RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 ZNF229Q9UJW7 825 aa13.7□□□□□ -0.22
COX6A1-203ENST00000550009 FKBP7Q9Y680 259 aa13.7□□□□□ -0.22
COX6A1-203ENST00000550009 DHHO43323 396 aa13.69□□□□□ -0.22
COX6A1-203ENST00000550009 TRMUO75648 421 aaKnown RBP13.69□□□□□ -0.22
COX6A1-203ENST00000550009 SLC2A10O95528 541 aa13.69□□□□□ -0.22
COX6A1-203ENST00000550009 CLPTM1O96005 669 aa13.69□□□□□ -0.22
COX6A1-203ENST00000550009 MT-ND1P03886 318 aa13.69□□□□□ -0.22
COX6A1-203ENST00000550009 TROVE2P10155 538 aaKnown RBP eCLIP13.69□□□□□ -0.22
COX6A1-203ENST00000550009 DAOP14920 347 aa13.69□□□□□ -0.22
COX6A1-203ENST00000550009 FMODQ06828 376 aa13.69□□□□□ -0.22
COX6A1-203ENST00000550009 FXNQ16595 210 aa13.69□□□□□ -0.22
COX6A1-203ENST00000550009 TMEM255AQ5JRV8 349 aa13.69□□□□□ -0.22
COX6A1-203ENST00000550009 INTS11Q5TA45 600 aaKnown RBP13.69□□□□□ -0.22
COX6A1-203ENST00000550009 CYB5R2Q6BCY4 276 aa13.69□□□□□ -0.22
COX6A1-203ENST00000550009 NANOGNBQ7Z5D8 188 aa13.69□□□□□ -0.22
COX6A1-203ENST00000550009 IGFN1Q86VF2 1251 aa13.69□□□□□ -0.22
COX6A1-203ENST00000550009 TREML1Q86YW5 311 aa13.69□□□□□ -0.22
COX6A1-203ENST00000550009 MICU2Q8IYU8 434 aa13.69□□□□□ -0.22
COX6A1-203ENST00000550009 RBM15BQ8NDT2 890 aaKnown RBP13.69□□□□□ -0.22
COX6A1-203ENST00000550009 OR4K5Q8NGD3 323 aa13.69□□□□□ -0.22
COX6A1-203ENST00000550009 ASB10Q8WXI3 467 aa13.69□□□□□ -0.22
COX6A1-203ENST00000550009 GTF3AQ92664 365 aaKnown RBP13.69□□□□□ -0.22
COX6A1-203ENST00000550009 MCHR2Q969V1 340 aa13.69□□□□□ -0.22
COX6A1-203ENST00000550009 ZNF566Q969W8 418 aa13.69□□□□□ -0.22
COX6A1-203ENST00000550009 SLC25A44Q96H78 314 aaPredicted RBP13.69□□□□□ -0.22
COX6A1-203ENST00000550009 PIMREGQ9BSJ6 248 aa13.69□□□□□ -0.22
COX6A1-203ENST00000550009 EVA1AQ9H8M9 152 aa13.69□□□□□ -0.22
COX6A1-203ENST00000550009 B3GAT2Q9NPZ5 323 aa13.69□□□□□ -0.22
COX6A1-203ENST00000550009 A4GNTQ9UNA3 340 aa13.69□□□□□ -0.22
COX6A1-203ENST00000550009 FAM220BPB1ANY3 271 aa13.68□□□□□ -0.22
COX6A1-203ENST00000550009 WNT9BO14905 357 aa13.68□□□□□ -0.22
COX6A1-203ENST00000550009 NCR1O76036 304 aa13.68□□□□□ -0.22
COX6A1-203ENST00000550009 CSF3P09919 207 aa13.68□□□□□ -0.22
COX6A1-203ENST00000550009 FAM157BP0CG42 384 aa13.68□□□□□ -0.22
COX6A1-203ENST00000550009 BMP4P12644 408 aa13.68□□□□□ -0.22
COX6A1-203ENST00000550009 MAKP20794 623 aa13.68□□□□□ -0.22
COX6A1-203ENST00000550009 COL8A2P25067 703 aa13.68□□□□□ -0.22
COX6A1-203ENST00000550009 KDELR2P33947 212 aa13.68□□□□□ -0.22
COX6A1-203ENST00000550009 CHRFAM7AQ494W8 412 aa13.68□□□□□ -0.22
COX6A1-203ENST00000550009 IQCCQ4KMZ1 466 aa13.68□□□□□ -0.22
COX6A1-203ENST00000550009 PHC2Q8IXK0 858 aa13.68□□□□□ -0.22
COX6A1-203ENST00000550009 LRRC18Q8N456 261 aa13.68□□□□□ -0.22
COX6A1-203ENST00000550009 TMEM239Q8WW34 195 aa13.68□□□□□ -0.22
COX6A1-203ENST00000550009 HDAC2Q92769 488 aaKnown RBP13.68□□□□□ -0.22
COX6A1-203ENST00000550009 MRPL24Q96A35 216 aaKnown RBP13.68□□□□□ -0.22
COX6A1-203ENST00000550009 SGTBQ96EQ0 304 aa13.68□□□□□ -0.22
COX6A1-203ENST00000550009 MPP4Q96JB8 637 aa13.68□□□□□ -0.22
COX6A1-203ENST00000550009 MRPL13Q9BYD1 178 aaKnown RBP13.68□□□□□ -0.22
COX6A1-203ENST00000550009 MAN2C1Q9NTJ4 1040 aa13.68□□□□□ -0.22
COX6A1-203ENST00000550009 LOC390937A0A1W2PQ73 354 aa13.67□□□□□ -0.22
COX6A1-203ENST00000550009 FFAR1O14842 300 aa13.67□□□□□ -0.22
COX6A1-203ENST00000550009 LILRA1O75019 489 aa13.67□□□□□ -0.22
COX6A1-203ENST00000550009 BCL10O95999 233 aa13.67□□□□□ -0.22
COX6A1-203ENST00000550009 HPXP02790 462 aa13.67□□□□□ -0.22
COX6A1-203ENST00000550009 HIST1H2ABP04908 130 aa13.67□□□□□ -0.22
COX6A1-203ENST00000550009 TSPAN19P0C672 248 aa13.67□□□□□ -0.22
COX6A1-203ENST00000550009 NAT2P11245 290 aa13.67□□□□□ -0.22
COX6A1-203ENST00000550009 APEHP13798 732 aaKnown RBP13.67□□□□□ -0.22
COX6A1-203ENST00000550009 TOP3AQ13472 1001 aaPredicted RBP13.67□□□□□ -0.22
COX6A1-203ENST00000550009 FHL1Q13642 323 aa13.67□□□□□ -0.22
COX6A1-203ENST00000550009 HIST3H3Q16695 136 aa13.67□□□□□ -0.22
COX6A1-203ENST00000550009 ELFN2Q5R3F8 820 aa13.67□□□□□ -0.22
COX6A1-203ENST00000550009 HIST3H2AQ7L7L0 130 aa13.67□□□□□ -0.22
COX6A1-203ENST00000550009 TSEN54Q7Z6J9 526 aaKnown RBP13.67□□□□□ -0.22
COX6A1-203ENST00000550009 SLC15A3Q8IY34 581 aa13.67□□□□□ -0.22
COX6A1-203ENST00000550009 HIST1H2ACQ93077 130 aa13.67□□□□□ -0.22
COX6A1-203ENST00000550009 YIPF5Q969M3 257 aa13.67□□□□□ -0.22
COX6A1-203ENST00000550009 RAB1BQ9H0U4 201 aa13.67□□□□□ -0.22
COX6A1-203ENST00000550009 DYNLRB1Q9NP97 96 aa13.67□□□□□ -0.22
COX6A1-203ENST00000550009 CMAHPQ9Y471 501 aa13.67□□□□□ -0.22
COX6A1-203ENST00000550009 UGT2A1Q9Y4X1 527 aa13.67□□□□□ -0.22
COX6A1-203ENST00000550009 CAPN7Q9Y6W3 813 aa13.67□□□□□ -0.22
COX6A1-203ENST00000550009 TANC2Q9HCD6 1990 aa13.67□□□□□ -0.22
COX6A1-203ENST00000550009 LOC100289279A0A1B0GTE1 492 aa13.66□□□□□ -0.22
COX6A1-203ENST00000550009 NME4O00746 187 aa13.66□□□□□ -0.22
COX6A1-203ENST00000550009 LMX1BO60663 402 aa13.66□□□□□ -0.22
COX6A1-203ENST00000550009 OR5F1O95221 314 aa13.66□□□□□ -0.22
COX6A1-203ENST00000550009 RAB36O95755 333 aa13.66□□□□□ -0.22
COX6A1-203ENST00000550009 SERPINA5P05154 406 aa13.66□□□□□ -0.22
COX6A1-203ENST00000550009 CLRN1P58418 232 aa13.66□□□□□ -0.22
COX6A1-203ENST00000550009 CCNIQ14094 377 aa13.66□□□□□ -0.22
COX6A1-203ENST00000550009 COQ5Q5HYK3 327 aa13.66□□□□□ -0.22
COX6A1-203ENST00000550009 ARMC4Q5T2S8 1044 aa13.66□□□□□ -0.22
COX6A1-203ENST00000550009 OTPQ5XKR4 325 aa13.66□□□□□ -0.22
COX6A1-203ENST00000550009 TBPL2Q6SJ96 375 aa13.66□□□□□ -0.22
COX6A1-203ENST00000550009 PIWIL3Q7Z3Z3 882 aaKnown RBP13.66□□□□□ -0.22
COX6A1-203ENST00000550009 CCDC36Q8IYA8 594 aa13.66□□□□□ -0.22
COX6A1-203ENST00000550009 CPEB3Q8NE35 698 aaKnown RBP13.66□□□□□ -0.22
COX6A1-203ENST00000550009 NOXO1Q8NFA2 376 aa13.66□□□□□ -0.22
COX6A1-203ENST00000550009 OR2T12Q8NG77 320 aa13.66□□□□□ -0.22
COX6A1-203ENST00000550009 NSMAFQ92636 917 aa13.66□□□□□ -0.22
COX6A1-203ENST00000550009 NMD3Q96D46 503 aaKnown RBP13.66□□□□□ -0.22
COX6A1-203ENST00000550009 SNX18Q96RF0 628 aa13.66□□□□□ -0.22
COX6A1-203ENST00000550009 SEPHS2Q99611 448 aa13.66□□□□□ -0.22
COX6A1-203ENST00000550009 SLC19A3Q9BZV2 496 aa13.66□□□□□ -0.22
COX6A1-203ENST00000550009 NARFLQ9H6Q4 476 aa13.66□□□□□ -0.22
COX6A1-203ENST00000550009 INIPQ9NRY2 104 aa13.66□□□□□ -0.22
COX6A1-203ENST00000550009 ANK2Q01484 3957 aa13.65□□□□□ -0.22
COX6A1-203ENST00000550009 TRAV27A0A087WT01 109 aa13.65□□□□□ -0.22
COX6A1-203ENST00000550009 ELOVL7A1L3X0 281 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms