RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 A0A096LPE4 126 aa10.19□□□□□ -0.78
SRP54-203ENST00000553544 A0A1W2PPZ6 126 aa10.19□□□□□ -0.78
SRP54-203ENST00000553544 ZNF99A8MXY4 864 aaPredicted RBP10.19□□□□□ -0.78
SRP54-203ENST00000553544 ASAH2BP0C7U1 165 aa10.19□□□□□ -0.78
SRP54-203ENST00000553544 COX4I1P13073 169 aa10.19□□□□□ -0.78
SRP54-203ENST00000553544 KDELR2P33947 212 aa10.19□□□□□ -0.78
SRP54-203ENST00000553544 UBE2NP61088 152 aaKnown RBP10.19□□□□□ -0.78
SRP54-203ENST00000553544 POU3F1Q03052 451 aaPredicted RBP10.19□□□□□ -0.78
SRP54-203ENST00000553544 RIN1Q13671 783 aa10.19□□□□□ -0.78
SRP54-203ENST00000553544 C8orf82Q6P1X6 216 aaPredicted RBP10.19□□□□□ -0.78
SRP54-203ENST00000553544 SHQ1Q6PI26 577 aaKnown RBP10.19□□□□□ -0.78
SRP54-203ENST00000553544 HACD2Q6Y1H2 254 aa10.19□□□□□ -0.78
SRP54-203ENST00000553544 ZNF627Q7L945 461 aa10.19□□□□□ -0.78
SRP54-203ENST00000553544 PEG10Q86TG7 708 aaKnown RBP10.19□□□□□ -0.78
SRP54-203ENST00000553544 CARM1Q86X55 608 aa10.19□□□□□ -0.78
SRP54-203ENST00000553544 SLC15A3Q8IY34 581 aa10.19□□□□□ -0.78
SRP54-203ENST00000553544 ZCCHC24Q8N2G6 241 aaKnown RBP10.19□□□□□ -0.78
SRP54-203ENST00000553544 GPR137CQ8N3F9 429 aa10.19□□□□□ -0.78
SRP54-203ENST00000553544 POU5F2Q8N7G0 328 aa10.19□□□□□ -0.78
SRP54-203ENST00000553544 RCN3Q96D15 328 aa10.19□□□□□ -0.78
SRP54-203ENST00000553544 JMJD8Q96S16 334 aa10.19□□□□□ -0.78
SRP54-203ENST00000553544 DOK1Q99704 481 aa10.19□□□□□ -0.78
SRP54-203ENST00000553544 RBM4Q9BWF3 364 aaKnown RBP10.19□□□□□ -0.78
SRP54-203ENST00000553544 POLR2J2Q9GZM3 115 aaKnown RBP10.19□□□□□ -0.78
SRP54-203ENST00000553544 POLR2J3Q9H1A7 115 aaKnown RBP10.19□□□□□ -0.78
SRP54-203ENST00000553544 MOV10Q9HCE1 1003 aaKnown RBP10.19□□□□□ -0.78
SRP54-203ENST00000553544 MEPEQ9NQ76 525 aaPredicted RBP10.19□□□□□ -0.78
SRP54-203ENST00000553544 HIF1ANQ9NWT6 349 aa10.19□□□□□ -0.78
SRP54-203ENST00000553544 CMTM6Q9NX76 183 aa10.19□□□□□ -0.78
SRP54-203ENST00000553544 ZNF229Q9UJW7 825 aa10.19□□□□□ -0.78
SRP54-203ENST00000553544 GRIP1Q9Y3R0 1128 aa10.19□□□□□ -0.78
SRP54-203ENST00000553544 ELOVL7A1L3X0 281 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 ZNF503-AS2A6NEH8 195 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 hCG_2039718K7EN88 272 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 M0R3G1 203 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 OR5F1O95221 314 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 FAM107AO95990 144 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 CH25HO95992 272 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 IGF2P01344 180 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 CECR9P0C854 216 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 ADORA3P0DMS8 318 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 CBR1P16152 277 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 TNFRSF1BP20333 461 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 NPR2P20594 1047 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 AHCYP23526 432 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 SELENOWP63302 87 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 TUBA1BP68363 451 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 TUBA4AP68366 448 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 IL1RL1Q01638 556 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 NAAAQ02083 359 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 TRIP10Q15642 601 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 CYBRD1Q53TN4 286 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 USP43Q70EL4 1123 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 TUBA1AQ71U36 451 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 TREML1Q86YW5 311 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 NKAIN4Q8IVV8 208 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 CCDC36Q8IYA8 594 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 MICU2Q8IYU8 434 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 C10orf53Q8N6V4 93 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 LRRC17Q8N6Y2 441 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 OR2T12Q8NG77 320 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 NANSQ9NR45 359 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 B3GNT2Q9NY97 397 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 RIMS3Q9UJD0 308 aa10.18□□□□□ -0.78
SRP54-203ENST00000553544 SH3PXD2BA1X283 911 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 ZNF726A6NNF4 738 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 GMNNO75496 209 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 RGS9O75916 674 aaPredicted RBP10.17□□□□□ -0.78
SRP54-203ENST00000553544 MT-ND1P03886 318 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 TSPAN19P0C672 248 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 THRBP10828 461 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 IFNA8P32881 189 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 THBS4P35443 961 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 RBM34P42696 430 aaKnown RBP10.17□□□□□ -0.78
SRP54-203ENST00000553544 OR1E2P47887 323 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 LIMS1P48059 325 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 NUDT2P50583 147 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 HILS1P60008 231 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 PIN1Q13526 163 aaPredicted RBP10.17□□□□□ -0.78
SRP54-203ENST00000553544 CAMK2DQ13557 499 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 CCNIQ14094 377 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 PDLIM3Q53GG5 364 aaPredicted RBP10.17□□□□□ -0.78
SRP54-203ENST00000553544 PRR31Q5SQ13 230 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 CARD17Q5XLA6 110 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 SVOPLQ8N434 492 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 TEX29Q8N6K0 151 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 CCDC197Q8NCU1 140 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 NUP37Q8NFH4 326 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 OR6X1Q8NH79 312 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 LIPHQ8WWY8 451 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 LZICQ8WZA0 190 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 TMEM54Q969K7 222 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 TMEM186Q96B77 213 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 ZNF75AQ96N20 296 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 CCT8L2Q96SF2 557 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 MYLK2Q9H1R3 596 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 ZNF442Q9H7R0 627 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 SEC61A2Q9H9S3 476 aa10.17□□□□□ -0.78
SRP54-203ENST00000553544 GMPR2Q9P2T1 348 aaKnown RBP10.17□□□□□ -0.78
SRP54-203ENST00000553544 SPEF1Q9Y4P9 236 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms