RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 MALT1Q9UDY8 824 aa20.42■□□□□ 0.86
HOMER3-205ENST00000542541 UPK3AO75631 287 aa20.41■□□□□ 0.86
HOMER3-205ENST00000542541 IGHV3-9P01782 118 aa20.41■□□□□ 0.86
HOMER3-205ENST00000542541 AGAP20933 346 aa20.41■□□□□ 0.86
HOMER3-205ENST00000542541 PCYT1AP49585 367 aa20.41■□□□□ 0.86
HOMER3-205ENST00000542541 SLC25A35Q3KQZ1 300 aa20.41■□□□□ 0.86
HOMER3-205ENST00000542541 DEPDC4Q8N2C3 294 aa20.41■□□□□ 0.86
HOMER3-205ENST00000542541 SLC37A3Q8NCC5 494 aa20.41■□□□□ 0.86
HOMER3-205ENST00000542541 NPEPL1Q8NDH3 523 aa20.41■□□□□ 0.86
HOMER3-205ENST00000542541 TRUB1Q8WWH5 349 aaKnown RBP20.41■□□□□ 0.86
HOMER3-205ENST00000542541 APOL4Q9BPW4 351 aa20.41■□□□□ 0.86
HOMER3-205ENST00000542541 ULBP2Q9BZM5 246 aa20.41■□□□□ 0.86
HOMER3-205ENST00000542541 PRSS50Q9UI38 385 aa20.41■□□□□ 0.86
HOMER3-205ENST00000542541 EEF1E1-BLOC1S5C9J1V9 151 aa20.4■□□□□ 0.86
HOMER3-205ENST00000542541 ZNF587BE7ETH6 402 aa20.4■□□□□ 0.86
HOMER3-205ENST00000542541 H7C1C5 153 aa20.4■□□□□ 0.86
HOMER3-205ENST00000542541 EEF1E1O43324 174 aaKnown RBP20.4■□□□□ 0.86
HOMER3-205ENST00000542541 SLC2A10O95528 541 aa20.4■□□□□ 0.86
HOMER3-205ENST00000542541 QDPRP09417 244 aa20.4■□□□□ 0.86
HOMER3-205ENST00000542541 EDNRAP25101 427 aa20.4■□□□□ 0.86
HOMER3-205ENST00000542541 CAPGP40121 348 aa20.4■□□□□ 0.86
HOMER3-205ENST00000542541 LCN6P62502 163 aa20.4■□□□□ 0.86
HOMER3-205ENST00000542541 ADARB1P78563 741 aaKnown RBP20.4■□□□□ 0.86
HOMER3-205ENST00000542541 XKRXQ6PP77 449 aa20.4■□□□□ 0.86
HOMER3-205ENST00000542541 Q6ZT83 130 aa20.4■□□□□ 0.86
HOMER3-205ENST00000542541 LIX1LQ8IVB5 337 aa20.4■□□□□ 0.86
HOMER3-205ENST00000542541 LILRB4Q8NHJ6 448 aa20.4■□□□□ 0.86
HOMER3-205ENST00000542541 FAM81AQ8TBF8 368 aa20.4■□□□□ 0.86
HOMER3-205ENST00000542541 CA5BP1Q8WTZ4 195 aa20.4■□□□□ 0.86
HOMER3-205ENST00000542541 MCHR2Q969V1 340 aa20.4■□□□□ 0.86
HOMER3-205ENST00000542541 OPN3Q9H1Y3 402 aaPredicted RBP20.4■□□□□ 0.86
HOMER3-205ENST00000542541 SYT4Q9H2B2 425 aa20.4■□□□□ 0.86
HOMER3-205ENST00000542541 FN3KQ9H479 309 aa20.4■□□□□ 0.86
HOMER3-205ENST00000542541 ALPK2Q86TB3 2170 aa20.4■□□□□ 0.86
HOMER3-205ENST00000542541 PLA2G2AP14555 144 aa20.39■□□□□ 0.86
HOMER3-205ENST00000542541 CRABP1P29762 137 aa20.39■□□□□ 0.86
HOMER3-205ENST00000542541 FAPQ12884 760 aa20.39■□□□□ 0.86
HOMER3-205ENST00000542541 IL18R1Q13478 541 aa20.39■□□□□ 0.86
HOMER3-205ENST00000542541 CRMP1Q14194 572 aa20.39■□□□□ 0.86
HOMER3-205ENST00000542541 LRFN4Q6PJG9 635 aa20.39■□□□□ 0.86
HOMER3-205ENST00000542541 DNM1P34Q6PK57 102 aa20.39■□□□□ 0.86
HOMER3-205ENST00000542541 OR8J1Q8NGP2 316 aa20.39■□□□□ 0.86
HOMER3-205ENST00000542541 TFAP2CQ92754 450 aa20.39■□□□□ 0.86
HOMER3-205ENST00000542541 DDOQ99489 341 aa20.39■□□□□ 0.86
HOMER3-205ENST00000542541 OR6C68A6NDL8 312 aa20.38■□□□□ 0.85
HOMER3-205ENST00000542541 A8MXE2 369 aa20.38■□□□□ 0.85
HOMER3-205ENST00000542541 PRR23D1E9PI22 279 aaPredicted RBP20.38■□□□□ 0.85
HOMER3-205ENST00000542541 RPL36A-HNRNPH2H7BZ11 118 aa20.38■□□□□ 0.85
HOMER3-205ENST00000542541 J3QKU1 62 aa20.38■□□□□ 0.85
HOMER3-205ENST00000542541 PRR23D2P0DMB1 279 aaPredicted RBP20.38■□□□□ 0.85
HOMER3-205ENST00000542541 ROR2Q01974 943 aaKnown RBP20.38■□□□□ 0.85
HOMER3-205ENST00000542541 LGALS3BPQ08380 585 aa20.38■□□□□ 0.85
HOMER3-205ENST00000542541 STK11Q15831 433 aa20.38■□□□□ 0.85
HOMER3-205ENST00000542541 LUZP2Q86TE4 346 aa20.38■□□□□ 0.85
HOMER3-205ENST00000542541 CYB561A3Q8NBI2 242 aa20.38■□□□□ 0.85
HOMER3-205ENST00000542541 RELL2Q8NC24 303 aaPredicted RBP20.38■□□□□ 0.85
HOMER3-205ENST00000542541 NMD3Q96D46 503 aaKnown RBP20.38■□□□□ 0.85
HOMER3-205ENST00000542541 ALKBH3Q96Q83 286 aaPredicted RBP20.38■□□□□ 0.85
HOMER3-205ENST00000542541 CRLF2Q9HC73 371 aa20.38■□□□□ 0.85
HOMER3-205ENST00000542541 GPR35Q9HC97 309 aa20.38■□□□□ 0.85
HOMER3-205ENST00000542541 RPRD1BQ9NQG5 326 aaKnown RBP20.38■□□□□ 0.85
HOMER3-205ENST00000542541 JKAMPQ9P055 326 aa20.38■□□□□ 0.85
HOMER3-205ENST00000542541 TLX2O43763 284 aaPredicted RBP20.38■□□□□ 0.85
HOMER3-205ENST00000542541 MPZL2O60487 215 aa20.38■□□□□ 0.85
HOMER3-205ENST00000542541 ZNF133P52736 654 aaPredicted RBP20.38■□□□□ 0.85
HOMER3-205ENST00000542541 EFNB1P98172 346 aa20.38■□□□□ 0.85
HOMER3-205ENST00000542541 P2RY6Q15077 328 aa20.38■□□□□ 0.85
HOMER3-205ENST00000542541 PHYHD1Q5SRE7 291 aa20.38■□□□□ 0.85
HOMER3-205ENST00000542541 ZNF808Q8N4W9 903 aaPredicted RBP20.38■□□□□ 0.85
HOMER3-205ENST00000542541 TCEANCQ8N8B7 351 aa20.38■□□□□ 0.85
HOMER3-205ENST00000542541 SETD9Q8NE22 299 aa20.38■□□□□ 0.85
HOMER3-205ENST00000542541 OR2T4Q8NH00 348 aa20.38■□□□□ 0.85
HOMER3-205ENST00000542541 TMEM163Q8TC26 289 aa20.38■□□□□ 0.85
HOMER3-205ENST00000542541 ZNF184Q99676 751 aaPredicted RBP20.38■□□□□ 0.85
HOMER3-205ENST00000542541 NUAK2Q9H093 628 aa20.38■□□□□ 0.85
HOMER3-205ENST00000542541 GPR52Q9Y2T5 361 aa20.38■□□□□ 0.85
HOMER3-205ENST00000542541 FKBP7Q9Y680 259 aa20.38■□□□□ 0.85
HOMER3-205ENST00000542541 UBR5O95071 2799 aaPredicted RBP20.37■□□□□ 0.85
HOMER3-205ENST00000542541 INTS1Q8N201 2190 aaKnown RBP20.37■□□□□ 0.85
HOMER3-205ENST00000542541 DHHO43323 396 aa20.37■□□□□ 0.85
HOMER3-205ENST00000542541 PRKYO43930 277 aa20.37■□□□□ 0.85
HOMER3-205ENST00000542541 SLC16A7O60669 478 aa20.37■□□□□ 0.85
HOMER3-205ENST00000542541 ZG16O60844 167 aa20.37■□□□□ 0.85
HOMER3-205ENST00000542541 MPGP29372 298 aa20.37■□□□□ 0.85
HOMER3-205ENST00000542541 ZNF84P51523 738 aa20.37■□□□□ 0.85
HOMER3-205ENST00000542541 SLC25A1P53007 311 aa20.37■□□□□ 0.85
HOMER3-205ENST00000542541 TGFBR3Q03167 851 aa20.37■□□□□ 0.85
HOMER3-205ENST00000542541 C10orf128Q5T292 105 aa20.37■□□□□ 0.85
HOMER3-205ENST00000542541 CPOQ8IVL8 374 aa20.37■□□□□ 0.85
HOMER3-205ENST00000542541 OTULINQ96BN8 352 aa20.37■□□□□ 0.85
HOMER3-205ENST00000542541 LRRC46Q96FV0 321 aa20.37■□□□□ 0.85
HOMER3-205ENST00000542541 IL4I1Q96RQ9 567 aa20.37■□□□□ 0.85
HOMER3-205ENST00000542541 RBM24Q9BX46 236 aaKnown RBP20.37■□□□□ 0.85
HOMER3-205ENST00000542541 SRA1Q9HD15 236 aaKnown RBP20.37■□□□□ 0.85
HOMER3-205ENST00000542541 ELOVL5Q9NYP7 299 aa20.37■□□□□ 0.85
HOMER3-205ENST00000542541 PYCARD-AS1I3L0S3 204 aa20.36■□□□□ 0.85
HOMER3-205ENST00000542541 KHDRBS3O75525 346 aaKnown RBP20.36■□□□□ 0.85
HOMER3-205ENST00000542541 GUCA1AP43080 201 aaPredicted RBP20.36■□□□□ 0.85
HOMER3-205ENST00000542541 FMODQ06828 376 aa20.36■□□□□ 0.85
HOMER3-205ENST00000542541 CEACAM16Q2WEN9 425 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms