RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 A0A1W2PPZ6 126 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 A6NNC1 897 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 ZNF99A8MXY4 864 aaPredicted RBP14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 XKRYO14609 159 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 ARHGEF9O43307 516 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 DHHO43323 396 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 SEC14L2O76054 403 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 NR2C1P13056 603 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 ANXA8P13928 327 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 HIST3H3Q16695 136 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 TBRG1Q3YBR2 411 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 HIKESHIQ53FT3 197 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 FBXW10Q5XX13 1052 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 RPL13AP3Q6NVV1 102 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 ZFP1Q6P2D0 407 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 ANKRD16Q6P6B7 361 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 SHQ1Q6PI26 577 aaKnown RBP14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 KLHL24Q6TFL4 600 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 SSX8Q7RTT4 187 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 FAM122BQ7Z309 247 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 WDR31Q8NA23 367 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 OR52L1Q8NGH7 329 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 OR5K1Q8NHB7 308 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 MAGEE2Q8TD90 523 aaPredicted RBP14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 MCHR2Q969V1 340 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 NRBF2Q96F24 287 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 ERMAPQ96PL5 475 aaPredicted RBP14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 RBP7Q96R05 134 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 NIPSNAP1Q9BPW8 284 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 ALG12Q9BV10 488 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 EGLN3Q9H6Z9 239 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 ZNF556Q9HAH1 456 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 NGBQ9NPG2 151 aa14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 MAGED1Q9Y5V3 778 aaPredicted RBP14.23□□□□□ -0.13
CHMP1A-209ENST00000550872 TEX13CA0A0J9YWL9 993 aa14.22□□□□□ -0.13
CHMP1A-209ENST00000550872 SOCS2O14508 198 aa14.22□□□□□ -0.13
CHMP1A-209ENST00000550872 APEHP13798 732 aaKnown RBP14.22□□□□□ -0.13
CHMP1A-209ENST00000550872 PRF1P14222 555 aa14.22□□□□□ -0.13
CHMP1A-209ENST00000550872 SDHAP31040 664 aa14.22□□□□□ -0.13
CHMP1A-209ENST00000550872 ZNF84P51523 738 aa14.22□□□□□ -0.13
CHMP1A-209ENST00000550872 UBE2NP61088 152 aaKnown RBP14.22□□□□□ -0.13
CHMP1A-209ENST00000550872 COX10Q12887 443 aa14.22□□□□□ -0.13
CHMP1A-209ENST00000550872 KRR1Q13601 381 aaKnown RBP14.22□□□□□ -0.13
CHMP1A-209ENST00000550872 CLEC12AQ5QGZ9 265 aa14.22□□□□□ -0.13
CHMP1A-209ENST00000550872 CD300LDQ6UXZ3 194 aa14.22□□□□□ -0.13
CHMP1A-209ENST00000550872 ZNF813Q6ZN06 617 aa14.22□□□□□ -0.13
CHMP1A-209ENST00000550872 ATG16L2Q8NAA4 619 aa14.22□□□□□ -0.13
CHMP1A-209ENST00000550872 FNDC8Q8TC99 324 aa14.22□□□□□ -0.13
CHMP1A-209ENST00000550872 RASD2Q96D21 266 aa14.22□□□□□ -0.13
CHMP1A-209ENST00000550872 BOD1Q96IK1 185 aa14.22□□□□□ -0.13
CHMP1A-209ENST00000550872 FOXB1Q99853 325 aa14.22□□□□□ -0.13
CHMP1A-209ENST00000550872 SEMA6AQ9H2E6 1030 aa14.22□□□□□ -0.13
CHMP1A-209ENST00000550872 IL20Q9NYY1 176 aa14.22□□□□□ -0.13
CHMP1A-209ENST00000550872 AMDHD2Q9Y303 409 aa14.22□□□□□ -0.13
CHMP1A-209ENST00000550872 SLC25A15Q9Y619 301 aa14.22□□□□□ -0.13
CHMP1A-209ENST00000550872 CSMD1Q96PZ7 3565 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 ERICH4A6NGS2 130 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 ANKRD65E5RJM6 399 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 H7C1C5 153 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 IMPA2O14732 288 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 ARPC3O15145 178 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 ENTPD5O75356 428 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 SOX14O95416 240 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 SLC2A10O95528 541 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 TXNDC12O95881 172 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 WNT11O96014 354 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 IGFBP1P08833 259 aaPredicted RBP14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 HOXB1P14653 301 aaPredicted RBP14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 ZNF23P17027 643 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 NOS3P29474 1203 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 LCN6P62502 163 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 FMODQ06828 376 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 MESTQ5EB52 335 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 BEX5Q5H9J7 111 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 THEM4Q5T1C6 240 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 KLHL17Q6TDP4 642 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 TMEM200AQ86VY9 491 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 HIPK1Q86Z02 1210 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 CLDN22Q8N7P3 220 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 NSMAFQ92636 917 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 NMD3Q96D46 503 aaKnown RBP14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 PIK3IP1Q96FE7 263 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 CENPNQ96H22 339 aaPredicted RBP14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 TSSK6Q9BXA6 273 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 C1QTNF6Q9BXI9 259 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 PLA2G12AQ9BZM1 189 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 NELFAQ9H3P2 528 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 OBP2BQ9NPH6 170 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 TBC1D23Q9NUY8 699 aa14.21□□□□□ -0.13
CHMP1A-209ENST00000550872 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 SLC22A23A1A5C7 686 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 PRSS37A4D1T9 235 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 DEFB108AA8MXU0 73 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 G3V2T6 193 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 H3BNX3 289 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 SIAH2O43255 324 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 IDH3BO43837 385 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 AHCYL1O43865 530 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 CTAG2O75638 210 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 GOSR1O95249 250 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms