RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 KCNS2Q9ULS6 477 aa8.09□□□□□ -1.11
YBX3-218ENST00000546298 MED31Q9Y3C7 131 aa8.09□□□□□ -1.11
YBX3-218ENST00000546298 NF1P21359 2839 aa8.09□□□□□ -1.11
YBX3-218ENST00000546298 TMEM129A0AVI4 362 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 GMNCA6NCL1 334 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 FAM220BPB1ANY3 271 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 M0R233 179 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 SYNGR3O43761 229 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 OR7A10O76100 309 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 ADRA2AP08913 450 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 QDPRP09417 244 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 ZNF23P17027 643 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 HNF1AP20823 631 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 GIFP27352 417 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 KDELR2P33947 212 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 DAP3P51398 398 aaKnown RBP8.08□□□□□ -1.12
YBX3-218ENST00000546298 CHN2P52757 468 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 CRYBA2P53672 197 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 ST3GAL3Q11203 375 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 PIN1Q13526 163 aaPredicted RBP8.08□□□□□ -1.12
YBX3-218ENST00000546298 MELKQ14680 651 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 RAB39AQ14964 217 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 CYBRD1Q53TN4 286 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 FAM166AQ6J272 317 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 UGT2A3Q6UWM9 527 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 CXXC5Q7LFL8 322 aaKnown RBP8.08□□□□□ -1.12
YBX3-218ENST00000546298 SKA3Q8IX90 412 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 LRRC17Q8N6Y2 441 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 OR2T12Q8NG77 320 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 OR1J2Q8NGS2 313 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 RP9Q8TA86 221 aaKnown RBP8.08□□□□□ -1.12
YBX3-218ENST00000546298 TMEM239Q8WW34 195 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 LIPHQ8WWY8 451 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 HPS1Q92902 700 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 ZNF75AQ96N20 296 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 KCNN2Q9H2S1 579 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 CDH20Q9HBT6 801 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 MEPEQ9NQ76 525 aaPredicted RBP8.08□□□□□ -1.12
YBX3-218ENST00000546298 INIPQ9NRY2 104 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 SLC7A8Q9UHI5 535 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 GPR160Q9UJ42 338 aa8.08□□□□□ -1.12
YBX3-218ENST00000546298 ZNF346Q9UL40 294 aaKnown RBP8.08□□□□□ -1.12
YBX3-218ENST00000546298 IGHV4-61A0A0C4DH41 118 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 IQCMA0A1B0GVH7 501 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 ELOVL7A1L3X0 281 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 RNF212BA8MTL3 300 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 NDUFAB1O14561 156 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 CCDC22O60826 627 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 TGFAP01135 160 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 F13BP05160 661 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 PGA4P0DJD7 388 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 PGA3P0DJD8 388 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 ZNF16P17020 682 aaPredicted RBP8.07□□□□□ -1.12
YBX3-218ENST00000546298 UGT2B15P54855 530 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 SELENOWP63302 87 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 RPL18Q07020 188 aaKnown RBP8.07□□□□□ -1.12
YBX3-218ENST00000546298 TAF11Q15544 211 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 FXNQ16595 210 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 MOGQ16653 247 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 LRRC23Q53EV4 343 aaPredicted RBP8.07□□□□□ -1.12
YBX3-218ENST00000546298 RGS7BPQ6MZT1 257 aaPredicted RBP8.07□□□□□ -1.12
YBX3-218ENST00000546298 SLC16A14Q7RTX9 510 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 TSPYL5Q86VY4 417 aaPredicted RBP8.07□□□□□ -1.12
YBX3-218ENST00000546298 NKAIN4Q8IVV8 208 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 WDFY1Q8IWB7 410 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 MICU2Q8IYU8 434 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 CDK20Q8IZL9 346 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 SLC30A7Q8NEW0 376 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 OR4K5Q8NGD3 323 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 FNDC8Q8TC99 324 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 TMEM255BQ8WV15 326 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 TMEM158Q8WZ71 300 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 MCHR2Q969V1 340 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 TPD52L3Q96J77 140 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 MRPL37Q9BZE1 423 aaKnown RBP8.07□□□□□ -1.12
YBX3-218ENST00000546298 BPESC1Q9GZL8 116 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 ZNF224Q9NZL3 707 aa8.07□□□□□ -1.12
YBX3-218ENST00000546298 SONP18583 2426 aaKnown RBP8.07□□□□□ -1.12
YBX3-218ENST00000546298 ZFHX3Q15911 3703 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 A0A1W2PPW3 197 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 NPIPB13A6NJU9 1138 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 NPIPB4C9JG80 1138 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 TRMUO75648 421 aaKnown RBP8.06□□□□□ -1.12
YBX3-218ENST00000546298 PATE4P0C8F1 98 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 ACADSP16219 412 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 TNFRSF1BP20333 461 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 PCMT1P22061 227 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 THBS2P35442 1172 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 AQP2P41181 271 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 GUCA1AP43080 201 aaPredicted RBP8.06□□□□□ -1.12
YBX3-218ENST00000546298 RAD52P43351 418 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 OR1E2P47887 323 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 MRPS34P82930 218 aaKnown RBP8.06□□□□□ -1.12
YBX3-218ENST00000546298 HSF2Q03933 536 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 SF3A3Q12874 501 aaKnown RBP eCLIP8.06□□□□□ -1.12
YBX3-218ENST00000546298 HIST3H3Q16695 136 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 TBC1D28Q2M2D7 210 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 ANKDD1AQ495B1 522 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 C10orf128Q5T292 105 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 UNQ6126/PRO20091Q6UXV3 157 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms