RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 VDAC3Q9Y277 283 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 LRCH1Q9Y2L9 728 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 CMAHPQ9Y471 501 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 FLVCR1Q9Y5Y0 555 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 USH1CQ9Y6N9 552 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 DNAH1Q9P2D7 4330 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 DMBT1Q9UGM3 2413 aaPredicted RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 TRAV40A0A0B4J280 105 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 IGHV2-70DA0A0C4DH43 119 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 ZNF816-ZNF321PA0A0X1KG74 233 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 KIR2DS1A0A191URI9 304 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 A0A1B0GU03 582 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 MACROD2A1Z1Q3 448 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 OR6C65A6NJZ3 312 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 C17orf100A8MU93 164 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 E7EVH7 732 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 J3KTA2 159 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 CLGNO14967 610 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 TM9SF1O15321 606 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 SPRY3O43610 288 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 COQ9O75208 318 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 GUCY1B2O75343 617 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 MRPL33O75394 65 aaKnown RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 SKAP2O75563 359 aaPredicted RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 STK16O75716 305 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 NKX2-2O95096 273 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 UTS2O95399 124 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 H6PDO95479 791 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 PMS2P2O95744 297 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 OXSR1O95747 527 aaPredicted RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 HSPA4LO95757 839 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 IGHV3-9P01782 118 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 GBAP04062 536 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 GYPCP04921 128 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 CD55P08174 381 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 MMP9P14780 707 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 ZNF250P15622 560 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 IGLL1P15814 213 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 FKBP2P26885 142 aaKnown RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 SFTPDP35247 375 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 FEN1P39748 380 aaKnown RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 GSTM5P46439 218 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 CLK1P49759 484 aaKnown RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 RAP1GDS1P52306 607 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 TRA2BP62995 288 aaKnown RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 CSNK2A1P68400 391 aaPredicted RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 SLC35A2P78381 396 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 GALK2Q01415 458 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 ROR2Q01974 943 aaKnown RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 IRF8Q02556 426 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 SLC18A2Q05940 514 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 SLC3A1Q07837 685 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 ILF2Q12905 390 aaKnown RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 FOXF1Q12946 379 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 STX5Q13190 355 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 CHIT1Q13231 466 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 SNTB2Q13425 540 aaKnown RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 SLC17A1Q14916 467 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 CD226Q15762 336 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 DECR1Q16698 335 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 HIST2H2ACQ16777 129 aaPredicted RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 TMEM176BQ3YBM2 270 aaPredicted RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 HIKESHIQ53FT3 197 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 GLE1Q53GS7 698 aaKnown RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 DEFB121Q5J5C9 76 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 TSPO2Q5TGU0 170 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 HIST2H2AA3Q6FI13 130 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 WBP2NLQ6ICG8 309 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 SULT1C3Q6IMI6 304 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 METTL2BQ6P1Q9 378 aaKnown RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 METAP1DQ6UB28 335 aaPredicted RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 LRIG3Q6UXM1 1119 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 TMPPEQ6ZT21 453 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 SATL1Q86VE3 508 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 LRRC28Q86X40 367 aaPredicted RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 SLC44A2Q8IWA5 706 aaPredicted RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 HSCBQ8IWL3 235 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 TXLNBQ8N3L3 684 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 OTUD6BQ8N6M0 293 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 TMEM217Q8N7C4 229 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 ZIC4Q8N9L1 334 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 L3MBTL4Q8NA19 623 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 SPERTQ8NA61 448 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 NOA1Q8NC60 698 aaKnown RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 OR7G2Q8NG99 324 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 OR52E4Q8NGH9 312 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 OR10S1Q8NGN2 331 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 OR1K1Q8NGR3 316 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 PIGXQ8TBF5 258 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 ST7LQ8TDW4 575 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 MAIP1Q8WWC4 291 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 ST8SIA1Q92185 356 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 BCL2L2Q92843 193 aaPredicted RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 TIMD4Q96H15 378 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 GAL3ST1Q99999 423 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 LMF2Q9BU23 707 aaKnown RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 C1QTNF6Q9BXI9 259 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 TBL1XR1Q9BZK7 514 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 LINC00470Q9BZP3 86 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 DERL2Q9GZP9 239 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms