RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 SLC7A8Q9UHI5 535 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 DUSP13Q9UII6 198 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 WIPI2Q9Y4P8 454 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 IGKV1D-42A0A075B6H8 117 aa10.91□□□□□ -0.66
USP28-212ENST00000544750 A0A0G2JPF8 293 aa10.91□□□□□ -0.66
USP28-212ENST00000544750 HNRNPCL2B2RXH8 293 aa10.91□□□□□ -0.66
USP28-212ENST00000544750 HNRNPCL3B7ZW38 293 aa10.91□□□□□ -0.66
USP28-212ENST00000544750 AKAP8O43823 692 aaKnown RBP10.91□□□□□ -0.66
USP28-212ENST00000544750 OR2T1O43869 369 aa10.91□□□□□ -0.66
USP28-212ENST00000544750 HNRNPCL1O60812 293 aaKnown RBP10.91□□□□□ -0.66
USP28-212ENST00000544750 HNRNPCL4P0DMR1 293 aa10.91□□□□□ -0.66
USP28-212ENST00000544750 HLA-DOBP13765 273 aa10.91□□□□□ -0.66
USP28-212ENST00000544750 B4GALT1P15291 398 aa10.91□□□□□ -0.66
USP28-212ENST00000544750 ZNF250P15622 560 aa10.91□□□□□ -0.66
USP28-212ENST00000544750 PPIBP23284 216 aaKnown RBP10.91□□□□□ -0.66
USP28-212ENST00000544750 FPR2P25090 351 aa10.91□□□□□ -0.66
USP28-212ENST00000544750 CCL8P80075 99 aa10.91□□□□□ -0.66
USP28-212ENST00000544750 GALK2Q01415 458 aa10.91□□□□□ -0.66
USP28-212ENST00000544750 KLF10Q13118 480 aa10.91□□□□□ -0.66
USP28-212ENST00000544750 C1DQ13901 141 aaKnown RBP10.91□□□□□ -0.66
USP28-212ENST00000544750 RAB39AQ14964 217 aa10.91□□□□□ -0.66
USP28-212ENST00000544750 ALKBH6Q3KRA9 238 aa10.91□□□□□ -0.66
USP28-212ENST00000544750 FAM69AQ5T7M9 428 aa10.91□□□□□ -0.66
USP28-212ENST00000544750 GKAP1Q5VSY0 366 aaPredicted RBP10.91□□□□□ -0.66
USP28-212ENST00000544750 H1FNTQ75WM6 255 aaPredicted RBP10.91□□□□□ -0.66
USP28-212ENST00000544750 SIGLECL1Q8N7X8 197 aa10.91□□□□□ -0.66
USP28-212ENST00000544750 FGFBP3Q8TAT2 258 aa10.91□□□□□ -0.66
USP28-212ENST00000544750 SLC35B4Q969S0 331 aa10.91□□□□□ -0.66
USP28-212ENST00000544750 SLC41A3Q96GZ6 507 aa10.91□□□□□ -0.66
USP28-212ENST00000544750 TSPAN32Q96QS1 320 aa10.91□□□□□ -0.66
USP28-212ENST00000544750 CGREF1Q99674 301 aa10.91□□□□□ -0.66
USP28-212ENST00000544750 EMC6Q9BV81 110 aa10.91□□□□□ -0.66
USP28-212ENST00000544750 C7orf69Q9H7B7 122 aa10.91□□□□□ -0.66
USP28-212ENST00000544750 C12orf10Q9HB07 376 aa10.91□□□□□ -0.66
USP28-212ENST00000544750 HINT3Q9NQE9 182 aaKnown RBP10.91□□□□□ -0.66
USP28-212ENST00000544750 TAAR3PQ9P1P4 343 aa10.91□□□□□ -0.66
USP28-212ENST00000544750 NDUFAF1Q9Y375 327 aa10.91□□□□□ -0.66
USP28-212ENST00000544750 A0A1W2PPW3 197 aa10.9□□□□□ -0.66
USP28-212ENST00000544750 POM121CA8CG34 1229 aa10.9□□□□□ -0.66
USP28-212ENST00000544750 FXYD1O00168 92 aa10.9□□□□□ -0.66
USP28-212ENST00000544750 ANGPT2O15123 496 aa10.9□□□□□ -0.66
USP28-212ENST00000544750 SERPINA5P05154 406 aa10.9□□□□□ -0.66
USP28-212ENST00000544750 GTF2E2P29084 291 aaKnown RBP10.9□□□□□ -0.66
USP28-212ENST00000544750 HOXC5Q00444 222 aa10.9□□□□□ -0.66
USP28-212ENST00000544750 PCGF3Q3KNV8 242 aa10.9□□□□□ -0.66
USP28-212ENST00000544750 GLIPR1L2Q4G1C9 344 aa10.9□□□□□ -0.66
USP28-212ENST00000544750 GCNT6Q5T4J0 391 aa10.9□□□□□ -0.66
USP28-212ENST00000544750 CARD17Q5XLA6 110 aa10.9□□□□□ -0.66
USP28-212ENST00000544750 RGS7BPQ6MZT1 257 aaPredicted RBP10.9□□□□□ -0.66
USP28-212ENST00000544750 C5orf46Q6UWT4 87 aa10.9□□□□□ -0.66
USP28-212ENST00000544750 NET1Q7Z628 596 aaPredicted RBP10.9□□□□□ -0.66
USP28-212ENST00000544750 COMTD1Q86VU5 262 aa10.9□□□□□ -0.66
USP28-212ENST00000544750 PTOV1Q86YD1 416 aa10.9□□□□□ -0.66
USP28-212ENST00000544750 PAQR4Q8N4S7 273 aaPredicted RBP10.9□□□□□ -0.66
USP28-212ENST00000544750 SYT14Q8NB59 555 aa10.9□□□□□ -0.66
USP28-212ENST00000544750 NFKBIDQ8NI38 313 aa10.9□□□□□ -0.66
USP28-212ENST00000544750 TXNDC15Q96J42 360 aa10.9□□□□□ -0.66
USP28-212ENST00000544750 FOXB1Q99853 325 aa10.9□□□□□ -0.66
USP28-212ENST00000544750 SLITRK2Q9H156 845 aa10.9□□□□□ -0.66
USP28-212ENST00000544750 TMEM38AQ9H6F2 299 aa10.9□□□□□ -0.66
USP28-212ENST00000544750 ZMAT3Q9HA38 289 aaKnown RBP10.9□□□□□ -0.66
USP28-212ENST00000544750 MED29Q9NX70 200 aa10.9□□□□□ -0.66
USP28-212ENST00000544750 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.9□□□□□ -0.66
USP28-212ENST00000544750 FBXL3Q9UKT7 428 aa10.9□□□□□ -0.66
USP28-212ENST00000544750 CACNG2Q9Y698 323 aa10.9□□□□□ -0.66
USP28-212ENST00000544750 PPIAL4EA0A075B759 164 aa10.89□□□□□ -0.67
USP28-212ENST00000544750 PPIAL4CA0A0B4J2A2 164 aa10.89□□□□□ -0.67
USP28-212ENST00000544750 IGHV1-69-2A0A0G2JMI3 117 aa10.89□□□□□ -0.67
USP28-212ENST00000544750 DNAJC9-AS1A6NH13 148 aa10.89□□□□□ -0.67
USP28-212ENST00000544750 PPIAL4DF5H284 164 aa10.89□□□□□ -0.67
USP28-212ENST00000544750 UBL3O95164 117 aa10.89□□□□□ -0.67
USP28-212ENST00000544750 RAB36O95755 333 aa10.89□□□□□ -0.67
USP28-212ENST00000544750 PATE4P0C8F1 98 aa10.89□□□□□ -0.67
USP28-212ENST00000544750 PPIAL4FP0DN26 164 aa10.89□□□□□ -0.67
USP28-212ENST00000544750 MTPNP58546 118 aa10.89□□□□□ -0.67
USP28-212ENST00000544750 ERVS71-1P61550 626 aa10.89□□□□□ -0.67
USP28-212ENST00000544750 NFYCQ13952 458 aa10.89□□□□□ -0.67
USP28-212ENST00000544750 LARS2Q15031 903 aaKnown RBP10.89□□□□□ -0.67
USP28-212ENST00000544750 NKPD1Q17RQ9 610 aa10.89□□□□□ -0.67
USP28-212ENST00000544750 UEVLDQ8IX04 471 aa10.89□□□□□ -0.67
USP28-212ENST00000544750 SKA3Q8IX90 412 aa10.89□□□□□ -0.67
USP28-212ENST00000544750 DEFB108BQ8NET1 73 aa10.89□□□□□ -0.67
USP28-212ENST00000544750 BBS10Q8TAM1 723 aa10.89□□□□□ -0.67
USP28-212ENST00000544750 SLC38A4Q969I6 547 aa10.89□□□□□ -0.67
USP28-212ENST00000544750 ZNF48Q96MX3 618 aaPredicted RBP10.89□□□□□ -0.67
USP28-212ENST00000544750 DUX5Q96PT3 197 aa10.89□□□□□ -0.67
USP28-212ENST00000544750 ARMCX1Q9P291 453 aa10.89□□□□□ -0.67
USP28-212ENST00000544750 CORO2BQ9UQ03 480 aa10.89□□□□□ -0.67
USP28-212ENST00000544750 POFUT2Q9Y2G5 429 aa10.89□□□□□ -0.67
USP28-212ENST00000544750 TRAV36DV7A0A075B6V5 113 aa10.88□□□□□ -0.67
USP28-212ENST00000544750 A0A087WUJ7 227 aa10.88□□□□□ -0.67
USP28-212ENST00000544750 TMEM247A6NEH6 219 aa10.88□□□□□ -0.67
USP28-212ENST00000544750 CLDN25C9JDP6 229 aa10.88□□□□□ -0.67
USP28-212ENST00000544750 BGLAPP02818 100 aa10.88□□□□□ -0.67
USP28-212ENST00000544750 RNASE1P07998 156 aaKnown RBP10.88□□□□□ -0.67
USP28-212ENST00000544750 ETS2P15036 469 aa10.88□□□□□ -0.67
USP28-212ENST00000544750 CBLP22681 906 aa10.88□□□□□ -0.67
USP28-212ENST00000544750 ZFP36P26651 326 aaKnown RBP10.88□□□□□ -0.67
USP28-212ENST00000544750 HTR2AP28223 471 aa10.88□□□□□ -0.67
USP28-212ENST00000544750 GZMMP51124 257 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms