RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 RAB40BQ12829 278 aa12.75□□□□□ -0.37
SHOX2-206ENST00000554685 CARD17Q5XLA6 110 aa12.75□□□□□ -0.37
SHOX2-206ENST00000554685 PCSK4Q6UW60 755 aa12.75□□□□□ -0.37
SHOX2-206ENST00000554685 BCDIN3DQ7Z5W3 292 aaKnown RBP12.75□□□□□ -0.37
SHOX2-206ENST00000554685 ZBTB46Q86UZ6 589 aa12.75□□□□□ -0.37
SHOX2-206ENST00000554685 TUSC5Q8IXB3 177 aa12.75□□□□□ -0.37
SHOX2-206ENST00000554685 TMEM123Q8N131 208 aa12.75□□□□□ -0.37
SHOX2-206ENST00000554685 GPR137CQ8N3F9 429 aa12.75□□□□□ -0.37
SHOX2-206ENST00000554685 SYT14Q8NB59 555 aa12.75□□□□□ -0.37
SHOX2-206ENST00000554685 ST6GALNAC3Q8NDV1 305 aa12.75□□□□□ -0.37
SHOX2-206ENST00000554685 BBS1Q8NFJ9 593 aa12.75□□□□□ -0.37
SHOX2-206ENST00000554685 MBD3L2Q8NHZ7 208 aaPredicted RBP12.75□□□□□ -0.37
SHOX2-206ENST00000554685 MED12Q93074 2177 aa12.75□□□□□ -0.37
SHOX2-206ENST00000554685 TMEM54Q969K7 222 aa12.75□□□□□ -0.37
SHOX2-206ENST00000554685 TEAD3Q99594 435 aa12.75□□□□□ -0.37
SHOX2-206ENST00000554685 HCAR1Q9BXC0 346 aa12.75□□□□□ -0.37
SHOX2-206ENST00000554685 LINC00470Q9BZP3 86 aa12.75□□□□□ -0.37
SHOX2-206ENST00000554685 NUAK2Q9H093 628 aa12.75□□□□□ -0.37
SHOX2-206ENST00000554685 MRPS18AQ9NVS2 196 aaKnown RBP12.75□□□□□ -0.37
SHOX2-206ENST00000554685 GLTPQ9NZD2 209 aa12.75□□□□□ -0.37
SHOX2-206ENST00000554685 ING1Q9UK53 422 aaPredicted RBP12.75□□□□□ -0.37
SHOX2-206ENST00000554685 ZNF835Q9Y2P0 537 aa12.75□□□□□ -0.37
SHOX2-206ENST00000554685 XPNPEP2O43895 674 aa12.74□□□□□ -0.37
SHOX2-206ENST00000554685 SLC19A2O60779 497 aa12.74□□□□□ -0.37
SHOX2-206ENST00000554685 FADS2O95864 444 aaKnown RBP12.74□□□□□ -0.37
SHOX2-206ENST00000554685 RPSAP08865 295 aaKnown RBP12.74□□□□□ -0.37
SHOX2-206ENST00000554685 AGTR1P30556 359 aa12.74□□□□□ -0.37
SHOX2-206ENST00000554685 GUCA1AP43080 201 aaPredicted RBP12.74□□□□□ -0.37
SHOX2-206ENST00000554685 SLC15A1P46059 708 aa12.74□□□□□ -0.37
SHOX2-206ENST00000554685 SELENOPP49908 381 aa12.74□□□□□ -0.37
SHOX2-206ENST00000554685 GLO1Q04760 184 aa12.74□□□□□ -0.37
SHOX2-206ENST00000554685 NFATC3Q12968 1075 aa12.74□□□□□ -0.37
SHOX2-206ENST00000554685 GGTLC2Q14390 218 aa12.74□□□□□ -0.37
SHOX2-206ENST00000554685 HIST3H3Q16695 136 aa12.74□□□□□ -0.37
SHOX2-206ENST00000554685 RIPPLY2Q5TAB7 128 aa12.74□□□□□ -0.37
SHOX2-206ENST00000554685 RPTNQ6XPR3 784 aa12.74□□□□□ -0.37
SHOX2-206ENST00000554685 B3GNT6Q6ZMB0 384 aa12.74□□□□□ -0.37
SHOX2-206ENST00000554685 ABHD12BQ7Z5M8 362 aaPredicted RBP12.74□□□□□ -0.37
SHOX2-206ENST00000554685 C20orf196Q8IYI0 205 aa12.74□□□□□ -0.37
SHOX2-206ENST00000554685 STX19Q8N4C7 294 aa12.74□□□□□ -0.37
SHOX2-206ENST00000554685 POMGNT2Q8NAT1 580 aa12.74□□□□□ -0.37
SHOX2-206ENST00000554685 OR6K6Q8NGW6 343 aa12.74□□□□□ -0.37
SHOX2-206ENST00000554685 APH1AQ96BI3 265 aa12.74□□□□□ -0.37
SHOX2-206ENST00000554685 RNFT2Q96EX2 444 aa12.74□□□□□ -0.37
SHOX2-206ENST00000554685 COPS4Q9BT78 406 aa12.74□□□□□ -0.37
SHOX2-206ENST00000554685 ULBP2Q9BZM5 246 aa12.74□□□□□ -0.37
SHOX2-206ENST00000554685 SLCO5A1Q9H2Y9 848 aa12.74□□□□□ -0.37
SHOX2-206ENST00000554685 DUSP21Q9H596 190 aa12.74□□□□□ -0.37
SHOX2-206ENST00000554685 SRA1Q9HD15 236 aaKnown RBP12.74□□□□□ -0.37
SHOX2-206ENST00000554685 B9D1Q9UPM9 204 aa12.74□□□□□ -0.37
SHOX2-206ENST00000554685 ZNF407Q9C0G0 2248 aa12.74□□□□□ -0.37
SHOX2-206ENST00000554685 ACACBO00763 2458 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 KIAA1549Q9HCM3 1950 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 A0A087WXM4 84 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 IGLV1-36A0A0B4J1U3 117 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 CCDC182A6NF36 153 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 TRIM64A6NGJ6 449 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 PTGES3LE9PB15 166 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 KRT33AO76009 404 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 IL2RAP01589 272 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 GYPBP06028 91 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 QDPRP09417 244 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 GSTT1P30711 240 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 TIMP3P35625 211 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 ZNF84P51523 738 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 ZNF133P52736 654 aaPredicted RBP12.73□□□□□ -0.37
SHOX2-206ENST00000554685 PER3P56645 1201 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 SLC35A2P78381 396 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 STK11Q15831 433 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 AHSA2Q719I0 299 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 FAM214BQ7L5A3 538 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 ZNF100Q8IYN0 542 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 OR6V1Q8N148 313 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 TSPAN14Q8NG11 270 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 GGHQ92820 318 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 MCHR2Q969V1 340 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 ZNF775Q96BV0 537 aaPredicted RBP12.73□□□□□ -0.37
SHOX2-206ENST00000554685 MYCBPQ99417 103 aaPredicted RBP12.73□□□□□ -0.37
SHOX2-206ENST00000554685 CNN2Q99439 309 aaKnown RBP12.73□□□□□ -0.37
SHOX2-206ENST00000554685 RERGLQ9H628 205 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 AMBNQ9NP70 447 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 FKBP14Q9NWM8 211 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 FOXD3Q9UJU5 478 aaPredicted RBP12.73□□□□□ -0.37
SHOX2-206ENST00000554685 CLEC4AQ9UMR7 237 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 SNX5Q9Y5X3 404 aa12.73□□□□□ -0.37
SHOX2-206ENST00000554685 DNAJC13O75165 2243 aa12.72□□□□□ -0.37
SHOX2-206ENST00000554685 ZNHIT1O43257 154 aa12.72□□□□□ -0.37
SHOX2-206ENST00000554685 RGS10O43665 173 aa12.72□□□□□ -0.37
SHOX2-206ENST00000554685 RAB36O95755 333 aa12.72□□□□□ -0.37
SHOX2-206ENST00000554685 HLA-DQA2P01906 255 aa12.72□□□□□ -0.37
SHOX2-206ENST00000554685 CLUP10909 449 aa12.72□□□□□ -0.37
SHOX2-206ENST00000554685 CTLA4P16410 223 aa12.72□□□□□ -0.37
SHOX2-206ENST00000554685 DCKP27707 260 aa12.72□□□□□ -0.37
SHOX2-206ENST00000554685 PYCR1P32322 319 aa12.72□□□□□ -0.37
SHOX2-206ENST00000554685 ACTC1P68032 377 aa12.72□□□□□ -0.37
SHOX2-206ENST00000554685 ACTA1P68133 377 aa12.72□□□□□ -0.37
SHOX2-206ENST00000554685 C10orf128Q5T292 105 aa12.72□□□□□ -0.37
SHOX2-206ENST00000554685 ZNF773Q6PK81 442 aa12.72□□□□□ -0.37
SHOX2-206ENST00000554685 SLC25A47Q6Q0C1 308 aa12.72□□□□□ -0.37
SHOX2-206ENST00000554685 GLB1L2Q8IW92 636 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms