RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 MCTS1Q9ULC4 181 aaKnown RBP4.48□□□□□ -1.69
VTI1B-202ENST00000553619 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.48□□□□□ -1.69
VTI1B-202ENST00000553619 MOKQ9UQ07 419 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 B3GNT3Q9Y2A9 372 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 IER3IP1Q9Y5U9 82 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 USP34Q70CQ2 3546 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 A0A0J9YW62 118 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 A0A1B0GVC2 190 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 PINLYPA6NC86 204 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 EFCAB10A6NFE3 127 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 OR6C65A6NJZ3 312 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 AQP7P3A6NL99 342 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 C17orf51A8MQB3 221 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 AHRRA9YTQ3 701 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 CENPBD1B2RD01 187 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 FTCDNL1E5RQL4 147 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 NPIPA2E9PIF3 369 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 NPIPA5E9PKD4 350 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 C11orf98E9PRG8 122 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 NPIPA3F8WFD2 350 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 MS4A18H0YCH9 400 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 BHLHE40O14503 412 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 SURF4O15260 269 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 FAM20BO75063 409 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 FZD7O75084 574 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 AKR7A3O95154 331 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 PPP1R3DO95685 299 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 CLIC3O95833 236 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 TXNDC12O95881 172 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 IGHG3P01860 377 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 CPN1P15169 458 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 PTNP21246 168 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 TCEA1P23193 301 aaKnown RBP4.47□□□□□ -1.69
VTI1B-202ENST00000553619 CRABP1P29762 137 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 SDHAP31040 664 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 UQCRC1P31930 480 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 ATP6V1E1P36543 226 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 ACVR1BP36896 505 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 CLDN15P56746 228 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 B3GALT5-AS1P59052 145 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 GABARAPL2P60520 117 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 RPS4XP62701 263 aaKnown RBP4.47□□□□□ -1.69
VTI1B-202ENST00000553619 EFNB1P98172 346 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 RPL18Q07020 188 aaKnown RBP4.47□□□□□ -1.69
VTI1B-202ENST00000553619 CD47Q08722 323 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 ITGADQ13349 1161 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 MAD2L1BPQ15013 274 aaPredicted RBP4.47□□□□□ -1.69
VTI1B-202ENST00000553619 PON3Q15166 354 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 RNPS1Q15287 305 aaKnown RBP4.47□□□□□ -1.69
VTI1B-202ENST00000553619 MS4A18Q3C1V0 323 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 SLC35D3Q5M8T2 416 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 CLEC12AQ5QGZ9 265 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 LCN1P1Q5VSP4 162 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 C1QL3Q5VWW1 255 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 NXNL2Q5VZ03 156 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 DNM1P34Q6PK57 102 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 FAM180AQ6UWF9 173 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 SLC35D2Q76EJ3 337 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 TRILQ7L0X0 811 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 MEPCEQ7L2J0 689 aaKnown RBP4.47□□□□□ -1.69
VTI1B-202ENST00000553619 CXXC5Q7LFL8 322 aaKnown RBP4.47□□□□□ -1.69
VTI1B-202ENST00000553619 ADCK1Q86TW2 530 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 UBQLNLQ8IYU4 475 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 ENTHD1Q8IYW4 607 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 GHDCQ8N2G8 530 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 ARIH2OSQ8N7S6 290 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 RBMXL3Q8N7X1 1067 aaKnown RBP4.47□□□□□ -1.69
VTI1B-202ENST00000553619 ZNF540Q8NDQ6 660 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 BPIFB6Q8NFQ5 453 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 OR5M1Q8NGP8 315 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 OR13C2Q8NGS9 318 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 SMPDL3BQ92485 455 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 ZNF566Q969W8 418 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 OTULINQ96BN8 352 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 MRPL48Q96GC5 212 aaKnown RBP4.47□□□□□ -1.69
VTI1B-202ENST00000553619 MOGAT1Q96PD6 335 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 PTDSS2Q9BVG9 487 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 MCCC2Q9HCC0 563 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 GLRX2Q9NS18 164 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 RASSF1Q9NS23 344 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 PARPBPQ9NWS1 579 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 CNOT2Q9NZN8 540 aaKnown RBP4.47□□□□□ -1.69
VTI1B-202ENST00000553619 WARS2Q9UGM6 360 aaKnown RBP4.47□□□□□ -1.69
VTI1B-202ENST00000553619 SCOCQ9UIL1 159 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 NPIPA1Q9UND3 350 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 RNF6Q9Y252 685 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 SNX5Q9Y5X3 404 aa4.47□□□□□ -1.69
VTI1B-202ENST00000553619 ACACAQ13085 2346 aa4.46□□□□□ -1.69
VTI1B-202ENST00000553619 DNAH14Q0VDD8 3507 aa4.46□□□□□ -1.69
VTI1B-202ENST00000553619 TNRC6AQ8NDV7 1962 aaKnown RBP4.46□□□□□ -1.7
VTI1B-202ENST00000553619 A0A0G2JMM0 328 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 A0A1W2PNV4 684 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 A0A1W2PPB8 328 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 A0A1W2PRS3 328 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 CLCA1A8K7I4 914 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 KIR3DP1A8MWS1 328 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 LRRN3E7EW58 273 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 PTGES3LE9PB15 166 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 TAF4O00268 1085 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 TNFSF11O14788 317 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms