RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 ARPC2O15144 300 aa13.34□□□□□ -0.27
SHMT2-204ENST00000553324 PIP5K1CO60331 668 aa13.34□□□□□ -0.27
SHMT2-204ENST00000553324 TRMUO75648 421 aaKnown RBP13.34□□□□□ -0.27
SHMT2-204ENST00000553324 CECR9P0C854 216 aa13.34□□□□□ -0.27
SHMT2-204ENST00000553324 B4GALT1P15291 398 aa13.34□□□□□ -0.27
SHMT2-204ENST00000553324 NPR2P20594 1047 aa13.34□□□□□ -0.27
SHMT2-204ENST00000553324 MSX2P35548 267 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-204ENST00000553324 GUCA1AP43080 201 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-204ENST00000553324 CTXN1P60606 82 aa13.34□□□□□ -0.27
SHMT2-204ENST00000553324 RAP1BP61224 184 aa13.34□□□□□ -0.27
SHMT2-204ENST00000553324 RPL27P61353 136 aaKnown RBP13.34□□□□□ -0.27
SHMT2-204ENST00000553324 RAB1AP62820 205 aa13.34□□□□□ -0.27
SHMT2-204ENST00000553324 RAP1AP62834 184 aa13.34□□□□□ -0.27
SHMT2-204ENST00000553324 LSM11P83369 360 aaKnown RBP eCLIP13.34□□□□□ -0.27
SHMT2-204ENST00000553324 ZBED5Q49AG3 693 aa13.34□□□□□ -0.27
SHMT2-204ENST00000553324 MTX3Q5HYI7 312 aa13.34□□□□□ -0.27
SHMT2-204ENST00000553324 THEM4Q5T1C6 240 aa13.34□□□□□ -0.27
SHMT2-204ENST00000553324 PODNL1Q6PEZ8 512 aa13.34□□□□□ -0.27
SHMT2-204ENST00000553324 TBPL2Q6SJ96 375 aa13.34□□□□□ -0.27
SHMT2-204ENST00000553324 TSEN54Q7Z6J9 526 aaKnown RBP13.34□□□□□ -0.27
SHMT2-204ENST00000553324 MDP1Q86V88 176 aa13.34□□□□□ -0.27
SHMT2-204ENST00000553324 WDFY1Q8IWB7 410 aa13.34□□□□□ -0.27
SHMT2-204ENST00000553324 SLC22A24Q8N4F4 322 aa13.34□□□□□ -0.27
SHMT2-204ENST00000553324 RBM15BQ8NDT2 890 aaKnown RBP13.34□□□□□ -0.27
SHMT2-204ENST00000553324 NOXO1Q8NFA2 376 aa13.34□□□□□ -0.27
SHMT2-204ENST00000553324 OR51A7Q8NH64 312 aa13.34□□□□□ -0.27
SHMT2-204ENST00000553324 Q96MF0 132 aa13.34□□□□□ -0.27
SHMT2-204ENST00000553324 TNFRSF13CQ96RJ3 184 aa13.34□□□□□ -0.27
SHMT2-204ENST00000553324 ALG12Q9BV10 488 aa13.34□□□□□ -0.27
SHMT2-204ENST00000553324 C1orf21Q9H246 121 aa13.34□□□□□ -0.27
SHMT2-204ENST00000553324 IL1RAPQ9NPH3 570 aa13.34□□□□□ -0.27
SHMT2-204ENST00000553324 TMEM38BQ9NVV0 291 aa13.34□□□□□ -0.27
SHMT2-204ENST00000553324 ACTR3BQ9P1U1 418 aa13.34□□□□□ -0.27
SHMT2-204ENST00000553324 PMF1-BGLAPU3KQ54 211 aa13.34□□□□□ -0.27
SHMT2-204ENST00000553324 ARID1AO14497 2285 aa13.33□□□□□ -0.28
SHMT2-204ENST00000553324 RAI1Q7Z5J4 1906 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-204ENST00000553324 FAM171A2A8MVW0 826 aa13.33□□□□□ -0.28
SHMT2-204ENST00000553324 ATP6V1G2-DDX39BF2Z307 99 aa13.33□□□□□ -0.28
SHMT2-204ENST00000553324 hCG_2039718K7EN88 272 aa13.33□□□□□ -0.28
SHMT2-204ENST00000553324 SEC14L2O76054 403 aa13.33□□□□□ -0.28
SHMT2-204ENST00000553324 RAB36O95755 333 aa13.33□□□□□ -0.28
SHMT2-204ENST00000553324 IGHMP01871 453 aa13.33□□□□□ -0.28
SHMT2-204ENST00000553324 HLA-HP01893 362 aa13.33□□□□□ -0.28
SHMT2-204ENST00000553324 FABP3P05413 133 aa13.33□□□□□ -0.28
SHMT2-204ENST00000553324 IFNGR2P38484 337 aa13.33□□□□□ -0.28
SHMT2-204ENST00000553324 IDH3GP51553 393 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-204ENST00000553324 ZNF133P52736 654 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-204ENST00000553324 VLDLRP98155 873 aa13.33□□□□□ -0.28
SHMT2-204ENST00000553324 RUNX1T1Q06455 604 aa13.33□□□□□ -0.28
SHMT2-204ENST00000553324 NPRL3Q12980 569 aa13.33□□□□□ -0.28
SHMT2-204ENST00000553324 RAB35Q15286 201 aa13.33□□□□□ -0.28
SHMT2-204ENST00000553324 FGD3Q5JSP0 725 aa13.33□□□□□ -0.28
SHMT2-204ENST00000553324 SYT14Q8NB59 555 aa13.33□□□□□ -0.28
SHMT2-204ENST00000553324 NUP37Q8NFH4 326 aa13.33□□□□□ -0.28
SHMT2-204ENST00000553324 BCAS4Q8TDM0 211 aa13.33□□□□□ -0.28
SHMT2-204ENST00000553324 C18orf12Q96KH6 178 aa13.33□□□□□ -0.28
SHMT2-204ENST00000553324 DHRS1Q96LJ7 313 aa13.33□□□□□ -0.28
SHMT2-204ENST00000553324 KCNN2Q9H2S1 579 aa13.33□□□□□ -0.28
SHMT2-204ENST00000553324 DLL4Q9NR61 685 aa13.33□□□□□ -0.28
SHMT2-204ENST00000553324 CA10Q9NS85 328 aa13.33□□□□□ -0.28
SHMT2-204ENST00000553324 ZNF346Q9UL40 294 aaKnown RBP13.33□□□□□ -0.28
SHMT2-204ENST00000553324 AURKCQ9UQB9 309 aa13.33□□□□□ -0.28
SHMT2-204ENST00000553324 SPEF1Q9Y4P9 236 aa13.33□□□□□ -0.28
SHMT2-204ENST00000553324 TRAV27A0A087WT01 109 aa13.32□□□□□ -0.28
SHMT2-204ENST00000553324 AHCYL1O43865 530 aa13.32□□□□□ -0.28
SHMT2-204ENST00000553324 KRT36O76013 467 aa13.32□□□□□ -0.28
SHMT2-204ENST00000553324 PDE5AO76074 875 aa13.32□□□□□ -0.28
SHMT2-204ENST00000553324 GADD45GO95257 159 aa13.32□□□□□ -0.28
SHMT2-204ENST00000553324 PTHP01270 115 aa13.32□□□□□ -0.28
SHMT2-204ENST00000553324 SEMG1P04279 462 aa13.32□□□□□ -0.28
SHMT2-204ENST00000553324 FUT4P22083 530 aa13.32□□□□□ -0.28
SHMT2-204ENST00000553324 RPL4P36578 427 aaKnown RBP13.32□□□□□ -0.28
SHMT2-204ENST00000553324 SERPINF1P36955 418 aa13.32□□□□□ -0.28
SHMT2-204ENST00000553324 CDKN1AP38936 164 aa13.32□□□□□ -0.28
SHMT2-204ENST00000553324 PIGFQ07326 219 aa13.32□□□□□ -0.28
SHMT2-204ENST00000553324 CD47Q08722 323 aa13.32□□□□□ -0.28
SHMT2-204ENST00000553324 SLC36A2Q495M3 483 aa13.32□□□□□ -0.28
SHMT2-204ENST00000553324 C10orf128Q5T292 105 aa13.32□□□□□ -0.28
SHMT2-204ENST00000553324 C11orf71Q6IPW1 123 aa13.32□□□□□ -0.28
SHMT2-204ENST00000553324 B3GLCTQ6Y288 498 aa13.32□□□□□ -0.28
SHMT2-204ENST00000553324 SKA3Q8IX90 412 aa13.32□□□□□ -0.28
SHMT2-204ENST00000553324 FAM86B1Q8N7N1 296 aa13.32□□□□□ -0.28
SHMT2-204ENST00000553324 LRRC75AQ8NAA5 344 aa13.32□□□□□ -0.28
SHMT2-204ENST00000553324 SIAEQ9HAT2 523 aa13.32□□□□□ -0.28
SHMT2-204ENST00000553324 GRHPRQ9UBQ7 328 aa13.32□□□□□ -0.28
SHMT2-204ENST00000553324 PRPF19Q9UMS4 504 aaKnown RBP13.32□□□□□ -0.28
SHMT2-204ENST00000553324 V9GYQ6 96 aa13.32□□□□□ -0.28
SHMT2-204ENST00000553324 IGHV2OR16-5A0A0B4J2B6 119 aa13.31□□□□□ -0.28
SHMT2-204ENST00000553324 B9A039 149 aa13.31□□□□□ -0.28
SHMT2-204ENST00000553324 CDC42EP2O14613 210 aa13.31□□□□□ -0.28
SHMT2-204ENST00000553324 STAMBPO95630 424 aa13.31□□□□□ -0.28
SHMT2-204ENST00000553324 SERPINA5P05154 406 aa13.31□□□□□ -0.28
SHMT2-204ENST00000553324 CD14P08571 375 aa13.31□□□□□ -0.28
SHMT2-204ENST00000553324 T-ENOLP0DO92 83 aa13.31□□□□□ -0.28
SHMT2-204ENST00000553324 ZNF14P17017 642 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-204ENST00000553324 ACVR1BP36896 505 aa13.31□□□□□ -0.28
SHMT2-204ENST00000553324 GPR4P46093 362 aa13.31□□□□□ -0.28
SHMT2-204ENST00000553324 GIPRP48546 466 aa13.31□□□□□ -0.28
SHMT2-204ENST00000553324 PTDSS1P48651 473 aaKnown RBP13.31□□□□□ -0.28
SHMT2-204ENST00000553324 TOP3AQ13472 1001 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms