RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 CDH5P33151 784 aaPredicted RBP3.09□□□□□ -1.91
TDP1-207ENST00000553617 MAS1LP35410 378 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 AQP2P41181 271 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 OR1D4P47884 311 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 NPBWR2P48146 333 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 ACLYP53396 1101 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 UCNP55089 124 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 RAB40BQ12829 278 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 LAGE3Q14657 143 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 TRAM2Q15035 370 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 TMED2Q15363 201 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 MRPL23Q16540 153 aaKnown RBP3.09□□□□□ -1.91
TDP1-207ENST00000553617 CYP51A1Q16850 503 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 SFT2D3Q587I9 215 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 OR4F3Q6IEY1 312 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 FAHD2BQ6P2I3 314 aaPredicted RBP3.09□□□□□ -1.91
TDP1-207ENST00000553617 DOK6Q6PKX4 331 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 PGAP1Q75T13 922 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 CATSPER3Q86XQ3 398 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 HIPK1Q86Z02 1210 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 CRLF3Q8IUI8 442 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 MMAAQ8IVH4 418 aaKnown RBP3.09□□□□□ -1.91
TDP1-207ENST00000553617 FUNDC1Q8IVP5 155 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 CMTM8Q8IZV2 173 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 C4orf32Q8N8J7 132 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 OR7G2Q8NG99 324 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 OR9A4Q8NGU2 314 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 RFESDQ8TAC1 157 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 ACTL9Q8TC94 416 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 TMEM239Q8WW34 195 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 SMARCD2Q92925 531 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 FAHD2AQ96GK7 314 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 ZNF597Q96LX8 424 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 MBOAT7Q96N66 472 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 OR5B2Q96R09 309 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 CHCHD5Q9BSY4 110 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 DPH7Q9BTV6 452 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 SLITRK2Q9H156 845 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 TPK1Q9H3S4 243 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 WDR54Q9H977 334 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 SCRT2Q9NQ03 307 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 ASCL3Q9NQ33 180 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 POLE4Q9NR33 117 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 PARVAQ9NVD7 372 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 TAS2R9Q9NYW1 312 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 WRAP73Q9P2S5 460 aaPredicted RBP3.09□□□□□ -1.91
TDP1-207ENST00000553617 ENOPH1Q9UHY7 261 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 TBL2Q9Y4P3 447 aaKnown RBP3.09□□□□□ -1.91
TDP1-207ENST00000553617 TSSC4Q9Y5U2 329 aaPredicted RBP3.09□□□□□ -1.91
TDP1-207ENST00000553617 WIF1Q9Y5W5 379 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 HCFC1P51610 2035 aa3.09□□□□□ -1.92
TDP1-207ENST00000553617 TMEM213A2RRL7 107 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 LRP5LA4QPB2 252 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 ZNF840PA6NDX5 716 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 EFCAB10A6NFE3 127 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 SAGE2PA6NJ88 616 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 SYCE1LA8MT33 242 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 A8MX80 341 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 A8MXK9 166 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 ZNF99A8MXY4 864 aaPredicted RBP3.08□□□□□ -1.92
TDP1-207ENST00000553617 BIRC5O15392 142 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 B4GALT5O43286 388 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 XRCC2O43543 280 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 LATO43561 262 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 ZG16O60844 167 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 OR2J3O76001 311 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 VAPBO95292 243 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 ETHE1O95571 254 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 IGHG4P01861 327 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 SMIM10L1P0DMW3 83 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 CD82P27701 267 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 SERPINB1P30740 379 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 KDELR2P33947 212 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 ACVR1BP36896 505 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 CFHR2P36980 270 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 TGFBR2P37173 567 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 MAP3K8P41279 467 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 RGS6P49758 472 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 KPNA2P52292 529 aaKnown RBP3.08□□□□□ -1.92
TDP1-207ENST00000553617 EFNB2P52799 333 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 PLP1P60201 277 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 LCN2P80188 198 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 MGAT3Q09327 533 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 ZNF154Q13106 437 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 CRMP1Q14194 572 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 FLOT2Q14254 428 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 CYTH1Q15438 398 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 SLC15A2Q16348 729 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 QRICH1Q2TAL8 776 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 HES5Q5TA89 166 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 ZNF57Q68EA5 555 aaPredicted RBP3.08□□□□□ -1.92
TDP1-207ENST00000553617 DUPD1Q68J44 220 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 ADNP2Q6IQ32 1131 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 ZNF530Q6P9A1 599 aaPredicted RBP3.08□□□□□ -1.92
TDP1-207ENST00000553617 ULK3Q6PHR2 472 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 REG3GQ6UW15 175 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 UQCC3Q6UW78 93 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 METTL7BQ6UX53 244 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 APTXQ7Z2E3 356 aaKnown RBP3.08□□□□□ -1.92
TDP1-207ENST00000553617 PRSS58Q8IYP2 241 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms