RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 CDRT15Q96T59 188 aa3.55□□□□□ -1.84
CBX5-203ENST00000547872 DHRS9Q9BPW9 319 aa3.55□□□□□ -1.84
CBX5-203ENST00000547872 C19orf43Q9BQ61 176 aa3.55□□□□□ -1.84
CBX5-203ENST00000547872 ABHD6Q9BV23 337 aa3.55□□□□□ -1.84
CBX5-203ENST00000547872 FNDC11Q9BVV2 318 aa3.55□□□□□ -1.84
CBX5-203ENST00000547872 SUCNR1Q9BXA5 334 aa3.55□□□□□ -1.84
CBX5-203ENST00000547872 BARHL1Q9BZE3 327 aa3.55□□□□□ -1.84
CBX5-203ENST00000547872 HSD3B7Q9H2F3 369 aa3.55□□□□□ -1.84
CBX5-203ENST00000547872 PPIL3Q9H2H8 161 aaKnown RBP3.55□□□□□ -1.84
CBX5-203ENST00000547872 OR51B5Q9H339 312 aa3.55□□□□□ -1.84
CBX5-203ENST00000547872 TSPY26PQ9H489 355 aa3.55□□□□□ -1.84
CBX5-203ENST00000547872 RPF2Q9H7B2 306 aaKnown RBP3.55□□□□□ -1.84
CBX5-203ENST00000547872 ANKRA2Q9H9E1 313 aa3.55□□□□□ -1.84
CBX5-203ENST00000547872 PARVBQ9HBI1 364 aa3.55□□□□□ -1.84
CBX5-203ENST00000547872 PFDN4Q9NQP4 134 aa3.55□□□□□ -1.84
CBX5-203ENST00000547872 GIMAP4Q9NUV9 329 aa3.55□□□□□ -1.84
CBX5-203ENST00000547872 INTS10Q9NVR2 710 aaKnown RBP3.55□□□□□ -1.84
CBX5-203ENST00000547872 FLRT3Q9NZU0 649 aa3.55□□□□□ -1.84
CBX5-203ENST00000547872 RHCGQ9UBD6 479 aa3.55□□□□□ -1.84
CBX5-203ENST00000547872 LCMT1Q9UIC8 334 aa3.55□□□□□ -1.84
CBX5-203ENST00000547872 IKZF3Q9UKT9 509 aa3.55□□□□□ -1.84
CBX5-203ENST00000547872 MCTS1Q9ULC4 181 aaKnown RBP3.55□□□□□ -1.84
CBX5-203ENST00000547872 PCDHGB4Q9UN71 923 aa3.55□□□□□ -1.84
CBX5-203ENST00000547872 PACSIN2Q9UNF0 486 aaPredicted RBP3.55□□□□□ -1.84
CBX5-203ENST00000547872 WBP11Q9Y2W2 641 aaKnown RBP3.55□□□□□ -1.84
CBX5-203ENST00000547872 GRIP1Q9Y3R0 1128 aa3.55□□□□□ -1.84
CBX5-203ENST00000547872 SNX8Q9Y5X2 465 aa3.55□□□□□ -1.84
CBX5-203ENST00000547872 MAD1L1Q9Y6D9 718 aa3.55□□□□□ -1.84
CBX5-203ENST00000547872 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.55□□□□□ -1.84
CBX5-203ENST00000547872 MED12Q93074 2177 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 IGHV3OR16-10A0A075B7F0 116 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 LOC390937A0A1W2PQ73 354 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 A0A1W2PRB8 838 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 CIB4A0PJX0 185 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 B4DXG7 233 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 GOLGA8MH3BSY2 632 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 H7C417 338 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 SS18L1O75177 396 aaPredicted RBP3.54□□□□□ -1.84
CBX5-203ENST00000547872 GCM2O75603 506 aaPredicted RBP3.54□□□□□ -1.84
CBX5-203ENST00000547872 GAS8-AS1O95177 125 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 GYPCP04921 128 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 PATE4P0C8F1 98 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 C1GALT1C1LP0DN25 315 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 CPMP14384 443 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 PSMB1P20618 241 aaKnown RBP3.54□□□□□ -1.84
CBX5-203ENST00000547872 OGNP20774 298 aaKnown RBP3.54□□□□□ -1.84
CBX5-203ENST00000547872 GPX3P22352 226 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 ATP5A1P25705 553 aaKnown RBP3.54□□□□□ -1.84
CBX5-203ENST00000547872 DEKP35659 375 aaKnown RBP3.54□□□□□ -1.84
CBX5-203ENST00000547872 KRT20P35900 424 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 FEN1P39748 380 aaKnown RBP3.54□□□□□ -1.84
CBX5-203ENST00000547872 B3GALT5-AS1P59052 145 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 HMGCS1Q01581 520 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 CHRNB3Q05901 458 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 SLMAPQ14BN4 828 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 TRIP13Q15645 432 aaPredicted RBP3.54□□□□□ -1.84
CBX5-203ENST00000547872 ZNF311Q5JNZ3 666 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 TFAP2EQ6VUC0 442 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 GALNT10Q86SR1 603 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 TUSC5Q8IXB3 177 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 KIR3DL3Q8N743 410 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 CCDC89Q8N998 374 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 GATSQ8NAP1 163 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 PAPD5Q8NDF8 572 aaKnown RBP3.54□□□□□ -1.84
CBX5-203ENST00000547872 OR4K1Q8NGD4 311 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 OR52R1Q8NGF1 315 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 C1orf54Q8WWF1 131 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 HSD17B8Q92506 261 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 HGDQ93099 445 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 TMEM186Q96B77 213 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 TMCO6Q96DC7 493 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 GMPPAQ96IJ6 420 aaPredicted RBP3.54□□□□□ -1.84
CBX5-203ENST00000547872 CHP1Q99653 195 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 INPP5KQ9BT40 448 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 MMP27Q9H306 513 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 PELI2Q9HAT8 420 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 MYNNQ9NPC7 610 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 IARS2Q9NSE4 1012 aaKnown RBP3.54□□□□□ -1.84
CBX5-203ENST00000547872 TREX1Q9NSU2 369 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 C20orf96Q9NUD7 363 aaPredicted RBP3.54□□□□□ -1.84
CBX5-203ENST00000547872 ANO10Q9NW15 660 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 TREM2Q9NZC2 230 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 MRPL15Q9P015 296 aaKnown RBP3.54□□□□□ -1.84
CBX5-203ENST00000547872 PTBP2Q9UKA9 531 aaKnown RBP3.54□□□□□ -1.84
CBX5-203ENST00000547872 PLLPQ9Y342 182 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 DHRS7Q9Y394 339 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 PKD1L1Q8TDX9 2849 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 TENM1Q9UKZ4 2725 aa3.54□□□□□ -1.84
CBX5-203ENST00000547872 B4DSR2 109 aa3.53□□□□□ -1.84
CBX5-203ENST00000547872 NDUFS8O00217 210 aa3.53□□□□□ -1.84
CBX5-203ENST00000547872 KERAO60938 352 aa3.53□□□□□ -1.84
CBX5-203ENST00000547872 ERAL1O75616 437 aaKnown RBP3.53□□□□□ -1.84
CBX5-203ENST00000547872 STAMBPO95630 424 aa3.53□□□□□ -1.84
CBX5-203ENST00000547872 AIFM1O95831 613 aa3.53□□□□□ -1.84
CBX5-203ENST00000547872 TBX6O95947 436 aaPredicted RBP3.53□□□□□ -1.84
CBX5-203ENST00000547872 PNPP00491 289 aa3.53□□□□□ -1.84
CBX5-203ENST00000547872 APOHP02749 345 aaPredicted RBP3.53□□□□□ -1.84
CBX5-203ENST00000547872 RHOXF2BP0C7M4 288 aa3.53□□□□□ -1.84
CBX5-203ENST00000547872 GGT1P19440 569 aa3.53□□□□□ -1.84
CBX5-203ENST00000547872 TCN1P20061 433 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms