RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 DEFB108BQ8NET1 73 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 FBXO25Q8TCJ0 367 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 ST7LQ8TDW4 575 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 STON2Q8WXE9 905 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 TAF15Q92804 592 aaKnown RBP eCLIP4.08□□□□□ -1.76
ATXN3-229ENST00000554672 L3HYPDHQ96EM0 354 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 RAX2Q96IS3 184 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 FCRL1Q96LA6 429 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 ZNF48Q96MX3 618 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-229ENST00000554672 TSSK3Q96PN8 268 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 OR7D2Q96RA2 312 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 MRI1Q9BV20 369 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 TAPBPLQ9BX59 468 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 MS4A7Q9GZW8 240 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-229ENST00000554672 DENND2DQ9H6A0 471 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-229ENST00000554672 PCNX3Q9H6A9 2034 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 HINT3Q9NQE9 182 aaKnown RBP4.08□□□□□ -1.76
ATXN3-229ENST00000554672 EXOSC3Q9NQT5 275 aaKnown RBP4.08□□□□□ -1.76
ATXN3-229ENST00000554672 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-229ENST00000554672 B3GNT2Q9NY97 397 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 NKIRAS2Q9NYR9 191 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 TMEM216Q9P0N5 145 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 BAIAP2L1Q9UHR4 511 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 ATP6V1HQ9UI12 483 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 OSGIN1Q9UJX0 560 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 MKLN1Q9UL63 735 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 RASD1Q9Y272 281 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 UTP11Q9Y3A2 253 aaKnown RBP4.08□□□□□ -1.76
ATXN3-229ENST00000554672 WIPI2Q9Y4P8 454 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 AUP1Q9Y679 476 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 SAR1BQ9Y6B6 198 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 DSPPQ9NZW4 1301 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 IGHV1-69-2A0A0G2JMI3 117 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 A0A1W2PPW3 197 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 SLC22A23A1A5C7 686 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 CLPSL1A2RUU4 121 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 AGAP5A6NIR3 686 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 C17orf100A8MU93 164 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 TRIM49D1C9J1S8 452 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 CLDN25C9JDP6 229 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 FAAHO00519 579 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 MGST3O14880 152 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 PIN1P1O15428 100 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 RAD51CO43502 376 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 TRAF3IP2O43734 574 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-229ENST00000554672 SCN2BO60939 215 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 NDUFA7O95182 113 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 AGR2O95994 175 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 NGFP01138 241 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 UROSP10746 265 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 LAMP1P11279 417 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 UQCRBP14927 111 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 SELEP16581 610 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 SDC1P18827 310 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 SLC6A2P23975 617 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 CXCR1P25024 350 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 TACR3P29371 465 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 HPCAL1P37235 193 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 MAGEB1P43366 347 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 RAP2BP61225 183 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 KCNJ10P78508 379 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 CCL8P80075 99 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 LCN2P80188 198 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 SLC3A1Q07837 685 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 ZNF154Q13106 437 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 OR7A5Q15622 319 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 GSG1Q2KHT4 349 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 HFEQ30201 348 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 FAM153CQ494X1 144 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 ATP6AP1LQ52LC2 224 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 RFTN2Q52LD8 501 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-229ENST00000554672 KLF17Q5JT82 389 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-229ENST00000554672 VAX1Q5SQQ9 334 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 FAM205BPQ63HN1 556 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 ZDHHC24Q6UX98 284 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 TIFABQ6ZNK6 161 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 C9orf139Q6ZV77 190 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 C6orf120Q7Z4R8 191 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 GPR137CQ8N3F9 429 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 CCNYL1Q8N7R7 359 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 BOLLQ8N9W6 283 aaKnown RBP4.07□□□□□ -1.76
ATXN3-229ENST00000554672 OR5D16Q8NGK9 328 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 CLHC1Q8NHS4 586 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 SFXN5Q8TD22 340 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 MGARPQ8TDB4 240 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 GTF3AQ92664 365 aaKnown RBP4.07□□□□□ -1.76
ATXN3-229ENST00000554672 CCDC126Q96EE4 140 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 ALKBH3Q96Q83 286 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-229ENST00000554672 PRPF18Q99633 342 aaKnown RBP4.07□□□□□ -1.76
ATXN3-229ENST00000554672 NAPGQ99747 312 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-229ENST00000554672 GAL3ST1Q99999 423 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 SLC30A2Q9BRI3 323 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 FUT8Q9BYC5 575 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 ZNF350Q9GZX5 532 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 GSTO2Q9H4Y5 243 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 IFT22Q9H7X7 185 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 GPR35Q9HC97 309 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 MMP26Q9NRE1 261 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 POLE3Q9NRF9 147 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 DECR2Q9NUI1 292 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms