RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 YTHDF1Q9BYJ9 559 aaKnown RBP25.5■■□□□ 1.67
BRF1-213ENST00000548421 NUAK2Q9H093 628 aa25.5■■□□□ 1.67
BRF1-213ENST00000548421 PLCXD1Q9NUJ7 323 aa25.5■■□□□ 1.67
BRF1-213ENST00000548421 FKBP7Q9Y680 259 aa25.5■■□□□ 1.67
BRF1-213ENST00000548421 SMNDC1O75940 238 aaKnown RBP eCLIP25.49■■□□□ 1.67
BRF1-213ENST00000548421 CRABP1P29762 137 aa25.49■■□□□ 1.67
BRF1-213ENST00000548421 HTR1FP30939 366 aa25.49■■□□□ 1.67
BRF1-213ENST00000548421 DNM1P34Q6PK57 102 aa25.49■■□□□ 1.67
BRF1-213ENST00000548421 B3GNT6Q6ZMB0 384 aa25.49■■□□□ 1.67
BRF1-213ENST00000548421 ZBTB46Q86UZ6 589 aa25.49■■□□□ 1.67
BRF1-213ENST00000548421 OR6N1Q8NGY5 312 aa25.49■■□□□ 1.67
BRF1-213ENST00000548421 TMEM54Q969K7 222 aa25.49■■□□□ 1.67
BRF1-213ENST00000548421 SRA1Q9HD15 236 aaKnown RBP25.49■■□□□ 1.67
BRF1-213ENST00000548421 AMBNQ9NP70 447 aa25.49■■□□□ 1.67
BRF1-213ENST00000548421 FOXD3Q9UJU5 478 aaPredicted RBP25.49■■□□□ 1.67
BRF1-213ENST00000548421 BLOC1S6Q9UL45 172 aa25.49■■□□□ 1.67
BRF1-213ENST00000548421 MYRFQ9Y2G1 1151 aa25.49■■□□□ 1.67
BRF1-213ENST00000548421 RPL36Q9Y3U8 105 aaKnown RBP25.49■■□□□ 1.67
BRF1-213ENST00000548421 SLC22A31A6NKX4 558 aa25.48■■□□□ 1.67
BRF1-213ENST00000548421 DCTN6O00399 190 aa25.48■■□□□ 1.67
BRF1-213ENST00000548421 XPNPEP2O43895 674 aa25.48■■□□□ 1.67
BRF1-213ENST00000548421 SLC16A7O60669 478 aa25.48■■□□□ 1.67
BRF1-213ENST00000548421 FAM20BO75063 409 aa25.48■■□□□ 1.67
BRF1-213ENST00000548421 RPS7P62081 194 aaKnown RBP25.48■■□□□ 1.67
BRF1-213ENST00000548421 FMODQ06828 376 aa25.48■■□□□ 1.67
BRF1-213ENST00000548421 DBPQ10586 325 aaPredicted RBP25.48■■□□□ 1.67
BRF1-213ENST00000548421 SLC35D3Q5M8T2 416 aa25.48■■□□□ 1.67
BRF1-213ENST00000548421 SEM1Q6ZVN7 128 aa25.48■■□□□ 1.67
BRF1-213ENST00000548421 C20orf196Q8IYI0 205 aa25.48■■□□□ 1.67
BRF1-213ENST00000548421 PROKR2Q8NFJ6 384 aa25.48■■□□□ 1.67
BRF1-213ENST00000548421 NMD3Q96D46 503 aaKnown RBP25.48■■□□□ 1.67
BRF1-213ENST00000548421 SCN3BQ9NY72 215 aa25.48■■□□□ 1.67
BRF1-213ENST00000548421 GLTPQ9NZD2 209 aa25.48■■□□□ 1.67
BRF1-213ENST00000548421 PHF3Q92576 2039 aaKnown RBP25.48■■□□□ 1.67
BRF1-213ENST00000548421 CCDC182A6NF36 153 aa25.47■■□□□ 1.67
BRF1-213ENST00000548421 DBTP11182 482 aaKnown RBP25.47■■□□□ 1.67
BRF1-213ENST00000548421 CTLA4P16410 223 aa25.47■■□□□ 1.67
BRF1-213ENST00000548421 CRHBPP24387 322 aa25.47■■□□□ 1.67
BRF1-213ENST00000548421 ZNF91Q05481 1191 aa25.47■■□□□ 1.67
BRF1-213ENST00000548421 TMED1Q13445 227 aa25.47■■□□□ 1.67
BRF1-213ENST00000548421 GUSBP1Q15486 140 aa25.47■■□□□ 1.67
BRF1-213ENST00000548421 GCNT2Q8N0V5 402 aa25.47■■□□□ 1.67
BRF1-213ENST00000548421 TEAD3Q99594 435 aa25.47■■□□□ 1.67
BRF1-213ENST00000548421 RACGAP1Q9H0H5 632 aa25.47■■□□□ 1.67
BRF1-213ENST00000548421 RERGLQ9H628 205 aa25.47■■□□□ 1.67
BRF1-213ENST00000548421 WARS2Q9UGM6 360 aaKnown RBP25.47■■□□□ 1.67
BRF1-213ENST00000548421 TINAGQ9UJW2 476 aa25.47■■□□□ 1.67
BRF1-213ENST00000548421 B9D1Q9UPM9 204 aa25.47■■□□□ 1.67
BRF1-213ENST00000548421 MOKQ9UQ07 419 aa25.47■■□□□ 1.67
BRF1-213ENST00000548421 TNFAIP8O95379 198 aa25.47■■□□□ 1.67
BRF1-213ENST00000548421 TIMP3P35625 211 aa25.47■■□□□ 1.67
BRF1-213ENST00000548421 PER3P56645 1201 aa25.47■■□□□ 1.67
BRF1-213ENST00000548421 LCN1P1Q5VSP4 162 aa25.47■■□□□ 1.67
BRF1-213ENST00000548421 C3P1Q6ZMU1 363 aa25.47■■□□□ 1.67
BRF1-213ENST00000548421 FAM214BQ7L5A3 538 aa25.47■■□□□ 1.67
BRF1-213ENST00000548421 NUFIP2Q7Z417 695 aaKnown RBP25.47■■□□□ 1.67
BRF1-213ENST00000548421 OR51L1Q8NGJ5 315 aa25.47■■□□□ 1.67
BRF1-213ENST00000548421 MCHR2Q969V1 340 aa25.47■■□□□ 1.67
BRF1-213ENST00000548421 EMC9Q9Y3B6 208 aa25.47■■□□□ 1.67
BRF1-213ENST00000548421 TPRKBQ9Y3C4 175 aa25.47■■□□□ 1.67
BRF1-213ENST00000548421 COL6A6A6NMZ7 2263 aa25.46■■□□□ 1.67
BRF1-213ENST00000548421 IGLV1-36A0A0B4J1U3 117 aa25.46■■□□□ 1.67
BRF1-213ENST00000548421 OR6C65A6NJZ3 312 aa25.46■■□□□ 1.67
BRF1-213ENST00000548421 GLCEO94923 617 aa25.46■■□□□ 1.67
BRF1-213ENST00000548421 PYCR1P32322 319 aa25.46■■□□□ 1.67
BRF1-213ENST00000548421 MTNR1AP48039 350 aa25.46■■□□□ 1.67
BRF1-213ENST00000548421 EIF2S3LQ2VIR3 472 aaKnown RBP25.46■■□□□ 1.67
BRF1-213ENST00000548421 RPRMLQ8N4K4 120 aa25.46■■□□□ 1.67
BRF1-213ENST00000548421 OR6K6Q8NGW6 343 aa25.46■■□□□ 1.67
BRF1-213ENST00000548421 ZNRF4Q8WWF5 429 aa25.46■■□□□ 1.67
BRF1-213ENST00000548421 KISS1RQ969F8 398 aaPredicted RBP25.46■■□□□ 1.67
BRF1-213ENST00000548421 APH1AQ96BI3 265 aa25.46■■□□□ 1.67
BRF1-213ENST00000548421 ZFP3Q96NJ6 502 aa25.46■■□□□ 1.67
BRF1-213ENST00000548421 SLCO5A1Q9H2Y9 848 aa25.46■■□□□ 1.67
BRF1-213ENST00000548421 PSORS1C1Q9UIG5 152 aa25.46■■□□□ 1.67
BRF1-213ENST00000548421 KHDRBS3O75525 346 aaKnown RBP25.45■■□□□ 1.66
BRF1-213ENST00000548421 QDPRP09417 244 aa25.45■■□□□ 1.66
BRF1-213ENST00000548421 PHYHD1Q5SRE7 291 aa25.45■■□□□ 1.66
BRF1-213ENST00000548421 ZC3HAV1Q7Z2W4 902 aaKnown RBP25.45■■□□□ 1.66
BRF1-213ENST00000548421 GPR137CQ8N3F9 429 aa25.45■■□□□ 1.66
BRF1-213ENST00000548421 ZNF540Q8NDQ6 660 aa25.45■■□□□ 1.66
BRF1-213ENST00000548421 RNFT2Q96EX2 444 aa25.45■■□□□ 1.66
BRF1-213ENST00000548421 TTYH2Q9BSA4 534 aa25.45■■□□□ 1.66
BRF1-213ENST00000548421 B3GAT2Q9NPZ5 323 aa25.45■■□□□ 1.66
BRF1-213ENST00000548421 IGKV1D-43A0A0B4J1Z2 117 aa25.44■■□□□ 1.66
BRF1-213ENST00000548421 FAM171A2A8MVW0 826 aa25.44■■□□□ 1.66
BRF1-213ENST00000548421 IL2RAP01589 272 aa25.44■■□□□ 1.66
BRF1-213ENST00000548421 CRHP06850 196 aa25.44■■□□□ 1.66
BRF1-213ENST00000548421 GSTT1P30711 240 aa25.44■■□□□ 1.66
BRF1-213ENST00000548421 SLC15A1P46059 708 aa25.44■■□□□ 1.66
BRF1-213ENST00000548421 CENPAP49450 140 aa25.44■■□□□ 1.66
BRF1-213ENST00000548421 ZNF133P52736 654 aaPredicted RBP25.44■■□□□ 1.66
BRF1-213ENST00000548421 CASP6P55212 293 aa25.44■■□□□ 1.66
BRF1-213ENST00000548421 KCTD21Q4G0X4 260 aa25.44■■□□□ 1.66
BRF1-213ENST00000548421 LINC01590Q5TEZ4 76 aa25.44■■□□□ 1.66
BRF1-213ENST00000548421 LRFN4Q6PJG9 635 aa25.44■■□□□ 1.66
BRF1-213ENST00000548421 SLC25A47Q6Q0C1 308 aa25.44■■□□□ 1.66
BRF1-213ENST00000548421 ZNF100Q8IYN0 542 aa25.44■■□□□ 1.66
BRF1-213ENST00000548421 RHNO1Q9BSD3 238 aa25.44■■□□□ 1.66
BRF1-213ENST00000548421 ULBP2Q9BZM5 246 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms