RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 RD3Q7Z3Z2 195 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 GDF7Q7Z4P5 450 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 TMED4Q7Z7H5 227 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 XYLT1Q86Y38 959 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 DENND1CQ8IV53 801 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 NRMQ8IXM6 262 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 FAM58AQ8N1B3 248 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 GABRG1Q8N1C3 465 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 GTPBP8Q8N3Z3 284 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-219ENST00000542112 JAGN1Q8N5M9 183 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 C12orf76Q8N812 135 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-219ENST00000542112 EXD3Q8N9H8 876 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 OR4K5Q8NGD3 323 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 OR1J2Q8NGS2 313 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 OR2T29Q8NH02 315 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 OR4S2Q8NH73 311 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 SLC7A13Q8TCU3 470 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 FAM222BQ8WU58 562 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 APH1BQ8WW43 257 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 PHYHIPQ92561 330 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 FAM168AQ92567 244 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 DNASE1L2Q92874 299 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 SPSB1Q96BD6 273 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 RPUSD4Q96CM3 377 aaKnown RBP3.96□□□□□ -1.78
SNHG1-219ENST00000542112 PYURFQ96I23 114 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 PPP1R16AQ96I34 528 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 CPB2Q96IY4 423 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 OR8B4Q96RC9 309 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 COPS8Q99627 209 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 TMEM47Q9BQJ4 181 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 MIEN1Q9BRT3 115 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 NAA11Q9BSU3 229 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-219ENST00000542112 LRFN3Q9BTN0 628 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 TRMT61BQ9BVS5 477 aaKnown RBP3.96□□□□□ -1.78
SNHG1-219ENST00000542112 ULBP1Q9BZM6 244 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 RAB33BQ9H082 229 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 MAGT1Q9H0U3 335 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 C20orf85Q9H1P6 137 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 RGCCQ9H4X1 137 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 ACTL8Q9H568 366 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 PLEKHA1Q9HB21 404 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 TMEM27Q9HBJ8 222 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 HHATLQ9HCP6 504 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 ACKR4Q9NPB9 350 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 SLC52A3Q9NQ40 469 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 SERHLQ9NQF3 203 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-219ENST00000542112 CENPMQ9NSP4 180 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 C2orf42Q9NWW7 574 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 TXNL4BQ9NX01 149 aaKnown RBP3.96□□□□□ -1.78
SNHG1-219ENST00000542112 TAS2R13Q9NYV9 303 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 COMMD3Q9UBI1 195 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 COPS7AQ9UBW8 275 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 ZNF70Q9UC06 446 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-219ENST00000542112 FTSJ1Q9UET6 329 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 CHRNA9Q9UGM1 479 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 TRMT112Q9UI30 125 aaKnown RBP3.96□□□□□ -1.78
SNHG1-219ENST00000542112 PRSS50Q9UI38 385 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 KCNE5Q9UJ90 142 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 KCNG2Q9UJ96 466 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 SLC13A4Q9UKG4 626 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 CNTN6Q9UQ52 1028 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 EXO1Q9UQ84 846 aaKnown RBP3.96□□□□□ -1.78
SNHG1-219ENST00000542112 PPP1R3CQ9UQK1 317 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 CAMK2AQ9UQM7 478 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 NIP7Q9Y221 180 aaKnown RBP eCLIP3.96□□□□□ -1.784e-44■■■■■ 26.8
SNHG1-219ENST00000542112 LSM2Q9Y333 95 aaKnown RBP3.96□□□□□ -1.78
SNHG1-219ENST00000542112 RPL36Q9Y3U8 105 aaKnown RBP3.96□□□□□ -1.78
SNHG1-219ENST00000542112 INSL6Q9Y581 213 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 NME7Q9Y5B8 376 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 GREB1LQ9C091 1923 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-219ENST00000542112 IGHV2-70DA0A0C4DH43 119 aa3.95□□□□□ -1.78
SNHG1-219ENST00000542112 A0A1W2PPE3 182 aa3.95□□□□□ -1.78
SNHG1-219ENST00000542112 TMEM129A0AVI4 362 aa3.95□□□□□ -1.78
SNHG1-219ENST00000542112 ELOVL7A1L3X0 281 aa3.95□□□□□ -1.78
SNHG1-219ENST00000542112 C2orf78A6NCI8 922 aa3.95□□□□□ -1.78
SNHG1-219ENST00000542112 ZNF503-AS2A6NEH8 195 aa3.95□□□□□ -1.78
SNHG1-219ENST00000542112 PGPEP1LA6NFU8 196 aa3.95□□□□□ -1.78
SNHG1-219ENST00000542112 IFITM10A6NMD0 228 aa3.95□□□□□ -1.78
SNHG1-219ENST00000542112 GABRR3A8MPY1 467 aa3.95□□□□□ -1.78
SNHG1-219ENST00000542112 F6UZH7 168 aa3.95□□□□□ -1.78
SNHG1-219ENST00000542112 TRAPPC2LH3BP13 241 aa3.95□□□□□ -1.78
SNHG1-219ENST00000542112 ZNF593O00488 134 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-219ENST00000542112 FAAHO00519 579 aa3.95□□□□□ -1.78
SNHG1-219ENST00000542112 PIP5K1BO14986 540 aa3.95□□□□□ -1.78
SNHG1-219ENST00000542112 ENTPD6O75354 484 aa3.95□□□□□ -1.78
SNHG1-219ENST00000542112 MTX2O75431 263 aa3.95□□□□□ -1.78
SNHG1-219ENST00000542112 PRDM1O75626 825 aa3.95□□□□□ -1.78
SNHG1-219ENST00000542112 ADAP1O75689 374 aa3.95□□□□□ -1.78
SNHG1-219ENST00000542112 CD8AP01732 235 aa3.95□□□□□ -1.78
SNHG1-219ENST00000542112 PMP2P02689 132 aa3.95□□□□□ -1.78
SNHG1-219ENST00000542112 THY1P04216 161 aa3.95□□□□□ -1.78
SNHG1-219ENST00000542112 SEMG1P04279 462 aa3.95□□□□□ -1.78
SNHG1-219ENST00000542112 HLA-DPB1P04440 258 aa3.95□□□□□ -1.78
SNHG1-219ENST00000542112 ALPIP09923 528 aa3.95□□□□□ -1.78
SNHG1-219ENST00000542112 OR10J4P0C629 311 aa3.95□□□□□ -1.78
SNHG1-219ENST00000542112 TMEM225BP0DP42 221 aa3.95□□□□□ -1.78
SNHG1-219ENST00000542112 CALCBP10092 127 aa3.95□□□□□ -1.78
SNHG1-219ENST00000542112 GZMBP10144 247 aa3.95□□□□□ -1.78
SNHG1-219ENST00000542112 TDGF1P13385 188 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms