RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 SYNJ2O15056 1496 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 ABCC10Q5T3U5 1492 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 NEO1Q92859 1461 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 TUBGCP6Q96RT7 1819 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 IQGAP1P46940 1657 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 SHPRHQ149N8 1683 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 ANKARQ7Z5J8 1434 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 LOC105371242A0A075B767 164 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 A0A087WXM4 84 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 IGKV3D-20A0A0C4DH25 116 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 A0A0G2JMP0 313 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 IQCMA0A1B0GVH7 501 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 MEX3AA1L020 520 aaKnown RBP2.69□□□□□ -1.98
USP28-210ENST00000542033 ASB14A6NK59 587 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 SHISA7A6NL88 538 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 PDZK1P1A8MUH7 402 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 TRDCB7Z8K6 153 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 TMEM238C9JI98 176 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 NEDD8-MDP1E9PL57 170 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 I3L521 148 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 STX7O15400 261 aaKnown RBP2.69□□□□□ -1.98
USP28-210ENST00000542033 RGS5O15539 181 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 COCHO43405 550 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 FADS1O60427 444 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 SDC3O75056 442 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 MTX2O75431 263 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 UGT2B17O75795 530 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 GATBO75879 557 aaKnown RBP2.69□□□□□ -1.98
USP28-210ENST00000542033 OR4F21O95013 312 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 H6PDO95479 791 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 TDP2O95551 362 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 HOXC4P09017 264 aaPredicted RBP2.69□□□□□ -1.98
USP28-210ENST00000542033 ZNF806P0C7X5 589 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 SLC35E2BP0CK96 405 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 SLC35E2P0CK97 266 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 OR8G3PP0DMU2 310 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 IL7P13232 177 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 CD1EP15812 388 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 C4BPBP20851 252 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 PTNP21246 168 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 DRD5P21918 477 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 GCAP28676 217 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 OR1E1P30953 314 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 ARR3P36575 388 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 TGFBR2P37173 567 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 HPCAL1P37235 193 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 SLC1A2P43004 574 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 PTGFRP43088 359 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 RPS5P46782 204 aaKnown RBP2.69□□□□□ -1.98
USP28-210ENST00000542033 TGM4P49221 684 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 CDC34P49427 236 aaPredicted RBP2.69□□□□□ -1.98
USP28-210ENST00000542033 RBP2P50120 134 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 METAP1P53582 386 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 UGT2B15P54855 530 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 BACE1P56817 501 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 ACTBP60709 375 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 RAP1BP61224 184 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 PSME3P61289 254 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 MAGOHP61326 146 aaKnown RBP2.69□□□□□ -1.98
USP28-210ENST00000542033 ACTA2P62736 377 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 HERVK_113P63132 956 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 ACTG1P63261 375 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 ACTG2P63267 376 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 ACTC1P68032 377 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 ACTA1P68133 377 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 ZNF45Q02386 682 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 RGS1Q08116 209 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 FGL1Q08830 312 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 INCA1Q0VD86 236 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 ELAVL2Q12926 359 aaKnown RBP2.69□□□□□ -1.98
USP28-210ENST00000542033 GPR176Q14439 515 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 KCNJ11Q14654 390 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 SLC1A5Q15758 541 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 GRK1Q15835 563 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 FAM189A2Q15884 450 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 MICAQ29983 383 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 DCAF4L1Q3SXM0 396 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 ACSF3Q4G176 576 aaPredicted RBP2.69□□□□□ -1.98
USP28-210ENST00000542033 PAN3Q58A45 887 aaKnown RBP2.69□□□□□ -1.98
USP28-210ENST00000542033 RNASE10Q5GAN6 216 aaKnown RBP2.69□□□□□ -1.98
USP28-210ENST00000542033 PABPC1L2AQ5JQF8 200 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 CLLU1Q5K131 121 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 RABGAP1LQ5R372 815 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 NCR3LG1Q68D85 454 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 NIPAL3Q6P499 406 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 DCUN1D2Q6PH85 259 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 SCARA5Q6ZMJ2 495 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 Q6ZRG5 221 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 SLC16A14Q7RTX9 510 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 DHDDSQ86SQ9 333 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 ZDHHC21Q8IVQ6 265 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 TCTE3Q8IZS6 198 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 C4orf33Q8N1A6 199 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 GPR137CQ8N3F9 429 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 COMMD1Q8N668 190 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 AQP11Q8NBQ7 271 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 CCDC54Q8NEL0 328 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 BPIFCQ8NFQ6 507 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 STEAP2Q8NFT2 490 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 OR2T3Q8NH03 318 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms