RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 ARFIP2P53365 341 aa11.55□□□□□ -0.56
GCN1-206ENST00000549815 RPL18Q07020 188 aaKnown RBP11.55□□□□□ -0.56
GCN1-206ENST00000549815 PIN1Q13526 163 aaPredicted RBP11.55□□□□□ -0.56
GCN1-206ENST00000549815 IQCCQ4KMZ1 466 aa11.55□□□□□ -0.56
GCN1-206ENST00000549815 FAM166AQ6J272 317 aa11.55□□□□□ -0.56
GCN1-206ENST00000549815 NANOGNBQ7Z5D8 188 aa11.55□□□□□ -0.56
GCN1-206ENST00000549815 LRP11Q86VZ4 500 aa11.55□□□□□ -0.56
GCN1-206ENST00000549815 UBASH3BQ8TF42 649 aa11.55□□□□□ -0.56
GCN1-206ENST00000549815 TMEM255BQ8WV15 326 aa11.55□□□□□ -0.56
GCN1-206ENST00000549815 MCHR2Q969V1 340 aa11.55□□□□□ -0.56
GCN1-206ENST00000549815 SH3GL3Q99963 347 aa11.55□□□□□ -0.56
GCN1-206ENST00000549815 ECSITQ9BQ95 431 aa11.55□□□□□ -0.56
GCN1-206ENST00000549815 POLR2J2Q9GZM3 115 aaKnown RBP11.55□□□□□ -0.56
GCN1-206ENST00000549815 POLR2J3Q9H1A7 115 aaKnown RBP11.55□□□□□ -0.56
GCN1-206ENST00000549815 TPK1Q9H3S4 243 aa11.55□□□□□ -0.56
GCN1-206ENST00000549815 DYNLRB1Q9NP97 96 aa11.55□□□□□ -0.56
GCN1-206ENST00000549815 C20orf141Q9NUB4 165 aa11.55□□□□□ -0.56
GCN1-206ENST00000549815 MYEF2Q9P2K5 600 aaKnown RBP11.55□□□□□ -0.56
GCN1-206ENST00000549815 BAG5Q9UL15 447 aa11.55□□□□□ -0.56
GCN1-206ENST00000549815 KCNS2Q9ULS6 477 aa11.55□□□□□ -0.56
GCN1-206ENST00000549815 LRP5LA4QPB2 252 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 RNF212BA8MTL3 300 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 FAM220BPB1ANY3 271 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 CENPBD1B2RD01 187 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 LYNX1G3V0Z9 82 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 BLOC1S5-TXNDC5H3BN57 136 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 MRASO14807 208 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 PHF1O43189 567 aaPredicted RBP11.54□□□□□ -0.56
GCN1-206ENST00000549815 SYNGR3O43761 229 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 SHOX2O60902 331 aaPredicted RBP11.54□□□□□ -0.56
GCN1-206ENST00000549815 BCL10O95999 233 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 IGHG1P01857 330 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 HIST1H2ABP04908 130 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 F13BP05160 661 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 ERCC1P07992 297 aaPredicted RBP11.54□□□□□ -0.56
GCN1-206ENST00000549815 QDPRP09417 244 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 OR8G3PP0DMU2 310 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 LYNX1P0DP58 116 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 UMPSP11172 480 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 FUT1P19526 365 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 SEC24CP53992 1094 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 TRIP10Q15642 601 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 NRN1LQ496H8 165 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 ELFN2Q5R3F8 820 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 ERICH5Q6P6B1 374 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 DEF8Q6ZN54 512 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 HIST3H2AQ7L7L0 130 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 PAQR4Q8N4S7 273 aaPredicted RBP11.54□□□□□ -0.56
GCN1-206ENST00000549815 C10orf82Q8WW14 230 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 TMEM239Q8WW34 195 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 ASB10Q8WXI3 467 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 HIST1H2ACQ93077 130 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 C1orf159Q96HA4 380 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 ZNF347Q96SE7 839 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 SYT3Q9BQG1 590 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 SHARPINQ9H0F6 387 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 CHODLQ9H9P2 273 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 MRGBPQ9NV56 204 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 FGFR1OP2Q9NVK5 253 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 REV1Q9UBZ9 1251 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 SLC7A8Q9UHI5 535 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 RIMS3Q9UJD0 308 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 SPEF1Q9Y4P9 236 aa11.54□□□□□ -0.56
GCN1-206ENST00000549815 LOC100653049A0A140TA62 436 aa11.53□□□□□ -0.56
GCN1-206ENST00000549815 M0R233 179 aa11.53□□□□□ -0.56
GCN1-206ENST00000549815 TRMUO75648 421 aaKnown RBP11.53□□□□□ -0.56
GCN1-206ENST00000549815 KRT34O76011 436 aa11.53□□□□□ -0.56
GCN1-206ENST00000549815 HPXP02790 462 aa11.53□□□□□ -0.56
GCN1-206ENST00000549815 MMP7P09237 267 aaPredicted RBP11.53□□□□□ -0.56
GCN1-206ENST00000549815 TROVE2P10155 538 aaKnown RBP eCLIP11.53□□□□□ -0.56
GCN1-206ENST00000549815 THRBP10828 461 aa11.53□□□□□ -0.56
GCN1-206ENST00000549815 KDELR2P33947 212 aa11.53□□□□□ -0.56
GCN1-206ENST00000549815 AQP2P41181 271 aa11.53□□□□□ -0.56
GCN1-206ENST00000549815 ALDH3B1P43353 468 aa11.53□□□□□ -0.56
GCN1-206ENST00000549815 OR1E2P47887 323 aa11.53□□□□□ -0.56
GCN1-206ENST00000549815 CHN2P52757 468 aa11.53□□□□□ -0.56
GCN1-206ENST00000549815 TAS2R41P59536 307 aa11.53□□□□□ -0.56
GCN1-206ENST00000549815 RPS23P62266 143 aaKnown RBP11.53□□□□□ -0.56
GCN1-206ENST00000549815 SF3A3Q12874 501 aaKnown RBP eCLIP11.53□□□□□ -0.56
GCN1-206ENST00000549815 MAPRE2Q15555 327 aa11.53□□□□□ -0.56
GCN1-206ENST00000549815 MMEL1Q495T6 779 aa11.53□□□□□ -0.56
GCN1-206ENST00000549815 CYBRD1Q53TN4 286 aa11.53□□□□□ -0.56
GCN1-206ENST00000549815 FAM120AOSQ5T036 256 aa11.53□□□□□ -0.56
GCN1-206ENST00000549815 C10orf128Q5T292 105 aa11.53□□□□□ -0.56
GCN1-206ENST00000549815 ARMC4Q5T2S8 1044 aa11.53□□□□□ -0.56
GCN1-206ENST00000549815 IL17RELQ6ZVW7 336 aa11.53□□□□□ -0.56
GCN1-206ENST00000549815 NOXO1Q8NFA2 376 aa11.53□□□□□ -0.56
GCN1-206ENST00000549815 OR4K5Q8NGD3 323 aa11.53□□□□□ -0.56
GCN1-206ENST00000549815 MOSPD2Q8NHP6 518 aa11.53□□□□□ -0.56
GCN1-206ENST00000549815 HPS1Q92902 700 aa11.53□□□□□ -0.56
GCN1-206ENST00000549815 NMD3Q96D46 503 aaKnown RBP11.53□□□□□ -0.56
GCN1-206ENST00000549815 SGTBQ96EQ0 304 aa11.53□□□□□ -0.56
GCN1-206ENST00000549815 MS4A5Q9H3V2 200 aa11.53□□□□□ -0.56
GCN1-206ENST00000549815 IGKV1D-43A0A0B4J1Z2 117 aa11.52□□□□□ -0.57
GCN1-206ENST00000549815 NPIPB13A6NJU9 1138 aa11.52□□□□□ -0.57
GCN1-206ENST00000549815 NPIPB4C9JG80 1138 aa11.52□□□□□ -0.57
GCN1-206ENST00000549815 ENTPD5O75356 428 aa11.52□□□□□ -0.57
GCN1-206ENST00000549815 FARS2O95363 451 aaKnown RBP11.52□□□□□ -0.57
GCN1-206ENST00000549815 TGFAP01135 160 aa11.52□□□□□ -0.57
GCN1-206ENST00000549815 ACADSP16219 412 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms