RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 SPATA2Q9UM82 520 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 ERVW-1Q9UQF0 538 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 KCNIP3Q9Y2W7 256 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 MUC3AQ02505 3323 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 RGPD2P0DJD1 1756 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 RBBP6Q7Z6E9 1792 aaKnown RBP3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 ARFGEF2Q9Y6D5 1785 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 BDP1A6H8Y1 2624 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 AFDNP55196 1824 aaKnown RBP3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 MYH7P12883 1935 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 IGHV4-30-2A0A087WSY4 118 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 KBTBD11-OT1A0A1B0GTJ5 212 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 A0A1B0GUH1 482 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 GMNCA6NCL1 334 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 CCT8L1PA6NM43 557 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 FAM72CH0Y354 149 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 K7ERQ8 282 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 BMPR1BO00238 502 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 NTN3O00634 580 aaPredicted RBP3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 HSD17B6O14756 317 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 TRAPPC3O43617 180 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 NMT2O60551 498 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 SH3BGRLO75368 114 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 SERPINB7O75635 380 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 C1orf105O95561 183 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 OXSR1O95747 527 aaPredicted RBP3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 GNA14O95837 355 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 HCKP08631 526 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 PAEPP09466 180 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 GOLGA8HP0CJ92 632 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 UMPSP11172 480 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 GATA1P15976 413 aaPredicted RBP3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 PRKACBP22694 351 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 DCKP27707 260 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 CASP1P29466 404 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 CCKARP32238 428 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 ELK3P41970 407 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 CSRP3P50461 194 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 TMEM50BP56557 158 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 STX17P56962 302 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 NCALDP61601 193 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 HPCAP84074 193 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 XIAPP98170 497 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 CKAP4Q07065 602 aaKnown RBP3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 ZFP36L1Q07352 338 aaKnown RBP3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 FHL1Q13642 323 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 UAP1Q16222 522 aaPredicted RBP3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 DGUOKQ16854 277 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 ZNF829Q3KNS6 432 aaPredicted RBP3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 KRT71Q3SY84 523 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 MOGAT2Q3SYC2 334 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 ZNF585BQ52M93 769 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 CARD16Q5EG05 197 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 LY6G6FQ5SQ64 297 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 STPG1Q5TH74 334 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 FAM72AQ5TYM5 149 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 C22orf42Q6IC83 251 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 OR52W1Q6IF63 320 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 FAM72DQ6L9T8 149 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 ZNF530Q6P9A1 599 aaPredicted RBP3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 TTC23LQ6PF05 361 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 WDR59Q6PJI9 974 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 CCDC137Q6PK04 289 aaKnown RBP3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 SCARA5Q6ZMJ2 495 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 PGAP1Q75T13 922 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 FAM72BQ86X60 149 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 VRK2Q86Y07 508 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 MREGQ8N565 214 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 OR9G4Q8NGQ1 327 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 ZPLD1Q8TCW7 415 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 LKAAEAR1Q8TD35 194 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 ADAMTS16Q8TE57 1224 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 TAF15Q92804 592 aaKnown RBP eCLIP3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 TOP1MTQ969P6 601 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 DCPSQ96C86 337 aaKnown RBP3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 C8orf44Q96CB5 159 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 MSANTD3Q96H12 275 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 ANKRD36BP1Q96IX9 119 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 SYT15Q9BQS2 421 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 TIPINQ9BVW5 301 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 TM2D1Q9BX74 207 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 HCAR1Q9BXC0 346 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 OCR1Q9BZK8 76 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 BOLA2Q9H3K6 86 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 SYNDIG1Q9H7V2 258 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 ZNF556Q9HAH1 456 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 PNO1Q9NRX1 252 aaKnown RBP3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 FAIMQ9NVQ4 179 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 RHBDL2Q9NX52 303 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 ADAM22Q9P0K1 906 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 THAP10Q9P2Z0 257 aaPredicted RBP3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 CLN8Q9UBY8 286 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 WARS2Q9UGM6 360 aaKnown RBP3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 GUCA1BQ9UMX6 200 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 SAMD4AQ9UPU9 718 aaKnown RBP3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 MRPS28Q9Y2Q9 187 aaKnown RBP3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 SAR1BQ9Y6B6 198 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 ANKRD31Q8N7Z5 1873 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 CACNA1FO60840 1977 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 SLX4Q8IY92 1834 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms