RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 CACNG6Q9BXT2 260 aa14.98□□□□□ -0.01
CHMP1A-208ENST00000550102 NDEL1Q9GZM8 345 aa14.98□□□□□ -0.01
CHMP1A-208ENST00000550102 TXNIPQ9H3M7 391 aa14.98□□□□□ -0.01
CHMP1A-208ENST00000550102 SEC61A2Q9H9S3 476 aa14.98□□□□□ -0.01
CHMP1A-208ENST00000550102 BARX1Q9HBU1 254 aaPredicted RBP14.98□□□□□ -0.01
CHMP1A-208ENST00000550102 NIPBLQ6KC79 2804 aaeCLIP14.98□□□□□ -0.01
CHMP1A-208ENST00000550102 TRAV27A0A087WT01 109 aa14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 UBL3O95164 117 aa14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 IGHMP01871 453 aa14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 QDPRP09417 244 aa14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 ITGA2P17301 1181 aa14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 APOBEC3AP31941 199 aaPredicted RBP14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 GPR4P46093 362 aa14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 ZNF84P51523 738 aa14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 CHRNB3Q05901 458 aa14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 RUNX1T1Q06455 604 aa14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 LAPTM4AQ15012 233 aa14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 HIST3H3Q16695 136 aa14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 ARMC4Q5T2S8 1044 aa14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 FAM205BPQ63HN1 556 aa14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 LRFN4Q6PJG9 635 aa14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 MEX3DQ86XN8 651 aaKnown RBP14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 SLC22A24Q8N4F4 322 aa14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 SYT14Q8NB59 555 aa14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 OR4F15Q8NGB8 312 aa14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 SLC7A13Q8TCU3 470 aa14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 COX4I2Q96KJ9 171 aa14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 C7orf34Q96L11 122 aa14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 ZNF347Q96SE7 839 aa14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 MRPL13Q9BYD1 178 aaKnown RBP14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 DENND2DQ9H6A0 471 aaPredicted RBP14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 NOX3Q9HBY0 568 aa14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 CA10Q9NS85 328 aa14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 TMEM38BQ9NVV0 291 aa14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 B3GNT2Q9NY97 397 aa14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 FBXL3Q9UKT7 428 aa14.97□□□□□ -0.01
CHMP1A-208ENST00000550102 IGHV2OR16-5A0A0B4J2B6 119 aa14.96□□□□□ -0.01
CHMP1A-208ENST00000550102 TRIM64A6NGJ6 449 aa14.96□□□□□ -0.01
CHMP1A-208ENST00000550102 TRIM64BA6NI03 449 aa14.96□□□□□ -0.01
CHMP1A-208ENST00000550102 H7C1Q1 480 aa14.96□□□□□ -0.01
CHMP1A-208ENST00000550102 TRMUO75648 421 aaKnown RBP14.96□□□□□ -0.01
CHMP1A-208ENST00000550102 FARS2O95363 451 aaKnown RBP14.96□□□□□ -0.01
CHMP1A-208ENST00000550102 RAB36O95755 333 aa14.96□□□□□ -0.01
CHMP1A-208ENST00000550102 IGHV4-39P01824 125 aa14.96□□□□□ -0.01
CHMP1A-208ENST00000550102 SEMG1P04279 462 aa14.96□□□□□ -0.01
CHMP1A-208ENST00000550102 INHBBP09529 407 aa14.96□□□□□ -0.01
CHMP1A-208ENST00000550102 OR8G3PP0DMU2 310 aa14.96□□□□□ -0.01
CHMP1A-208ENST00000550102 BMP4P12644 408 aa14.96□□□□□ -0.01
CHMP1A-208ENST00000550102 CALCRP30988 508 aa14.96□□□□□ -0.01
CHMP1A-208ENST00000550102 MSX2P35548 267 aaPredicted RBP14.96□□□□□ -0.01
CHMP1A-208ENST00000550102 CD47Q08722 323 aa14.96□□□□□ -0.01
CHMP1A-208ENST00000550102 PODNL1Q6PEZ8 512 aa14.96□□□□□ -0.01
CHMP1A-208ENST00000550102 TBPL2Q6SJ96 375 aa14.96□□□□□ -0.01
CHMP1A-208ENST00000550102 TMPRSS11FQ6ZWK6 438 aa14.96□□□□□ -0.01
CHMP1A-208ENST00000550102 BIVMQ86UB2 503 aa14.96□□□□□ -0.01
CHMP1A-208ENST00000550102 IL17RDQ8NFM7 739 aa14.96□□□□□ -0.01
CHMP1A-208ENST00000550102 OR51A7Q8NH64 312 aa14.96□□□□□ -0.01
CHMP1A-208ENST00000550102 MCHR2Q969V1 340 aa14.96□□□□□ -0.01
CHMP1A-208ENST00000550102 PYURFQ96I23 114 aa14.96□□□□□ -0.01
CHMP1A-208ENST00000550102 DHRS1Q96LJ7 313 aa14.96□□□□□ -0.01
CHMP1A-208ENST00000550102 SMURF2Q9HAU4 748 aa14.96□□□□□ -0.01
CHMP1A-208ENST00000550102 KRCC1Q9NPI7 259 aaPredicted RBP14.96□□□□□ -0.01
CHMP1A-208ENST00000550102 ZNF224Q9NZL3 707 aa14.96□□□□□ -0.01
CHMP1A-208ENST00000550102 A6NIZ1 184 aa14.95□□□□□ -0.02
CHMP1A-208ENST00000550102 B2RBV5 119 aa14.95□□□□□ -0.02
CHMP1A-208ENST00000550102 H7C417 338 aa14.95□□□□□ -0.02
CHMP1A-208ENST00000550102 PDE5AO76074 875 aa14.95□□□□□ -0.02
CHMP1A-208ENST00000550102 ZNF14P17017 642 aaPredicted RBP14.95□□□□□ -0.02
CHMP1A-208ENST00000550102 CALB2P22676 271 aa14.95□□□□□ -0.02
CHMP1A-208ENST00000550102 PTDSS1P48651 473 aaKnown RBP14.95□□□□□ -0.02
CHMP1A-208ENST00000550102 ZNF133P52736 654 aaPredicted RBP14.95□□□□□ -0.02
CHMP1A-208ENST00000550102 CTXN1P60606 82 aa14.95□□□□□ -0.02
CHMP1A-208ENST00000550102 RAP1BP61224 184 aa14.95□□□□□ -0.02
CHMP1A-208ENST00000550102 RPL27P61353 136 aaKnown RBP14.95□□□□□ -0.02
CHMP1A-208ENST00000550102 RAP1AP62834 184 aa14.95□□□□□ -0.02
CHMP1A-208ENST00000550102 MYBPC1Q00872 1141 aa14.95□□□□□ -0.02
CHMP1A-208ENST00000550102 PIGFQ07326 219 aa14.95□□□□□ -0.02
CHMP1A-208ENST00000550102 NRN1LQ496H8 165 aa14.95□□□□□ -0.02
CHMP1A-208ENST00000550102 C10orf128Q5T292 105 aa14.95□□□□□ -0.02
CHMP1A-208ENST00000550102 DPPA2Q7Z7J5 298 aa14.95□□□□□ -0.02
CHMP1A-208ENST00000550102 IGFN1Q86VF2 1251 aa14.95□□□□□ -0.02
CHMP1A-208ENST00000550102 ARHGAP24Q8N264 748 aa14.95□□□□□ -0.02
CHMP1A-208ENST00000550102 NUP37Q8NFH4 326 aa14.95□□□□□ -0.02
CHMP1A-208ENST00000550102 OR4K5Q8NGD3 323 aa14.95□□□□□ -0.02
CHMP1A-208ENST00000550102 MCUR1Q96AQ8 359 aa14.95□□□□□ -0.02
CHMP1A-208ENST00000550102 FAM46AQ96IP4 442 aaKnown RBP14.95□□□□□ -0.02
CHMP1A-208ENST00000550102 NSL1Q96IY1 281 aa14.95□□□□□ -0.02
CHMP1A-208ENST00000550102 ALG12Q9BV10 488 aa14.95□□□□□ -0.02
CHMP1A-208ENST00000550102 FAM53CQ9NYF3 392 aa14.95□□□□□ -0.02
CHMP1A-208ENST00000550102 GDF2Q9UK05 429 aaPredicted RBP14.95□□□□□ -0.02
CHMP1A-208ENST00000550102 CR1P17927 2039 aa14.95□□□□□ -0.02
CHMP1A-208ENST00000550102 TRBV4-1A0A0J9YWV2 114 aa14.94□□□□□ -0.02
CHMP1A-208ENST00000550102 CDC42EP2O14613 210 aa14.94□□□□□ -0.02
CHMP1A-208ENST00000550102 NDUFS7O75251 213 aa14.94□□□□□ -0.02
CHMP1A-208ENST00000550102 DIRAS1O95057 198 aa14.94□□□□□ -0.02
CHMP1A-208ENST00000550102 GIPRP48546 466 aa14.94□□□□□ -0.02
CHMP1A-208ENST00000550102 SMIM11AP58511 58 aa14.94□□□□□ -0.02
CHMP1A-208ENST00000550102 SNRPD2P62316 118 aaKnown RBP14.94□□□□□ -0.02
CHMP1A-208ENST00000550102 RAB1AP62820 205 aa14.94□□□□□ -0.02
CHMP1A-208ENST00000550102 SPIBQ01892 262 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms