RNA–Protein interactions for RNA: ENST00000546741.2

PKP2-204, Transcript of plakophilin 2, humanhuman

TSL 2

Gene PKP2, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-204ENST00000546741 CENPAP49450 140 aa13.2□□□□□ -0.3
PKP2-204ENST00000546741 STARP49675 285 aa13.2□□□□□ -0.3
PKP2-204ENST00000546741 LHX2P50458 406 aa13.2□□□□□ -0.3
PKP2-204ENST00000546741 LSM3P62310 102 aaKnown RBP13.2□□□□□ -0.3
PKP2-204ENST00000546741 ARG2P78540 354 aa13.2□□□□□ -0.3
PKP2-204ENST00000546741 HSF2Q03933 536 aa13.2□□□□□ -0.3
PKP2-204ENST00000546741 HIST3H3Q16695 136 aa13.2□□□□□ -0.3
PKP2-204ENST00000546741 SOWAHCQ53LP3 525 aaPredicted RBP13.2□□□□□ -0.3
PKP2-204ENST00000546741 TMEM225Q6GV28 225 aa13.2□□□□□ -0.3
PKP2-204ENST00000546741 GDPGP1Q6ZNW5 385 aa13.2□□□□□ -0.3
PKP2-204ENST00000546741 VASH1Q7L8A9 365 aaPredicted RBP13.2□□□□□ -0.3
PKP2-204ENST00000546741 SYS1Q8N2H4 156 aa13.2□□□□□ -0.3
PKP2-204ENST00000546741 OR6X1Q8NH79 312 aa13.2□□□□□ -0.3
PKP2-204ENST00000546741 SNIP1Q8TAD8 396 aaKnown RBP13.2□□□□□ -0.3
PKP2-204ENST00000546741 NDNFQ8TB73 568 aa13.2□□□□□ -0.3
PKP2-204ENST00000546741 UCN2Q96RP3 112 aa13.2□□□□□ -0.3
PKP2-204ENST00000546741 SMAD5Q99717 465 aaKnown RBP13.2□□□□□ -0.3
PKP2-204ENST00000546741 NAA11Q9BSU3 229 aaPredicted RBP13.2□□□□□ -0.3
PKP2-204ENST00000546741 DCUN1D5Q9BTE7 237 aa13.2□□□□□ -0.3
PKP2-204ENST00000546741 EMC6Q9BV81 110 aa13.2□□□□□ -0.3
PKP2-204ENST00000546741 MRPL22Q9NWU5 206 aaKnown RBP13.2□□□□□ -0.3
PKP2-204ENST00000546741 SIRT4Q9Y6E7 314 aaPredicted RBP13.2□□□□□ -0.3
PKP2-204ENST00000546741 IGKV1D-43A0A0B4J1Z2 117 aa13.19□□□□□ -0.3
PKP2-204ENST00000546741 TVP23AA6NH52 213 aa13.19□□□□□ -0.3
PKP2-204ENST00000546741 PRR32B1ATL7 298 aa13.19□□□□□ -0.3
PKP2-204ENST00000546741 SMAD9O15198 467 aaKnown RBP13.19□□□□□ -0.3
PKP2-204ENST00000546741 AKAP8O43823 692 aaKnown RBP13.19□□□□□ -0.3
PKP2-204ENST00000546741 CRABP1P29762 137 aa13.19□□□□□ -0.3
PKP2-204ENST00000546741 BLVRAP53004 296 aa13.19□□□□□ -0.3
PKP2-204ENST00000546741 OR12D2P58182 307 aa13.19□□□□□ -0.3
PKP2-204ENST00000546741 GPR50Q13585 617 aa13.19□□□□□ -0.3
PKP2-204ENST00000546741 SLC17A1Q14916 467 aa13.19□□□□□ -0.3
PKP2-204ENST00000546741 TIMM50Q3ZCQ8 353 aa13.19□□□□□ -0.3
PKP2-204ENST00000546741 CD200R1LQ6Q8B3 271 aa13.19□□□□□ -0.3
PKP2-204ENST00000546741 CREB3L2Q70SY1 520 aa13.19□□□□□ -0.3
PKP2-204ENST00000546741 TRILQ7L0X0 811 aa13.19□□□□□ -0.3
PKP2-204ENST00000546741 KLBQ86Z14 1044 aa13.19□□□□□ -0.3
PKP2-204ENST00000546741 EGFL6Q8IUX8 553 aa13.19□□□□□ -0.3
PKP2-204ENST00000546741 TMEM178AQ8NBL3 297 aa13.19□□□□□ -0.3
PKP2-204ENST00000546741 OR2V1Q8NHB1 315 aa13.19□□□□□ -0.3
PKP2-204ENST00000546741 DYNC2LI1Q8TCX1 351 aa13.19□□□□□ -0.3
PKP2-204ENST00000546741 UFD1Q92890 307 aa13.19□□□□□ -0.3
PKP2-204ENST00000546741 TRMT61AQ96FX7 289 aaKnown RBP13.19□□□□□ -0.3
PKP2-204ENST00000546741 CENPOQ9BU64 300 aa13.19□□□□□ -0.3
PKP2-204ENST00000546741 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.19□□□□□ -0.3
PKP2-204ENST00000546741 RNF167Q9H6Y7 350 aa13.19□□□□□ -0.3
PKP2-204ENST00000546741 WDR76Q9H967 626 aa13.19□□□□□ -0.3
PKP2-204ENST00000546741 ACKR4Q9NPB9 350 aa13.19□□□□□ -0.3
PKP2-204ENST00000546741 TNRC6AQ8NDV7 1962 aaKnown RBP13.19□□□□□ -0.3
PKP2-204ENST00000546741 CNTRLQ7Z7A1 2325 aa13.18□□□□□ -0.3
PKP2-204ENST00000546741 SLC35F4A4IF30 521 aa13.18□□□□□ -0.3
PKP2-204ENST00000546741 FAM166BA8MTA8 275 aa13.18□□□□□ -0.3
PKP2-204ENST00000546741 E9PI62 339 aa13.18□□□□□ -0.3
PKP2-204ENST00000546741 EIF1AYO14602 144 aaKnown RBP13.18□□□□□ -0.3
PKP2-204ENST00000546741 KLK10O43240 276 aa13.18□□□□□ -0.3
PKP2-204ENST00000546741 LRRTM2O43300 516 aa13.18□□□□□ -0.3
PKP2-204ENST00000546741 MT-ND5P03915 603 aa13.18□□□□□ -0.3
PKP2-204ENST00000546741 ZNF43P17038 809 aa13.18□□□□□ -0.3
PKP2-204ENST00000546741 ENPP1P22413 925 aa13.18□□□□□ -0.3
PKP2-204ENST00000546741 PSMA1P25786 263 aaKnown RBP13.18□□□□□ -0.3
PKP2-204ENST00000546741 CAPZA2P47755 286 aa13.18□□□□□ -0.3
PKP2-204ENST00000546741 CLDN18P56856 261 aa13.18□□□□□ -0.3
PKP2-204ENST00000546741 FMODQ06828 376 aa13.18□□□□□ -0.3
PKP2-204ENST00000546741 HBMQ6B0K9 141 aa13.18□□□□□ -0.3
PKP2-204ENST00000546741 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.18□□□□□ -0.3
PKP2-204ENST00000546741 GPAT4Q86UL3 456 aa13.18□□□□□ -0.3
PKP2-204ENST00000546741 ZIC4Q8N9L1 334 aa13.18□□□□□ -0.3
PKP2-204ENST00000546741 SYT14Q8NB59 555 aa13.18□□□□□ -0.3
PKP2-204ENST00000546741 RNF166Q96A37 237 aaPredicted RBP13.18□□□□□ -0.3
PKP2-204ENST00000546741 SLC25A44Q96H78 314 aaPredicted RBP13.18□□□□□ -0.3
PKP2-204ENST00000546741 C4orf36Q96KX1 117 aa13.18□□□□□ -0.3
PKP2-204ENST00000546741 ADAD1Q96M93 576 aaKnown RBP13.18□□□□□ -0.3
PKP2-204ENST00000546741 MNTQ99583 582 aa13.18□□□□□ -0.3
PKP2-204ENST00000546741 CHCHD6Q9BRQ6 235 aa13.18□□□□□ -0.3
PKP2-204ENST00000546741 SF3B5Q9BWJ5 86 aaKnown RBP13.18□□□□□ -0.3
PKP2-204ENST00000546741 STUB1Q9UNE7 303 aa13.18□□□□□ -0.3
PKP2-204ENST00000546741 COA3Q9Y2R0 106 aaPredicted RBP13.18□□□□□ -0.3
PKP2-204ENST00000546741 KLHDC2Q9Y2U9 406 aa13.18□□□□□ -0.3
PKP2-204ENST00000546741 MSRB2Q9Y3D2 182 aa13.18□□□□□ -0.3
PKP2-204ENST00000546741 ZFHX4Q86UP3 3567 aa13.18□□□□□ -0.3
PKP2-204ENST00000546741 IGHV3-15A0A0B4J1V0 119 aa13.17□□□□□ -0.3
PKP2-204ENST00000546741 CENPBD1B2RD01 187 aa13.17□□□□□ -0.3
PKP2-204ENST00000546741 ZNF670-ZNF695F2Z2N8 137 aa13.17□□□□□ -0.3
PKP2-204ENST00000546741 GAAP10253 952 aa13.17□□□□□ -0.3
PKP2-204ENST00000546741 POU3F2P20265 443 aaPredicted RBP13.17□□□□□ -0.3
PKP2-204ENST00000546741 ALOX5APP20292 161 aa13.17□□□□□ -0.3
PKP2-204ENST00000546741 CARD18P57730 90 aa13.17□□□□□ -0.3
PKP2-204ENST00000546741 RPS3AP61247 264 aaKnown RBP13.17□□□□□ -0.3
PKP2-204ENST00000546741 ACTA2P62736 377 aa13.17□□□□□ -0.3
PKP2-204ENST00000546741 RPS25P62851 125 aaKnown RBP13.17□□□□□ -0.3
PKP2-204ENST00000546741 ACTG2P63267 376 aa13.17□□□□□ -0.3
PKP2-204ENST00000546741 PLGLB1Q02325 96 aa13.17□□□□□ -0.3
PKP2-204ENST00000546741 RNFT1Q5M7Z0 435 aa13.17□□□□□ -0.3
PKP2-204ENST00000546741 ABLIM2Q6H8Q1 611 aa13.17□□□□□ -0.3
PKP2-204ENST00000546741 HDDC2Q7Z4H3 204 aa13.17□□□□□ -0.3
PKP2-204ENST00000546741 ZFP41Q8N8Y5 198 aa13.17□□□□□ -0.3
PKP2-204ENST00000546741 NOXO1Q8NFA2 376 aa13.17□□□□□ -0.3
PKP2-204ENST00000546741 OR10D3Q8NH80 312 aa13.17□□□□□ -0.3
PKP2-204ENST00000546741 DACH2Q96NX9 599 aa13.17□□□□□ -0.3
PKP2-204ENST00000546741 INTS14Q96SY0 518 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms