RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 C8orf82Q6P1X6 216 aaPredicted RBP4.57□□□□□ -1.68
CLIP1-217ENST00000543205 AAGABQ6PD74 315 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 CBLN3Q6UW01 205 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 ARSKQ6UWY0 536 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 ZNF836Q6ZNA1 936 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 PATL1Q86TB9 770 aaKnown RBP4.57□□□□□ -1.68
CLIP1-217ENST00000543205 ZNF440Q8IYI8 595 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 MICU2Q8IYU8 434 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 DEFB107AQ8IZN7 70 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 OR5W2Q8NH69 310 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 ZNF563Q8TA94 476 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 NEIL3Q8TAT5 605 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 SARAFQ96BY9 339 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 SFXN2Q96NB2 322 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 PIGQQ9BRB3 760 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 OR2B2Q9GZK3 357 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 SLC6A15Q9H2J7 730 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 EXOSC3Q9NQT5 275 aaKnown RBP4.57□□□□□ -1.68
CLIP1-217ENST00000543205 MED17Q9NVC6 651 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 TMEM181Q9P2C4 612 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 ABCD2Q9UBJ2 740 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 ICAM5Q9UMF0 924 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 VDAC3Q9Y277 283 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 SLC6A5Q9Y345 797 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 CMAHPQ9Y471 501 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 TLN1Q9Y490 2541 aaKnown RBP4.57□□□□□ -1.68
CLIP1-217ENST00000543205 DOPEY1Q5JWR5 2465 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 LOC100509620A0A075B734 347 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 SH3D21A4FU49 640 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 DBX1A6NMT0 343 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 B4DXG7 233 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 NPIPA2E9PIF3 369 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 NPIPA3F8WFD2 350 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 BCKDKO14874 412 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 ZIC3O60481 467 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 CTAG2O75638 210 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 WISP2O76076 250 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 ACTL6AO96019 429 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 OPN1SWP03999 348 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 RLN1P04808 185 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 LINGO3P0C6S8 592 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 T-ENOLP0DO92 83 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 GNLYP22749 145 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 RYKP34925 604 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 PTGS2P35354 604 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 EIF1P41567 113 aaKnown RBP4.56□□□□□ -1.68
CLIP1-217ENST00000543205 GSK3BP49841 420 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 COPZ1P61923 177 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 EEF1A1P68104 462 aaKnown RBP4.56□□□□□ -1.68
CLIP1-217ENST00000543205 ACSM1Q08AH1 577 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 MRPL49Q13405 166 aaKnown RBP4.56□□□□□ -1.68
CLIP1-217ENST00000543205 IL13RA2Q14627 380 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 QPRTQ15274 297 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 SAMD4BQ5PRF9 694 aaKnown RBP4.56□□□□□ -1.68
CLIP1-217ENST00000543205 FAM90A2PQ658T7 463 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 CCDC144NLQ6NUI1 221 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 TEX38Q6PEX7 206 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 PODNL1Q6PEZ8 512 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 DHRS4L2Q6PKH6 230 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 MOB3CQ70IA8 216 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 CCDC80Q76M96 950 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 ZNF550Q7Z398 422 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 CLIP4Q8N3C7 705 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 RNF148Q8N7C7 305 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 LINC00482Q8N8I6 264 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 SMYD1Q8NB12 490 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 OR5M1Q8NGP8 315 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 GPR119Q8TDV5 335 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 RASSF5Q8WWW0 418 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 TMEM234Q8WY98 164 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 FIG4Q92562 907 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 ABTB1Q969K4 478 aaPredicted RBP4.56□□□□□ -1.68
CLIP1-217ENST00000543205 ARSGQ96EG1 525 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 ASCL2Q99929 193 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 PINK1Q9BXM7 581 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 RANGRFQ9HD47 186 aaPredicted RBP4.56□□□□□ -1.68
CLIP1-217ENST00000543205 PNPLA3Q9NST1 481 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 KLHL28Q9NXS3 571 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 VSX1Q9NZR4 365 aaPredicted RBP4.56□□□□□ -1.68
CLIP1-217ENST00000543205 DOPEY2Q9Y3R5 2298 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 UBR5O95071 2799 aaPredicted RBP4.56□□□□□ -1.68
CLIP1-217ENST00000543205 EXPH5Q8NEV8 1989 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 A0A0B4J293 547 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 CXCR6O00574 342 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 PRRG2O14669 202 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 GYG2O15488 501 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 ZNHIT1O43257 154 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 SLC19A2O60779 497 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 BCAS1O75363 584 aaPredicted RBP4.56□□□□□ -1.68
CLIP1-217ENST00000543205 ATP5HO75947 161 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 MFN2O95140 757 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 GKN3PP0CG01 181 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 GP1BBP13224 206 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 ZNF17P17021 662 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 BMP7P18075 431 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 TCN1P20061 433 aaPredicted RBP4.56□□□□□ -1.68
CLIP1-217ENST00000543205 ME2P23368 584 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 UQCRC1P31930 480 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 PCP4P48539 62 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 IDH2P48735 452 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms