RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 SLC19A1P41440 591 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 DYRK1AQ13627 763 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 ESCO2Q56NI9 601 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 ZNF628Q5EBL2 1059 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 B3GLCTQ6Y288 498 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 OR5H6Q8NGV6 325 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 DCBLD2Q96PD2 775 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 ACKR4Q9NPB9 350 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 NUDT19A8MXV4 375 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 CD22P20273 847 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 ACSM1Q08AH1 577 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 MARCH3Q86UD3 253 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 BCORP1Q8N888 145 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 OR9K2Q8NGE7 335 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 SLC37A2Q8TED4 501 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 LINC01599Q8WXQ3 324 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 UBE2FQ969M7 185 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 SGK3Q96BR1 496 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 CSF3RQ99062 836 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 TBC1D29Q9UFV1 150 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 PPIL1Q9Y3C6 166 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 ZNF728P0DKX0 622 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 PXNP49023 591 aaPredicted RBP11.5□□□□□ -0.57
COL4A6-209ENST00000545689 TRMT12Q53H54 448 aaKnown RBP11.5□□□□□ -0.57
COL4A6-209ENST00000545689 FOXB2Q5VYV0 432 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 CA13Q8N1Q1 262 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 SCARB1Q8WTV0 552 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 TEX101Q9BY14 249 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 ATPIF1Q9UII2 106 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 NOSIPQ9Y314 301 aaKnown RBP11.5□□□□□ -0.57
COL4A6-209ENST00000545689 MN1Q10571 1320 aaPredicted RBP11.5□□□□□ -0.57
COL4A6-209ENST00000545689 ZNF814B7Z6K7 855 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 OLFM2O95897 454 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 BLVRBP30043 206 aaPredicted RBP11.5□□□□□ -0.57
COL4A6-209ENST00000545689 MAP2K6P52564 334 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 RRADP55042 308 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 MORN4Q8NDC4 146 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 POC1BQ8TC44 478 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 ABHD5Q8WTS1 349 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 BCL7CQ8WUZ0 217 aaPredicted RBP11.5□□□□□ -0.57
COL4A6-209ENST00000545689 MVB12AQ96EY5 273 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 AP1S3Q96PC3 154 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 NECAP2Q9NVZ3 263 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 PAPPA2Q9BXP8 1791 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 C17orf112F2Z3M2 114 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 PPICP45877 212 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 CADM3Q8N126 398 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 LRRC18Q8N456 261 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 ZNF511Q8NB15 262 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 BORCS7Q96B45 105 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 AKIP1Q9NQ31 210 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 PLSCR5A0PG75 271 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 SULT1C4O75897 302 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 CAMK2BQ13554 666 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 ACSM5Q6NUN0 579 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 PRR18Q8N4B5 295 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 PXT1Q8NFP0 134 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 HLA-CQ95604 372 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 OPALINQ96PE5 141 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 SELENOIQ9C0D9 397 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 IL21Q9HBE4 155 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 VAMP5O95183 116 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 RAB6AP20340 208 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 IL2RGP31785 369 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 IDH3GP51553 393 aaPredicted RBP11.49□□□□□ -0.57
COL4A6-209ENST00000545689 TAS2R30P59541 319 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 DOC2BQ14184 412 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 GLYATL3Q5SZD4 288 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 S100A7AQ86SG5 101 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 NAXDQ8IW45 347 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 PRSS35Q8N3Z0 413 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 ANKRD9Q96BM1 317 aaPredicted RBP11.49□□□□□ -0.57
COL4A6-209ENST00000545689 BTF3L4Q96K17 158 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 IKZF5Q9H5V7 419 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 HINT3Q9NQE9 182 aaKnown RBP11.49□□□□□ -0.57
COL4A6-209ENST00000545689 SPI1P17947 270 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 CARD18P57730 90 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 TLE4Q04727 773 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 PMPCAQ10713 525 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 HEPHL1Q6MZM0 1159 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 USP51Q70EK9 711 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 DCXRQ7Z4W1 244 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 TMEM99Q8N816 258 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 CHST11Q9NPF2 352 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 EXOSC3Q9NQT5 275 aaKnown RBP11.49□□□□□ -0.57
COL4A6-209ENST00000545689 GLULP15104 373 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 ITGB8P26012 769 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 ARSJQ5FYB0 599 aaPredicted RBP11.49□□□□□ -0.57
COL4A6-209ENST00000545689 TCTN3Q6NUS6 607 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 OR51A2Q8NGJ7 313 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 FGGYQ96C11 551 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 Q96M85 177 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 PRMT8Q9NR22 394 aaPredicted RBP11.49□□□□□ -0.57
COL4A6-209ENST00000545689 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 FADS1O60427 444 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 GMDSO60547 372 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 RAB5CP51148 216 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 TPBGQ13641 420 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 FBXW12Q6X9E4 464 aa11.49□□□□□ -0.57
COL4A6-209ENST00000545689 OR51D1Q8NGF3 324 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms