RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	CDRT4	Q8N9R6	151 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	SLC16A11	Q8NCK7	471 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	TOR1AIP2	Q8NFQ8	470 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	OR5H6	Q8NGV6	325 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	OR2T29	Q8NH02	315 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	OR4C3	Q8NH37	302 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	FAM216A	Q8WUB2	273 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	GTF2H4	Q92759	462 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	STARD4	Q96DR4	205 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	FAM120B	Q96EK7	910 aa	Known RBP	5.7	□□□□□ -1.5
CIT-213	ENST00000543324	PPP3R2	Q96LZ3	170 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	SFXN2	Q96NB2	322 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	WWC2-AS2	Q96NR7	200 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	MS4A4E	Q96PG1	132 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	TSSK3	Q96PN8	268 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	ZBTB18	Q99592	522 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	NPAS1	Q99742	590 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	COQ7	Q99807	217 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	CPPED1	Q9BRF8	314 aa	Predicted RBP	5.7	□□□□□ -1.5
CIT-213	ENST00000543324	COPS4	Q9BT78	406 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	SRR	Q9GZT4	340 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	RIBC2	Q9H4K1	309 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	LIN7B	Q9HAP6	207 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	SMURF1	Q9HCE7	757 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324		Q9N2J8	555 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	DUSP22	Q9NRW4	184 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	PLSCR3	Q9NRY6	295 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	IL20	Q9NYY1	176 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	CNOT2	Q9NZN8	540 aa	Known RBP	5.7	□□□□□ -1.5
CIT-213	ENST00000543324	VAPA	Q9P0L0	249 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	PPP4R1L	Q9P1A2	415 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	DKKL1	Q9UK85	242 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	ZNF337	Q9Y3M9	751 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	OR10H1	Q9Y4A9	318 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	SPEF1	Q9Y4P9	236 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324		V9GYH0	126 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324		V9GYQ6	96 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	KIAA1109	Q2LD37	5005 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	FRAS1	Q86XX4	4008 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	HERC1	Q15751	4861 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324		A0A096LPI6	279 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324		A0A0A6YYJ9	748 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	SH3D21	A4FU49	640 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	SLC22A20	A6NK97	555 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	SNTN	A6NMZ2	147 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	LEUTX	A8MZ59	168 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	EEF1E1-BLOC1S5	C9J1V9	151 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	ADAMDEC1	O15204	470 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	EEF1E1	O43324	174 aa	Known RBP	5.69	□□□□□ -1.5
CIT-213	ENST00000543324	EMC8	O43402	210 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	SSX4	O60224	188 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	MITF	O75030	526 aa	Predicted RBP	5.69	□□□□□ -1.5
CIT-213	ENST00000543324	NOS1AP	O75052	506 aa	Predicted RBP	5.69	□□□□□ -1.5
CIT-213	ENST00000543324	NTN1	O95631	604 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	LGI1	O95970	557 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	SERPINA1	P01009	418 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	ADORA3	P0DMS8	318 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	CD8B	P10966	210 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	PRPS2	P11908	318 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	PIP	P12273	146 aa	Predicted RBP	5.69	□□□□□ -1.5
CIT-213	ENST00000543324	GABRB1	P18505	474 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	IL32	P24001	234 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	PTBP1	P26599	531 aa	Known RBP eCLIP	5.69	□□□□□ -1.5
CIT-213	ENST00000543324	TNFSF8	P32971	234 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	ASMT	P46597	345 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	RGS6	P49758	472 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	AGFG1	P52594	562 aa	Known RBP	5.69	□□□□□ -1.5
CIT-213	ENST00000543324	PSMD4	P55036	377 aa	Known RBP	5.69	□□□□□ -1.5
CIT-213	ENST00000543324	C17orf67	Q0P5P2	114 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	NPRL3	Q12980	569 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	PTGR1	Q14914	329 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	TOMM20	Q15388	145 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	ZNHIT3	Q15649	155 aa	Predicted RBP	5.69	□□□□□ -1.5
CIT-213	ENST00000543324	CD226	Q15762	336 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	ARMC4	Q5T2S8	1044 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	RNLS	Q5VYX0	342 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	OR4F3	Q6IEY1	312 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	OR2A2	Q6IF42	318 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	C11orf87	Q6NUJ2	197 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	FAM122C	Q6P4D5	195 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	VWA1	Q6PCB0	445 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	ZNF474	Q6S9Z5	364 aa	Predicted RBP	5.69	□□□□□ -1.5
CIT-213	ENST00000543324	AHSA2	Q719I0	299 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	MARCH3	Q86UD3	253 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	CADM2	Q8N3J6	435 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	GDPD1	Q8N9F7	314 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	FNDC5	Q8NAU1	212 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	OR4K17	Q8NGC6	315 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	OR10A6	Q8NH74	314 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	CDC26	Q8NHZ8	85 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	POC1B	Q8TC44	478 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	SFXN5	Q8TD22	340 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	DUSP19	Q8WTR2	217 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	TMEM171	Q8WVE6	324 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	DNAJA4	Q8WW22	397 aa	Predicted RBP	5.69	□□□□□ -1.5
CIT-213	ENST00000543324	GGH	Q92820	318 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	INTS12	Q96CB8	462 aa	Known RBP	5.69	□□□□□ -1.5
CIT-213	ENST00000543324	PPCDC	Q96CD2	204 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	COQ8B	Q96D53	544 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	TMEM80	Q96HE8	168 aa		5.69	□□□□□ -1.5

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