RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 RRM2BQ7LG56 351 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 PIWIL3Q7Z3Z3 882 aaKnown RBP14.69□□□□□ -0.06
CD9-209ENST00000540891 DTX2Q86UW9 622 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 TGIF2LYQ8IUE0 185 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 ZDHHC21Q8IVQ6 265 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 CCDC36Q8IYA8 594 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 CDK20Q8IZL9 346 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 SYT14Q8NB59 555 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 FGFBP3Q8TAT2 258 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 ZNF519Q8TB69 540 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 HTRA1Q92743 480 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 MCUR1Q96AQ8 359 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 SLC7A6OSQ96CW6 309 aaPredicted RBP14.69□□□□□ -0.06
CD9-209ENST00000540891 PERPQ96FX8 193 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 TSPAN32Q96QS1 320 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 KCNK17Q96T54 332 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 TRAF4Q9BUZ4 470 aaPredicted RBP14.69□□□□□ -0.06
CD9-209ENST00000540891 GSX2Q9BZM3 304 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 MUC13Q9H3R2 512 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 TMEM38BQ9NVV0 291 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 POU2F3Q9UKI9 436 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 MOKQ9UQ07 419 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 TMEM5Q9Y2B1 443 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 ZNF469Q96JG9 3925 aaPredicted RBP14.69□□□□□ -0.06
CD9-209ENST00000540891 F8P00451 2351 aa14.68□□□□□ -0.06
CD9-209ENST00000540891 HIVEP1P15822 2718 aa14.68□□□□□ -0.06
CD9-209ENST00000540891 TMCC2O75069 709 aa14.68□□□□□ -0.06
CD9-209ENST00000540891 PTP4A3O75365 173 aa14.68□□□□□ -0.06
CD9-209ENST00000540891 GADD45GO95257 159 aa14.68□□□□□ -0.06
CD9-209ENST00000540891 CALCRP30988 508 aa14.68□□□□□ -0.06
CD9-209ENST00000540891 RRM2P31350 389 aa14.68□□□□□ -0.06
CD9-209ENST00000540891 MAGEA2P43356 314 aa14.68□□□□□ -0.06
CD9-209ENST00000540891 CAPZA2P47755 286 aa14.68□□□□□ -0.06
CD9-209ENST00000540891 PTH2RP49190 550 aa14.68□□□□□ -0.06
CD9-209ENST00000540891 IDH3GP51553 393 aaPredicted RBP14.68□□□□□ -0.06
CD9-209ENST00000540891 FXYD6P3P58550 94 aa14.68□□□□□ -0.06
CD9-209ENST00000540891 FMODQ06828 376 aa14.68□□□□□ -0.06
CD9-209ENST00000540891 TAF11Q15544 211 aa14.68□□□□□ -0.06
CD9-209ENST00000540891 ZBED5Q49AG3 693 aa14.68□□□□□ -0.06
CD9-209ENST00000540891 MTX3Q5HYI7 312 aa14.68□□□□□ -0.06
CD9-209ENST00000540891 C10orf128Q5T292 105 aa14.68□□□□□ -0.06
CD9-209ENST00000540891 HDDC2Q7Z4H3 204 aa14.68□□□□□ -0.06
CD9-209ENST00000540891 DHFR2Q86XF0 187 aa14.68□□□□□ -0.06
CD9-209ENST00000540891 SKA3Q8IX90 412 aa14.68□□□□□ -0.06
CD9-209ENST00000540891 SLC22A24Q8N4F4 322 aa14.68□□□□□ -0.06
CD9-209ENST00000540891 CLDN22Q8N7P3 220 aa14.68□□□□□ -0.06
CD9-209ENST00000540891 ASB9Q96DX5 294 aa14.68□□□□□ -0.06
CD9-209ENST00000540891 DHRS9Q9BPW9 319 aa14.68□□□□□ -0.06
CD9-209ENST00000540891 THTPAQ9BU02 230 aa14.68□□□□□ -0.06
CD9-209ENST00000540891 KATNB1Q9BVA0 655 aa14.68□□□□□ -0.06
CD9-209ENST00000540891 MOV10Q9HCE1 1003 aaKnown RBP14.68□□□□□ -0.06
CD9-209ENST00000540891 SIGLEC7Q9Y286 467 aa14.68□□□□□ -0.06
CD9-209ENST00000540891 ATP23Q9Y6H3 246 aa14.68□□□□□ -0.06
CD9-209ENST00000540891 VPS13CQ709C8 3753 aa14.67□□□□□ -0.06
CD9-209ENST00000540891 ACOT8O14734 319 aa14.67□□□□□ -0.06
CD9-209ENST00000540891 SLC2A10O95528 541 aa14.67□□□□□ -0.06
CD9-209ENST00000540891 TTKP33981 857 aa14.67□□□□□ -0.06
CD9-209ENST00000540891 ARR3P36575 388 aa14.67□□□□□ -0.06
CD9-209ENST00000540891 ERVK-25P63136 954 aa14.67□□□□□ -0.06
CD9-209ENST00000540891 PIGFQ07326 219 aa14.67□□□□□ -0.06
CD9-209ENST00000540891 NPRL3Q12980 569 aa14.67□□□□□ -0.06
CD9-209ENST00000540891 GSG1Q2KHT4 349 aa14.67□□□□□ -0.06
CD9-209ENST00000540891 C11orf71Q6IPW1 123 aa14.67□□□□□ -0.06
CD9-209ENST00000540891 FAM122BQ7Z309 247 aa14.67□□□□□ -0.06
CD9-209ENST00000540891 ZER1Q7Z7L7 766 aa14.67□□□□□ -0.06
CD9-209ENST00000540891 DEPDC4Q8N2C3 294 aa14.67□□□□□ -0.06
CD9-209ENST00000540891 CCDC124Q96CT7 223 aaKnown RBP14.67□□□□□ -0.06
CD9-209ENST00000540891 TMUB1Q9BVT8 246 aa14.67□□□□□ -0.06
CD9-209ENST00000540891 GRIP2Q9C0E4 1043 aa14.67□□□□□ -0.06
CD9-209ENST00000540891 CXorf56Q9H5V9 222 aa14.67□□□□□ -0.06
CD9-209ENST00000540891 STX18Q9P2W9 335 aaKnown RBP14.67□□□□□ -0.06
CD9-209ENST00000540891 ADAM18Q9Y3Q7 739 aa14.67□□□□□ -0.06
CD9-209ENST00000540891 UGT2A1Q9Y4X1 527 aa14.67□□□□□ -0.06
CD9-209ENST00000540891 CD14P08571 375 aa14.66□□□□□ -0.06
CD9-209ENST00000540891 PATE4P0C8F1 98 aa14.66□□□□□ -0.06
CD9-209ENST00000540891 CD79AP11912 226 aa14.66□□□□□ -0.06
CD9-209ENST00000540891 ACVR1BP36896 505 aa14.66□□□□□ -0.06
CD9-209ENST00000540891 CDKN1AP38936 164 aa14.66□□□□□ -0.06
CD9-209ENST00000540891 SMIM11AP58511 58 aa14.66□□□□□ -0.06
CD9-209ENST00000540891 Q5PR19 223 aa14.66□□□□□ -0.06
CD9-209ENST00000540891 SHEQ5VZ18 495 aa14.66□□□□□ -0.06
CD9-209ENST00000540891 PGM2L1Q6PCE3 622 aa14.66□□□□□ -0.06
CD9-209ENST00000540891 SLC25A47Q6Q0C1 308 aa14.66□□□□□ -0.06
CD9-209ENST00000540891 THSD4Q6ZMP0 1018 aa14.66□□□□□ -0.06
CD9-209ENST00000540891 ARIH2OSQ8N7S6 290 aa14.66□□□□□ -0.06
CD9-209ENST00000540891 MS4A3Q96HJ5 214 aa14.66□□□□□ -0.06
CD9-209ENST00000540891 RSRC1Q96IZ7 334 aaKnown RBP14.66□□□□□ -0.06
CD9-209ENST00000540891 GPX7Q96SL4 187 aaPredicted RBP14.66□□□□□ -0.06
CD9-209ENST00000540891 SH3GL3Q99963 347 aa14.66□□□□□ -0.06
CD9-209ENST00000540891 ALG12Q9BV10 488 aa14.66□□□□□ -0.06
CD9-209ENST00000540891 MAGIXQ9H6Y5 334 aa14.66□□□□□ -0.06
CD9-209ENST00000540891 SMURF2Q9HAU4 748 aa14.66□□□□□ -0.06
CD9-209ENST00000540891 USF3Q68DE3 2245 aa14.65□□□□□ -0.06
CD9-209ENST00000540891 IGHV2OR16-5A0A0B4J2B6 119 aa14.65□□□□□ -0.06
CD9-209ENST00000540891 UBL3O95164 117 aa14.65□□□□□ -0.06
CD9-209ENST00000540891 CRYAAP02489 173 aa14.65□□□□□ -0.06
CD9-209ENST00000540891 OR8G3PP0DMU2 310 aa14.65□□□□□ -0.06
CD9-209ENST00000540891 ZNF14P17017 642 aaPredicted RBP14.65□□□□□ -0.06
CD9-209ENST00000540891 GIPRP48546 466 aa14.65□□□□□ -0.06
CD9-209ENST00000540891 FABP6P51161 128 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms