RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 SHISA9B4DS77 424 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 ZNF879B4DU55 563 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 SRPX2O60687 465 aaPredicted RBP4.19□□□□□ -1.74
CPSF6-206ENST00000550987 GALR3O60755 368 aaPredicted RBP4.19□□□□□ -1.74
CPSF6-206ENST00000550987 SH3BGRLO75368 114 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 LGALS2P05162 132 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 SLC2A3P11169 496 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 RNH1P13489 461 aaKnown RBP4.19□□□□□ -1.74
CPSF6-206ENST00000550987 POU2F1P14859 743 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 GCAP28676 217 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 CD52P31358 61 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 BMI1P35226 326 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 NOVP48745 357 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 FNTAP49354 379 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 CASP4P49662 377 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 CDH4P55283 916 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 MGAT3Q09327 533 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 CUL1Q13616 776 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 PDZK1Q5T2W1 519 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 PRAMEF5Q5TYX0 476 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 PRAMEF6Q5VXH4 476 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 SLC25A42Q86VD7 318 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 HIPK1Q86Z02 1210 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 PSTKQ8IV42 348 aaKnown RBP4.19□□□□□ -1.74
CPSF6-206ENST00000550987 OR9K2Q8NGE7 335 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 LILRB4Q8NHJ6 448 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 ITLN1Q8WWA0 313 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 CDKL2Q92772 493 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 TMEM80Q96HE8 168 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 PPP1R16AQ96I34 528 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 MCCC1Q96RQ3 725 aaPredicted RBP4.19□□□□□ -1.74
CPSF6-206ENST00000550987 BCL7BQ9BQE9 202 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 ELOVL4Q9GZR5 314 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 NSRP1Q9H0G5 558 aaKnown RBP4.19□□□□□ -1.74
CPSF6-206ENST00000550987 ZBP1Q9H171 429 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 OPN3Q9H1Y3 402 aaPredicted RBP4.19□□□□□ -1.74
CPSF6-206ENST00000550987 VCX3BQ9H321 246 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 PPDPFQ9H3Y8 114 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 IKZF5Q9H5V7 419 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 CUTCQ9NTM9 273 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 MTRF1LQ9UGC7 380 aaKnown RBP4.19□□□□□ -1.74
CPSF6-206ENST00000550987 ADAM28Q9UKQ2 775 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 PPIAL4AQ9Y536 164 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 TIMM10BQ9Y5J6 103 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 COMMD3-BMI1R4GMX3 469 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 PKDREJQ9NTG1 2253 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 IGHV2-70DA0A0C4DH43 119 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 GOLGA8OA6NCC3 632 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 BTBD17A6NE02 478 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 EPM2AB3EWF7 344 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 HSBP1L1C9JCN9 74 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 E7ESA3 106 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 GOLGA8NF8WBI6 632 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 GPAA1O43292 621 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 MED7O43513 233 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 ECI2O75521 394 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 RHBDL1O75783 438 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 HPP00738 406 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 PIGRP01833 764 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 IGHG3P01860 377 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 KRT14P02533 472 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 IVLP07476 585 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 MELTFP08582 738 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 GOLGA8HP0CJ92 632 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 POLR2EP19388 210 aaKnown RBP4.18□□□□□ -1.74
CPSF6-206ENST00000550987 MMP11P24347 488 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 ANXA13P27216 316 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 GNA11P29992 359 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 OR1D4P47884 311 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 ALDH3B2P48448 385 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 PRRX1P54821 245 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 SEC61GP60059 68 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 BST1Q10588 318 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 PLD1Q13393 1074 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 LTB4RQ15722 352 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 TRIM16LQ309B1 348 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 SLC25A52Q3SY17 297 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 SFT2D3Q587I9 215 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 CEP85LQ5SZL2 805 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 PAQR6Q6TCH4 344 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 METTL7BQ6UX53 244 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 FAM228AQ86W67 206 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 OR5L2Q8NGL0 311 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 OR6T1Q8NGN1 323 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 OR9A4Q8NGU2 314 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 VN1R17PQ8TDU5 208 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 ADAMTS16Q8TE57 1224 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 TCTEX1D2Q8WW35 142 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 DNAJB3Q8WWF6 145 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 RASL10AQ92737 203 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 FGF13Q92913 245 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 C10orf35Q96D05 121 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 MSANTD3Q96H12 275 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 SLC38A2Q96QD8 506 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 NPY6RQ99463 290 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 VGLL1Q99990 258 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 UQCC2Q9BRT2 126 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 TM2D1Q9BX74 207 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 SPZ1Q9BXG8 430 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 ROPN1BQ9BZX4 212 aaPredicted RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms