RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 UGT2A3Q6UWM9 527 aa8.46□□□□□ -1.06
YBX3-215ENST00000544504 CPOQ8IVL8 374 aa8.46□□□□□ -1.06
YBX3-215ENST00000544504 CCDC103Q8IW40 242 aa8.46□□□□□ -1.06
YBX3-215ENST00000544504 KDM8Q8N371 416 aa8.46□□□□□ -1.06
YBX3-215ENST00000544504 SLC37A3Q8NCC5 494 aa8.46□□□□□ -1.06
YBX3-215ENST00000544504 NPEPL1Q8NDH3 523 aa8.46□□□□□ -1.06
YBX3-215ENST00000544504 OR4K13Q8NH42 304 aa8.46□□□□□ -1.06
YBX3-215ENST00000544504 CNIH3Q8TBE1 160 aa8.46□□□□□ -1.06
YBX3-215ENST00000544504 IPCEF1Q8WWN9 437 aaPredicted RBP8.46□□□□□ -1.06
YBX3-215ENST00000544504 WNT2BQ93097 391 aa8.46□□□□□ -1.06
YBX3-215ENST00000544504 MYDGFQ969H8 173 aa8.46□□□□□ -1.06
YBX3-215ENST00000544504 TMEM45BQ96B21 275 aa8.46□□□□□ -1.06
YBX3-215ENST00000544504 OTULINQ96BN8 352 aa8.46□□□□□ -1.06
YBX3-215ENST00000544504 RASD2Q96D21 266 aa8.46□□□□□ -1.06
YBX3-215ENST00000544504 TM9SF2Q99805 663 aa8.46□□□□□ -1.06
YBX3-215ENST00000544504 TUBA1CQ9BQE3 449 aa8.46□□□□□ -1.06
YBX3-215ENST00000544504 BCO1Q9HAY6 547 aa8.46□□□□□ -1.06
YBX3-215ENST00000544504 B3GAT2Q9NPZ5 323 aa8.46□□□□□ -1.06
YBX3-215ENST00000544504 ASB6Q9NWX5 421 aa8.46□□□□□ -1.06
YBX3-215ENST00000544504 UBAP1Q9NZ09 502 aa8.46□□□□□ -1.06
YBX3-215ENST00000544504 CNOT2Q9NZN8 540 aaKnown RBP8.46□□□□□ -1.06
YBX3-215ENST00000544504 VSX1Q9NZR4 365 aaPredicted RBP8.46□□□□□ -1.06
YBX3-215ENST00000544504 PCDHGB1Q9Y5G3 927 aa8.46□□□□□ -1.06
YBX3-215ENST00000544504 FLVCR1Q9Y5Y0 555 aa8.46□□□□□ -1.06
YBX3-215ENST00000544504 FKBP7Q9Y680 259 aa8.46□□□□□ -1.06
YBX3-215ENST00000544504 POLEQ07864 2286 aa8.46□□□□□ -1.06
YBX3-215ENST00000544504 DNAJC13O75165 2243 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 ZNF407Q9C0G0 2248 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 IGHV3-15A0A0B4J1V0 119 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 MAGEA13PA6NCF6 341 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 ZNF716A6NP11 495 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 ZNF814B7Z6K7 855 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 SLC1A7O00341 560 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 ENTPD6O75354 484 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 SLC43A1O75387 559 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 WBP4O75554 376 aaKnown RBP8.45□□□□□ -1.06
YBX3-215ENST00000544504 YES1P07947 543 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 STSP08842 583 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 PIPP12273 146 aaPredicted RBP8.45□□□□□ -1.06
YBX3-215ENST00000544504 HLA-DOBP13765 273 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 COX6B1P14854 86 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 HOXB4P17483 251 aaPredicted RBP8.45□□□□□ -1.06
YBX3-215ENST00000544504 CRHBPP24387 322 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 HTR1FP30939 366 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 GUCA1AP43080 201 aaPredicted RBP8.45□□□□□ -1.06
YBX3-215ENST00000544504 MTNR1AP48039 350 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 TDGF1P3P51864 188 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 CLDN17P56750 224 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 CLRN1P58418 232 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 MESTQ5EB52 335 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 ZNF362Q5T0B9 420 aaPredicted RBP8.45□□□□□ -1.06
YBX3-215ENST00000544504 NSUN5P2Q63ZY6 315 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 NIPAL3Q6P499 406 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 PLBD1Q6P4A8 553 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 GFRALQ6UXV0 394 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 NHLRC1Q6VVB1 395 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 MEPCEQ7L2J0 689 aaKnown RBP8.45□□□□□ -1.06
YBX3-215ENST00000544504 ADGRE4PQ86SQ3 457 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 ZNF540Q8NDQ6 660 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 SDR9C7Q8NEX9 313 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 NOXO1Q8NFA2 376 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 BPIFB6Q8NFQ5 453 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 FNDC9Q8TBE3 224 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 FAM57AQ8TBR7 257 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 ROBO4Q8WZ75 1007 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 GMPPAQ96IJ6 420 aaPredicted RBP8.45□□□□□ -1.06
YBX3-215ENST00000544504 ZNF845Q96IR2 970 aaPredicted RBP8.45□□□□□ -1.06
YBX3-215ENST00000544504 ZNF582Q96NG8 517 aaPredicted RBP8.45□□□□□ -1.06
YBX3-215ENST00000544504 ZFP3Q96NJ6 502 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 NMNAT3Q96T66 252 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 NMNAT2Q9BZQ4 307 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 TP63Q9H3D4 680 aaPredicted RBP8.45□□□□□ -1.06
YBX3-215ENST00000544504 ZNF696Q9H7X3 374 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 HINT3Q9NQE9 182 aaKnown RBP8.45□□□□□ -1.06
YBX3-215ENST00000544504 MED29Q9NX70 200 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 HAO2Q9NYQ3 351 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 DNAJC27Q9NZQ0 273 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 KLHL13Q9P2N7 655 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 CLCF1Q9UBD9 225 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 GPR52Q9Y2T5 361 aa8.45□□□□□ -1.06
YBX3-215ENST00000544504 NOSIPQ9Y314 301 aaKnown RBP8.45□□□□□ -1.06
YBX3-215ENST00000544504 ANKHD1Q8IWZ3 2542 aaKnown RBP8.45□□□□□ -1.06
YBX3-215ENST00000544504 KIAA1549Q9HCM3 1950 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 SLC22A23A1A5C7 686 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 SLC35F4A4IF30 521 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 M0R129 80 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 MRPL33O75394 65 aaKnown RBP8.44□□□□□ -1.06
YBX3-215ENST00000544504 KHDRBS3O75525 346 aaKnown RBP8.44□□□□□ -1.06
YBX3-215ENST00000544504 TRMUO75648 421 aaKnown RBP8.44□□□□□ -1.06
YBX3-215ENST00000544504 GLCEO94923 617 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 SLC2A10O95528 541 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 FADS2O95864 444 aaKnown RBP8.44□□□□□ -1.06
YBX3-215ENST00000544504 CRHP06850 196 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 TPOP07202 933 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 PGA4P0DJD7 388 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 PGA3P0DJD8 388 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 SPI1P17947 270 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 EEF1B2P24534 225 aaKnown RBP8.44□□□□□ -1.06
YBX3-215ENST00000544504 SSTR2P30874 369 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 FMO3P31513 532 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms