RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 DCBLD2Q96PD2 775 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 TSSK2Q96PF2 358 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 TGIF2Q9GZN2 237 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 DUSP15Q9H1R2 295 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-205ENST00000553474 SYT4Q9H2B2 425 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 TXNIPQ9H3M7 391 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 IKZF2Q9UKS7 526 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 CLEC4AQ9UMR7 237 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 BOLA1Q9Y3E2 137 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 PRSS37A4D1T9 235 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 ANXA2P2A6NMY6 339 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 A8MUA0 341 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 IDSB3KWA1 339 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 DCTN6O00399 190 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 KHNYNO15037 678 aaKnown RBP11.67□□□□□ -0.54
SHMT2-205ENST00000553474 FADS1O60427 444 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 ANXA2P07355 339 aaKnown RBP11.67□□□□□ -0.54
SHMT2-205ENST00000553474 PSMB1P20618 241 aaKnown RBP11.67□□□□□ -0.54
SHMT2-205ENST00000553474 MAP2K6P52564 334 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 SLC26A5P58743 744 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 ROM1Q03395 351 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 FCN2Q15485 313 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 Q5BKY6 102 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 WDR45BQ5MNZ6 344 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 HES5Q5TA89 166 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 ARHGAP40Q5TG30 622 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 NKAIN2Q5VXU1 208 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 FAM205BPQ63HN1 556 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 OLFML2AQ68BL7 652 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 FCRLAQ7L513 359 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 DPY19L4Q7Z388 723 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 LRRTM1Q86UE6 522 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 ZNF227Q86WZ6 799 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 ZNF679Q8IYX0 411 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 DND1Q8IYX4 353 aaKnown RBP11.67□□□□□ -0.54
SHMT2-205ENST00000553474 ZNF676Q8N7Q3 588 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 ZNF454Q8N9F8 522 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 ZNF519Q8TB69 540 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 DNASE2BQ8WZ79 361 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 MCHR2Q969V1 340 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 PHF21AQ96BD5 680 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 MED30Q96HR3 178 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 RADILQ96JH8 1075 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 SLC17A5Q9NRA2 495 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 TAS2R8Q9NYW2 309 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 DHCR7Q9UBM7 475 aaKnown RBP11.67□□□□□ -0.54
SHMT2-205ENST00000553474 OR5V1Q9UGF6 321 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 FOXJ3Q9UPW0 622 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 KLHDC2Q9Y2U9 406 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 TMED7-TICAM2A0A0A6YYA0 188 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 A0A0B4J203 849 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 ANKRD20A5PA0PJZ0 165 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 NPIPB13A6NJU9 1138 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 FAM171A2A8MVW0 826 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 NPIPB4C9JG80 1138 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 FABP7O15540 132 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 RPP14O95059 124 aaKnown RBP11.67□□□□□ -0.54
SHMT2-205ENST00000553474 AKR7A3O95154 331 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 NUDT14O95848 222 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 CRABP1P29762 137 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 GRPRP30550 384 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 FAUP35544 74 aaKnown RBP11.67□□□□□ -0.54
SHMT2-205ENST00000553474 PTH2RP49190 550 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 SUMO3P55854 103 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-205ENST00000553474 OR1D5P58170 312 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 GNG2P59768 71 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 TOMM20Q15388 145 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 TEX30Q5JUR7 227 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 METTL11BQ5VVY1 283 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 SLC18B1Q6NT16 456 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 MARCH3Q86UD3 253 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 DTX3Q8N9I9 347 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 SYNPRQ8TBG9 265 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 ST8SIA1Q92185 356 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 PIGKQ92643 395 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 OR8B4Q96RC9 309 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 UTP23Q9BRU9 249 aaKnown RBP11.67□□□□□ -0.54
SHMT2-205ENST00000553474 PTDSS2Q9BVG9 487 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 VN1R1Q9GZP7 353 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 SLC25A18Q9H1K4 315 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 C20orf85Q9H1P6 137 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 TSPAN10Q9H1Z9 355 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-205ENST00000553474 ZNF768Q9H5H4 540 aaKnown RBP11.67□□□□□ -0.54
SHMT2-205ENST00000553474 CCDC86Q9H6F5 360 aaKnown RBP11.67□□□□□ -0.54
SHMT2-205ENST00000553474 FAM86C1Q9NVL1 165 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 STEAP1Q9UHE8 339 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 FBXL3Q9UKT7 428 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 TMED7Q9Y3B3 224 aa11.67□□□□□ -0.54
SHMT2-205ENST00000553474 CPAMD8Q8IZJ3 1885 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 VPS13AQ96RL7 3174 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 MEIKINA0A087WXM9 373 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 A0A1B0GUH1 482 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 ANKRD34BA5PLL1 514 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 SUSD5O60279 629 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 AHSA1O95433 338 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 SULT1A3P0DMM9 295 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 SULT1A4P0DMN0 295 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 MECP2P51608 486 aaKnown RBP11.66□□□□□ -0.54
SHMT2-205ENST00000553474 AFF3P51826 1226 aaKnown RBP11.66□□□□□ -0.54
SHMT2-205ENST00000553474 DLX5P56178 289 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms