RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 MYBPC1Q00872 1141 aa16.13■□□□□ 0.17
PRPF40B-216ENST00000552301 RUNX1T1Q06455 604 aa16.13■□□□□ 0.17
PRPF40B-216ENST00000552301 DEFB113Q30KQ7 82 aa16.13■□□□□ 0.17
PRPF40B-216ENST00000552301 SPATA24Q86W54 205 aa16.13■□□□□ 0.17
PRPF40B-216ENST00000552301 LRRC75AQ8NAA5 344 aa16.13■□□□□ 0.17
PRPF40B-216ENST00000552301 FNDC8Q8TC99 324 aa16.13■□□□□ 0.17
PRPF40B-216ENST00000552301 TMEM171Q8WVE6 324 aa16.13■□□□□ 0.17
PRPF40B-216ENST00000552301 NEUROG1Q92886 237 aa16.13■□□□□ 0.17
PRPF40B-216ENST00000552301 MCHR2Q969V1 340 aa16.13■□□□□ 0.17
PRPF40B-216ENST00000552301 MBD6Q96DN6 1003 aa16.13■□□□□ 0.17
PRPF40B-216ENST00000552301 RBP7Q96R05 134 aa16.13■□□□□ 0.17
PRPF40B-216ENST00000552301 FOXC2Q99958 501 aa16.13■□□□□ 0.17
PRPF40B-216ENST00000552301 FUZQ9BT04 418 aa16.13■□□□□ 0.17
PRPF40B-216ENST00000552301 MRPL13Q9BYD1 178 aaKnown RBP16.13■□□□□ 0.17
PRPF40B-216ENST00000552301 REEP1Q9H902 201 aa16.13■□□□□ 0.17
PRPF40B-216ENST00000552301 FAIMQ9NVQ4 179 aa16.13■□□□□ 0.17
PRPF40B-216ENST00000552301 BEX4Q9NWD9 120 aaPredicted RBP16.13■□□□□ 0.17
PRPF40B-216ENST00000552301 GRHPRQ9UBQ7 328 aa16.13■□□□□ 0.17
PRPF40B-216ENST00000552301 ZNF346Q9UL40 294 aaKnown RBP16.13■□□□□ 0.17
PRPF40B-216ENST00000552301 HRNRQ86YZ3 2850 aaPredicted RBP16.12■□□□□ 0.17
PRPF40B-216ENST00000552301 TACC2O95359 2948 aa16.12■□□□□ 0.17
PRPF40B-216ENST00000552301 DHRS12A0PJE2 317 aa16.12■□□□□ 0.17
PRPF40B-216ENST00000552301 SHISA9B4DS77 424 aa16.12■□□□□ 0.17
PRPF40B-216ENST00000552301 HOXB6P17509 224 aaKnown RBP16.12■□□□□ 0.17
PRPF40B-216ENST00000552301 ARR3P36575 388 aa16.12■□□□□ 0.17
PRPF40B-216ENST00000552301 IDH3GP51553 393 aaPredicted RBP16.12■□□□□ 0.17
PRPF40B-216ENST00000552301 ERVK-25P63136 954 aa16.12■□□□□ 0.17
PRPF40B-216ENST00000552301 SPOCK1Q08629 439 aa16.12■□□□□ 0.17
PRPF40B-216ENST00000552301 NPRL3Q12980 569 aa16.12■□□□□ 0.17
PRPF40B-216ENST00000552301 PGM2L1Q6PCE3 622 aa16.12■□□□□ 0.17
PRPF40B-216ENST00000552301 LRFN4Q6PJG9 635 aa16.12■□□□□ 0.17
PRPF40B-216ENST00000552301 ZNF627Q7L945 461 aa16.12■□□□□ 0.17
PRPF40B-216ENST00000552301 LINC00471Q8N535 108 aa16.12■□□□□ 0.17
PRPF40B-216ENST00000552301 FANK1Q8TC84 345 aa16.12■□□□□ 0.17
PRPF40B-216ENST00000552301 HDAC2Q92769 488 aaKnown RBP16.12■□□□□ 0.17
PRPF40B-216ENST00000552301 ZNF570Q96NI8 536 aa16.12■□□□□ 0.17
PRPF40B-216ENST00000552301 TSPAN32Q96QS1 320 aa16.12■□□□□ 0.17
PRPF40B-216ENST00000552301 TMEM38BQ9NVV0 291 aa16.12■□□□□ 0.17
PRPF40B-216ENST00000552301 CISD1Q9NZ45 108 aaKnown RBP16.12■□□□□ 0.17
PRPF40B-216ENST00000552301 SIGLEC7Q9Y286 467 aa16.12■□□□□ 0.17
PRPF40B-216ENST00000552301 SAMHD1Q9Y3Z3 626 aaKnown RBP16.12■□□□□ 0.17
PRPF40B-216ENST00000552301 LYVE1Q9Y5Y7 322 aa16.12■□□□□ 0.17
PRPF40B-216ENST00000552301 ATP23Q9Y6H3 246 aa16.12■□□□□ 0.17
PRPF40B-216ENST00000552301 PDZD2O15018 2839 aa16.11■□□□□ 0.17
PRPF40B-216ENST00000552301 PLCE1Q9P212 2302 aa16.11■□□□□ 0.17
PRPF40B-216ENST00000552301 IGHV1-18A0A0C4DH31 117 aa16.11■□□□□ 0.17
PRPF40B-216ENST00000552301 GSC2O15499 205 aa16.11■□□□□ 0.17
PRPF40B-216ENST00000552301 SMPD2O60906 423 aa16.11■□□□□ 0.17
PRPF40B-216ENST00000552301 UBL3O95164 117 aa16.11■□□□□ 0.17
PRPF40B-216ENST00000552301 RAB36O95755 333 aa16.11■□□□□ 0.17
PRPF40B-216ENST00000552301 HLA-HP01893 362 aa16.11■□□□□ 0.17
PRPF40B-216ENST00000552301 CRYAAP02489 173 aa16.11■□□□□ 0.17
PRPF40B-216ENST00000552301 OR8G3PP0DMU2 310 aa16.11■□□□□ 0.17
PRPF40B-216ENST00000552301 CBR1P16152 277 aa16.11■□□□□ 0.17
PRPF40B-216ENST00000552301 FPR3P25089 353 aa16.11■□□□□ 0.17
PRPF40B-216ENST00000552301 FHL1Q13642 323 aa16.11■□□□□ 0.17
PRPF40B-216ENST00000552301 GSG1Q2KHT4 349 aa16.11■□□□□ 0.17
PRPF40B-216ENST00000552301 C3orf36Q3SXR2 165 aa16.11■□□□□ 0.17
PRPF40B-216ENST00000552301 OR2T5Q6IEZ7 315 aa16.11■□□□□ 0.17
PRPF40B-216ENST00000552301 ZER1Q7Z7L7 766 aa16.11■□□□□ 0.17
PRPF40B-216ENST00000552301 MDP1Q86V88 176 aa16.11■□□□□ 0.17
PRPF40B-216ENST00000552301 ARIH2OSQ8N7S6 290 aa16.11■□□□□ 0.17
PRPF40B-216ENST00000552301 FAM169BQ8N8A8 192 aa16.11■□□□□ 0.17
PRPF40B-216ENST00000552301 OR2T29Q8NH02 315 aa16.11■□□□□ 0.17
PRPF40B-216ENST00000552301 GNPDA2Q8TDQ7 276 aa16.11■□□□□ 0.17
PRPF40B-216ENST00000552301 CADM1Q9BY67 442 aaKnown RBP16.11■□□□□ 0.17
PRPF40B-216ENST00000552301 CXorf56Q9H5V9 222 aa16.11■□□□□ 0.17
PRPF40B-216ENST00000552301 SMURF2Q9HAU4 748 aa16.11■□□□□ 0.17
PRPF40B-216ENST00000552301 CRNNQ9UBG3 495 aaPredicted RBP16.11■□□□□ 0.17
PRPF40B-216ENST00000552301 ADAM18Q9Y3Q7 739 aa16.11■□□□□ 0.17
PRPF40B-216ENST00000552301 RAI1Q7Z5J4 1906 aaPredicted RBP16.11■□□□□ 0.17
PRPF40B-216ENST00000552301 ATP6V1G2-DDX39BF2Z307 99 aa16.1■□□□□ 0.17
PRPF40B-216ENST00000552301 ARHGEF9O43307 516 aa16.1■□□□□ 0.17
PRPF40B-216ENST00000552301 CCNB2O95067 398 aa16.1■□□□□ 0.17
PRPF40B-216ENST00000552301 SLC2A10O95528 541 aa16.1■□□□□ 0.17
PRPF40B-216ENST00000552301 CECR9P0C854 216 aa16.1■□□□□ 0.17
PRPF40B-216ENST00000552301 GUCA1AP43080 201 aaPredicted RBP16.1■□□□□ 0.17
PRPF40B-216ENST00000552301 RPS6KA3P51812 740 aa16.1■□□□□ 0.17
PRPF40B-216ENST00000552301 HIST3H3Q16695 136 aa16.1■□□□□ 0.17
PRPF40B-216ENST00000552301 C10orf128Q5T292 105 aa16.1■□□□□ 0.17
PRPF40B-216ENST00000552301 GPR139Q6DWJ6 353 aa16.1■□□□□ 0.17
PRPF40B-216ENST00000552301 SMARCD3Q6STE5 483 aa16.1■□□□□ 0.17
PRPF40B-216ENST00000552301 ADGRG5Q8IZF4 528 aa16.1■□□□□ 0.17
PRPF40B-216ENST00000552301 SLC22A24Q8N4F4 322 aa16.1■□□□□ 0.17
PRPF40B-216ENST00000552301 LILRB1Q8NHL6 650 aaPredicted RBP16.1■□□□□ 0.17
PRPF40B-216ENST00000552301 ZNF519Q8TB69 540 aa16.1■□□□□ 0.17
PRPF40B-216ENST00000552301 SMAP2Q8WU79 429 aaPredicted RBP16.1■□□□□ 0.17
PRPF40B-216ENST00000552301 NSMAFQ92636 917 aa16.1■□□□□ 0.17
PRPF40B-216ENST00000552301 KCNK17Q96T54 332 aa16.1■□□□□ 0.17
PRPF40B-216ENST00000552301 CHID1Q9BWS9 393 aa16.1■□□□□ 0.17
PRPF40B-216ENST00000552301 YY1AP1Q9H869 796 aa16.1■□□□□ 0.17
PRPF40B-216ENST00000552301 LAMP3Q9UQV4 416 aa16.1■□□□□ 0.17
PRPF40B-216ENST00000552301 POMPQ9Y244 141 aa16.1■□□□□ 0.17
PRPF40B-216ENST00000552301 GNGT2O14610 69 aa16.09■□□□□ 0.17
PRPF40B-216ENST00000552301 TMCC2O75069 709 aa16.09■□□□□ 0.17
PRPF40B-216ENST00000552301 PTP4A3O75365 173 aa16.09■□□□□ 0.17
PRPF40B-216ENST00000552301 IGKV3-15P01624 115 aa16.09■□□□□ 0.17
PRPF40B-216ENST00000552301 IGLV1-44P01699 117 aa16.09■□□□□ 0.17
PRPF40B-216ENST00000552301 SLC6A6P31641 620 aa16.09■□□□□ 0.17
PRPF40B-216ENST00000552301 PTDSS1P48651 473 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms