RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 ATAD3BQ5T9A4 648 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 C1orf140Q5VVS0 124 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 CARD17Q5XLA6 110 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 TNFAIP8L2Q6P589 184 aaPredicted RBP4.52□□□□□ -1.69
HOXB3-213ENST00000552000 ZNF813Q6ZN06 617 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 FRMD7Q6ZUT3 714 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 CMIPQ8IY22 773 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 PARP8Q8N3A8 854 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 KRTCAP2Q8N6L1 136 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 ICA1LQ8NDH6 482 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 SYNPRQ8TBG9 265 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 XAGE5Q8WWM1 108 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 ROPN1LQ96C74 230 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 SLC25A36Q96CQ1 311 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 ELMOD3Q96FG2 381 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 ZNF75AQ96N20 296 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 PRPF18Q99633 342 aaKnown RBP4.52□□□□□ -1.69
HOXB3-213ENST00000552000 SLC30A2Q9BRI3 323 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 RSPO3Q9BXY4 272 aaPredicted RBP4.52□□□□□ -1.69
HOXB3-213ENST00000552000 CHIAQ9BZP6 476 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 OR51I1Q9H343 314 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 SLC6A13Q9NSD5 602 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 NKIRAS2Q9NYR9 191 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 SLC7A8Q9UHI5 535 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 RCE1Q9Y256 329 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 INSIG2Q9Y5U4 225 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 IGLV3-9A0A075B6K5 115 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 TRAV40A0A0B4J280 105 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 LOC100653049A0A140TA62 436 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 SLC22A23A1A5C7 686 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 ANKRD34BA5PLL1 514 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 AGAP5A6NIR3 686 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 A8MVM7 634 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 SRRM5B3KS81 715 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 TMEM114B3SHH9 223 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 AZIN1O14977 448 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 LSM1O15116 133 aaKnown RBP4.51□□□□□ -1.69
HOXB3-213ENST00000552000 AKAP8O43823 692 aaKnown RBP4.51□□□□□ -1.69
HOXB3-213ENST00000552000 ERLIN1O75477 346 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 KRT34O76011 436 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 AHSA1O95433 338 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 LCKP06239 509 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 CSF1P09603 554 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 SBK2P0C263 348 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 PATE4P0C8F1 98 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 GKN3PP0CG01 181 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 MYL2P10916 166 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 ZNF250P15622 560 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 CD80P33681 288 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 RPL3P39023 403 aaKnown RBP4.51□□□□□ -1.69
HOXB3-213ENST00000552000 MAP2K6P52564 334 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 LOXL3P58215 753 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 SEC61A1P61619 476 aaKnown RBP4.51□□□□□ -1.69
HOXB3-213ENST00000552000 GNG11P61952 73 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 RAB1AP62820 205 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 HPCAP84074 193 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 PAX8Q06710 450 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 SLC3A1Q07837 685 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 EPS8Q12929 822 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 PTGR1Q14914 329 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 MFSD13AQ14CX5 517 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 CHI3L2Q15782 390 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 GPAT3Q53EU6 434 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 AP1ARQ63HQ0 302 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 C11orf87Q6NUJ2 197 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 LRFN4Q6PJG9 635 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 ZYG11AQ6WRX3 759 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 BRD3OSQ6XYD6 125 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 C9orf139Q6ZV77 190 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 CLECL1Q8IZS7 167 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 CADM2Q8N3J6 435 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 PAQR4Q8N4S7 273 aaPredicted RBP4.51□□□□□ -1.69
HOXB3-213ENST00000552000 PIK3C3Q8NEB9 887 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 SPATA4Q8NEY3 305 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 LINC01006Q8NI28 216 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 FGFBP3Q8TAT2 258 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 OIT3Q8WWZ8 545 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 COQ8BQ96D53 544 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 OR2M2Q96R28 347 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 DCLRE1CQ96SD1 692 aaKnown RBP4.51□□□□□ -1.69
HOXB3-213ENST00000552000 NAPGQ99747 312 aaPredicted RBP4.51□□□□□ -1.69
HOXB3-213ENST00000552000 FUT8Q9BYC5 575 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 RAB17Q9H0T7 212 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 TUBB1Q9H4B7 451 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 POLE3Q9NRF9 147 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 ATAD3AQ9NVI7 634 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 DCAF16Q9NXF7 216 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 SLCO1C1Q9NYB5 712 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 ZNF224Q9NZL3 707 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 B3GAT1Q9P2W7 334 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 ASH2LQ9UBL3 628 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 POFUT2Q9Y2G5 429 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 TMED5Q9Y3A6 229 aa4.51□□□□□ -1.69
HOXB3-213ENST00000552000 TMEM233B4DJY2 109 aa4.5□□□□□ -1.69
HOXB3-213ENST00000552000 G3V2L1 256 aa4.5□□□□□ -1.69
HOXB3-213ENST00000552000 H3BQF6 201 aa4.5□□□□□ -1.69
HOXB3-213ENST00000552000 FAAHO00519 579 aa4.5□□□□□ -1.69
HOXB3-213ENST00000552000 ZSCAN12O43309 604 aa4.5□□□□□ -1.69
HOXB3-213ENST00000552000 SPRY3O43610 288 aa4.5□□□□□ -1.69
HOXB3-213ENST00000552000 NPIPB7O75200 414 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms