
SDR39U1-208	ENST00000554698	OBP2B	Q9NPH6	170 aa		18.77	■□□□□ 0.6
SDR39U1-208	ENST00000554698	PAPOLB	Q9NRJ5	636 aa	Known RBP	18.77	■□□□□ 0.6
SDR39U1-208	ENST00000554698	BAIAP2	Q9UQB8	552 aa		18.77	■□□□□ 0.6
SDR39U1-208	ENST00000554698	AMDHD2	Q9Y303	409 aa		18.77	■□□□□ 0.6
SDR39U1-208	ENST00000554698	UGT2A1	Q9Y4X1	527 aa		18.77	■□□□□ 0.6
SDR39U1-208	ENST00000554698		A0A096LPE4	126 aa		18.76	■□□□□ 0.59
SDR39U1-208	ENST00000554698	ARPC4-TTLL3	A0A0A6YYG9	625 aa		18.76	■□□□□ 0.59
SDR39U1-208	ENST00000554698	IGKV1D-43	A0A0B4J1Z2	117 aa		18.76	■□□□□ 0.59
SDR39U1-208	ENST00000554698		A0A1W2PPZ6	126 aa		18.76	■□□□□ 0.59
SDR39U1-208	ENST00000554698	FAM221A	A4D161	298 aa		18.76	■□□□□ 0.59
SDR39U1-208	ENST00000554698		A6NNC1	897 aa		18.76	■□□□□ 0.59
SDR39U1-208	ENST00000554698	SEC14L2	O76054	403 aa		18.76	■□□□□ 0.59
SDR39U1-208	ENST00000554698	GOSR1	O95249	250 aa		18.76	■□□□□ 0.59
SDR39U1-208	ENST00000554698	HIST1H1C	P16403	213 aa	Known RBP	18.76	■□□□□ 0.59
SDR39U1-208	ENST00000554698	NOS3	P29474	1203 aa		18.76	■□□□□ 0.59
SDR39U1-208	ENST00000554698	HOXC12	P31275	282 aa		18.76	■□□□□ 0.59
SDR39U1-208	ENST00000554698	KDM4D	Q6B0I6	523 aa		18.76	■□□□□ 0.59
SDR39U1-208	ENST00000554698	ZNF813	Q6ZN06	617 aa		18.76	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms