RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 EMC6Q9BV81 110 aa15.45■□□□□ 0.06
CLSTN3-210ENST00000540931 TSSK6Q9BXA6 273 aa15.45■□□□□ 0.06
CLSTN3-210ENST00000540931 ZNF226Q9NYT6 803 aa15.45■□□□□ 0.06
CLSTN3-210ENST00000540931 USE1Q9NZ43 259 aa15.45■□□□□ 0.06
CLSTN3-210ENST00000540931 IER3IP1Q9Y5U9 82 aa15.45■□□□□ 0.06
CLSTN3-210ENST00000540931 CRYBG3Q68DQ2 2970 aa15.45■□□□□ 0.06
CLSTN3-210ENST00000540931 PRSS37A4D1T9 235 aa15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 TUBAL3A6NHL2 446 aa15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 ZNF99A8MXY4 864 aaPredicted RBP15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 PDLIM1O00151 329 aa15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 TRMUO75648 421 aaKnown RBP15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 FARS2O95363 451 aaKnown RBP15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 WNT11O96014 354 aa15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 ANPEPP15144 967 aa15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 NPR2P20594 1047 aa15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 PRKACGP22612 351 aa15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 GIPRP48546 466 aa15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 PPP2R2BQ00005 443 aa15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 MYBPC1Q00872 1141 aa15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 ROR2Q01974 943 aaKnown RBP15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 CD47Q08722 323 aa15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 TOP3AQ13472 1001 aaPredicted RBP15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 KRR1Q13601 381 aaKnown RBP15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 RCN1Q15293 331 aa15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 TIMM23BQ5SRD1 257 aa15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 C10orf128Q5T292 105 aa15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 ANKRD16Q6P6B7 361 aa15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 KLHL24Q6TFL4 600 aa15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 STAC2Q6ZMT1 411 aa15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 ZBTB49Q6ZSB9 765 aa15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 ZNF627Q7L945 461 aa15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 BHLHA15Q7RTS1 189 aaPredicted RBP15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 PACRGLQ8N7B6 248 aa15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 ZNF433Q8N7K0 673 aaPredicted RBP15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 DACH2Q96NX9 599 aa15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 MUS81Q96NY9 551 aa15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 CRLF2Q9HC73 371 aa15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 GPR35Q9HC97 309 aa15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 PRSS50Q9UI38 385 aa15.44■□□□□ 0.06
CLSTN3-210ENST00000540931 RIIAD1A6NNX1 92 aa15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 ANKRD65E5RJM6 399 aa15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 BHLHE40O14503 412 aa15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 CASKO14936 926 aa15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 ARHGEF9O43307 516 aa15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 DHHO43323 396 aa15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 CLDN1O95832 211 aa15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 PAICSP22234 425 aaKnown RBP15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 NTF4P34130 210 aa15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 GRK5P34947 590 aa15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 DAPP51397 102 aa15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 BLVRAP53004 296 aa15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 CRISP1P54107 249 aa15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 FXYD6P3P58550 94 aa15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 DAG1Q14118 895 aa15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 MELKQ14680 651 aa15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 SLC36A3Q495N2 470 aa15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 THSD4Q6ZMP0 1018 aa15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 CXorf67Q86X51 503 aaPredicted RBP15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 MEX3DQ86XN8 651 aaKnown RBP15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 FAM222BQ8WU58 562 aa15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 NANOS1Q8WY41 292 aaKnown RBP15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 SLC38A2Q96QD8 506 aa15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 KCNN2Q9H2S1 579 aa15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 VCX3BQ9H321 246 aa15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 EGLN3Q9H6Z9 239 aa15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 VSX1Q9NZR4 365 aaPredicted RBP15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 REV1Q9UBZ9 1251 aa15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 FBXL3Q9UKT7 428 aa15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 AMDHD2Q9Y303 409 aa15.43■□□□□ 0.06
CLSTN3-210ENST00000540931 TEX13CA0A0J9YWL9 993 aa15.42■□□□□ 0.06
CLSTN3-210ENST00000540931 SAC3D1A6NKF1 404 aa15.42■□□□□ 0.06
CLSTN3-210ENST00000540931 UPK3AO75631 287 aa15.42■□□□□ 0.06
CLSTN3-210ENST00000540931 QDPRP09417 244 aa15.42■□□□□ 0.06
CLSTN3-210ENST00000540931 ZNF3P17036 446 aa15.42■□□□□ 0.06
CLSTN3-210ENST00000540931 IGHV1-2P23083 117 aa15.42■□□□□ 0.06
CLSTN3-210ENST00000540931 KIR2DL3P43628 341 aa15.42■□□□□ 0.06
CLSTN3-210ENST00000540931 FAM27E3Q08E93 113 aa15.42■□□□□ 0.06
CLSTN3-210ENST00000540931 RIPK1Q13546 671 aa15.42■□□□□ 0.06
CLSTN3-210ENST00000540931 CARD17Q5XLA6 110 aa15.42■□□□□ 0.06
CLSTN3-210ENST00000540931 IGFN1Q86VF2 1251 aa15.42■□□□□ 0.06
CLSTN3-210ENST00000540931 DMRTC2Q8IXT2 367 aaPredicted RBP15.42■□□□□ 0.06
CLSTN3-210ENST00000540931 HS3ST5Q8IZT8 346 aa15.42■□□□□ 0.06
CLSTN3-210ENST00000540931 MCHR2Q969V1 340 aa15.42■□□□□ 0.06
CLSTN3-210ENST00000540931 PLEKHA8Q96JA3 519 aa15.42■□□□□ 0.06
CLSTN3-210ENST00000540931 Q96M85 177 aa15.42■□□□□ 0.06
CLSTN3-210ENST00000540931 ALKBH3Q96Q83 286 aaPredicted RBP15.42■□□□□ 0.06
CLSTN3-210ENST00000540931 CIB1Q99828 191 aa15.42■□□□□ 0.06
CLSTN3-210ENST00000540931 MED18Q9BUE0 208 aa15.42■□□□□ 0.06
CLSTN3-210ENST00000540931 SLC25A19Q9HC21 320 aa15.42■□□□□ 0.06
CLSTN3-210ENST00000540931 KCNN3Q9UGI6 736 aa15.42■□□□□ 0.06
CLSTN3-210ENST00000540931 ADAM18Q9Y3Q7 739 aa15.42■□□□□ 0.06
CLSTN3-210ENST00000540931 ANKRD17O75179 2603 aaKnown RBP15.41■□□□□ 0.06
CLSTN3-210ENST00000540931 PPP1R3DO95685 299 aa15.41■□□□□ 0.06
CLSTN3-210ENST00000540931 IGHV3-9P01782 118 aa15.41■□□□□ 0.06
CLSTN3-210ENST00000540931 ALPLP05186 524 aa15.41■□□□□ 0.06
CLSTN3-210ENST00000540931 ZNF26P17031 533 aaPredicted RBP15.41■□□□□ 0.06
CLSTN3-210ENST00000540931 IGFBP2P18065 325 aa15.41■□□□□ 0.06
CLSTN3-210ENST00000540931 POU1F1P28069 291 aa15.41■□□□□ 0.06
CLSTN3-210ENST00000540931 UBE2NP61088 152 aaKnown RBP15.41■□□□□ 0.06
CLSTN3-210ENST00000540931 CDK5Q00535 292 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms