RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, human

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM65-203	ENST00000540812	MT-ATP6	P00846	226 aa		13.91	□□□□□ -0.18
TRIM65-203	ENST00000540812	SERPINA5	P05154	406 aa		13.91	□□□□□ -0.18
TRIM65-203	ENST00000540812	SELPLG	Q14242	412 aa		13.91	□□□□□ -0.18
TRIM65-203	ENST00000540812	MELK	Q14680	651 aa		13.91	□□□□□ -0.18
TRIM65-203	ENST00000540812	ZNF74	Q16587	644 aa		13.91	□□□□□ -0.18
TRIM65-203	ENST00000540812	RUNDC3A	Q59EK9	446 aa		13.91	□□□□□ -0.18
TRIM65-203	ENST00000540812	ZNF613	Q6PF04	617 aa		13.91	□□□□□ -0.18
TRIM65-203	ENST00000540812	LRFN4	Q6PJG9	635 aa		13.91	□□□□□ -0.18
TRIM65-203	ENST00000540812	PIWIL3	Q7Z3Z3	882 aa	Known RBP	13.91	□□□□□ -0.18
TRIM65-203	ENST00000540812	GLCCI1	Q86VQ1	547 aa		13.91	□□□□□ -0.18
TRIM65-203	ENST00000540812	MEX3D	Q86XN8	651 aa	Known RBP	13.91	□□□□□ -0.18
TRIM65-203	ENST00000540812	LRRC17	Q8N6Y2	441 aa		13.91	□□□□□ -0.18
TRIM65-203	ENST00000540812	OR6X1	Q8NH79	312 aa		13.91	□□□□□ -0.18
TRIM65-203	ENST00000540812	TMEM186	Q96B77	213 aa		13.91	□□□□□ -0.18
TRIM65-203	ENST00000540812	TSPAN32	Q96QS1	320 aa		13.91	□□□□□ -0.18
TRIM65-203	ENST00000540812	SH3GL3	Q99963	347 aa		13.91	□□□□□ -0.18
TRIM65-203	ENST00000540812	METTL17	Q9H7H0	456 aa	Predicted RBP	13.91	□□□□□ -0.18
TRIM65-203	ENST00000540812	TMEM38B	Q9NVV0	291 aa		13.91	□□□□□ -0.18
TRIM65-203	ENST00000540812	HIF1AN	Q9NWT6	349 aa		13.91	□□□□□ -0.18
TRIM65-203	ENST00000540812	TAS2R5	Q9NYW4	299 aa		13.91	□□□□□ -0.18
TRIM65-203	ENST00000540812	METRN	Q9UJH8	293 aa		13.91	□□□□□ -0.18
TRIM65-203	ENST00000540812	KPNA4	O00629	521 aa	Predicted RBP	13.9	□□□□□ -0.18
TRIM65-203	ENST00000540812	PPIH	O43447	177 aa	Known RBP	13.9	□□□□□ -0.18
TRIM65-203	ENST00000540812	CHP2	O43745	196 aa		13.9	□□□□□ -0.18
TRIM65-203	ENST00000540812	RP2	O75695	350 aa		13.9	□□□□□ -0.18
TRIM65-203	ENST00000540812	CLPTM1	O96005	669 aa		13.9	□□□□□ -0.18
TRIM65-203	ENST00000540812	FAM157B	P0CG42	384 aa		13.9	□□□□□ -0.18
TRIM65-203	ENST00000540812	GAA	P10253	952 aa		13.9	□□□□□ -0.18
TRIM65-203	ENST00000540812	CCL2	P13500	99 aa		13.9	□□□□□ -0.18
TRIM65-203	ENST00000540812	PCMT1	P22061	227 aa		13.9	□□□□□ -0.18
TRIM65-203	ENST00000540812	MAGEB1	P43366	347 aa		13.9	□□□□□ -0.18
TRIM65-203	ENST00000540812	ZP4	Q12836	540 aa		13.9	□□□□□ -0.18
TRIM65-203	ENST00000540812	ENTPD8	Q5MY95	495 aa		13.9	□□□□□ -0.18
TRIM65-203	ENST00000540812	SLC22A24	Q8N4F4	322 aa		13.9	□□□□□ -0.18
TRIM65-203	ENST00000540812	C11orf65	Q8NCR3	313 aa		13.9	□□□□□ -0.18
TRIM65-203	ENST00000540812	SLC30A7	Q8NEW0	376 aa		13.9	□□□□□ -0.18
TRIM65-203	ENST00000540812	OR51B6	Q9H340	312 aa		13.9	□□□□□ -0.18
TRIM65-203	ENST00000540812	OCEL1	Q9H607	264 aa		13.9	□□□□□ -0.18
TRIM65-203	ENST00000540812	EVA1A	Q9H8M9	152 aa		13.9	□□□□□ -0.18
TRIM65-203	ENST00000540812	TAAR3P	Q9P1P4	343 aa		13.9	□□□□□ -0.18
TRIM65-203	ENST00000540812	LEF1	Q9UJU2	399 aa	Predicted RBP	13.9	□□□□□ -0.18
TRIM65-203	ENST00000540812	FBXL3	Q9UKT7	428 aa		13.9	□□□□□ -0.18
TRIM65-203	ENST00000540812		M0QX08	132 aa		13.89	□□□□□ -0.19
TRIM65-203	ENST00000540812	RNF13	O43567	381 aa		13.89	□□□□□ -0.19
TRIM65-203	ENST00000540812	TF	P02787	698 aa		13.89	□□□□□ -0.19
TRIM65-203	ENST00000540812	MSMB	P08118	114 aa		13.89	□□□□□ -0.19
TRIM65-203	ENST00000540812	LSP1	P33241	339 aa		13.89	□□□□□ -0.19
TRIM65-203	ENST00000540812	TMEM33	P57088	247 aa		13.89	□□□□□ -0.19
TRIM65-203	ENST00000540812	MTPN	P58546	118 aa		13.89	□□□□□ -0.19
TRIM65-203	ENST00000540812	ERVS71-1	P61550	626 aa		13.89	□□□□□ -0.19
TRIM65-203	ENST00000540812	LMO4	P61968	165 aa		13.89	□□□□□ -0.19
TRIM65-203	ENST00000540812	MRPS11	P82912	194 aa	Known RBP	13.89	□□□□□ -0.19
TRIM65-203	ENST00000540812	REP15	Q6BDI9	236 aa		13.89	□□□□□ -0.19
TRIM65-203	ENST00000540812	RGS7BP	Q6MZT1	257 aa	Predicted RBP	13.89	□□□□□ -0.19
TRIM65-203	ENST00000540812	DHDDS	Q86SQ9	333 aa		13.89	□□□□□ -0.19
TRIM65-203	ENST00000540812	DPP10	Q8N608	796 aa		13.89	□□□□□ -0.19
TRIM65-203	ENST00000540812	SEMA6D	Q8NFY4	1073 aa		13.89	□□□□□ -0.19
TRIM65-203	ENST00000540812	VANGL1	Q8TAA9	524 aa	Predicted RBP	13.89	□□□□□ -0.19
TRIM65-203	ENST00000540812	C10orf82	Q8WW14	230 aa		13.89	□□□□□ -0.19
TRIM65-203	ENST00000540812	ZNF566	Q969W8	418 aa		13.89	□□□□□ -0.19
TRIM65-203	ENST00000540812	SLC25A44	Q96H78	314 aa	Predicted RBP	13.89	□□□□□ -0.19
TRIM65-203	ENST00000540812	LRRC37B	Q96QE4	947 aa		13.89	□□□□□ -0.19
TRIM65-203	ENST00000540812	SAR1A	Q9NR31	198 aa		13.89	□□□□□ -0.19
TRIM65-203	ENST00000540812	NANS	Q9NR45	359 aa		13.89	□□□□□ -0.19
TRIM65-203	ENST00000540812	ZNF346	Q9UL40	294 aa	Known RBP	13.89	□□□□□ -0.19
TRIM65-203	ENST00000540812	NDUFAF1	Q9Y375	327 aa		13.89	□□□□□ -0.19
TRIM65-203	ENST00000540812	ANGPT2	O15123	496 aa		13.88	□□□□□ -0.19
TRIM65-203	ENST00000540812	DHH	O43323	396 aa		13.88	□□□□□ -0.19
TRIM65-203	ENST00000540812	CDC14B	O60729	498 aa		13.88	□□□□□ -0.19
TRIM65-203	ENST00000540812	RGS9	O75916	674 aa	Predicted RBP	13.88	□□□□□ -0.19
TRIM65-203	ENST00000540812	QDPR	P09417	244 aa		13.88	□□□□□ -0.19
TRIM65-203	ENST00000540812	PGA4	P0DJD7	388 aa		13.88	□□□□□ -0.19
TRIM65-203	ENST00000540812	PGA3	P0DJD8	388 aa		13.88	□□□□□ -0.19
TRIM65-203	ENST00000540812	OR8G3P	P0DMU2	310 aa		13.88	□□□□□ -0.19
TRIM65-203	ENST00000540812	CD247	P20963	164 aa		13.88	□□□□□ -0.19
TRIM65-203	ENST00000540812	RUNX1T1	Q06455	604 aa		13.88	□□□□□ -0.19
TRIM65-203	ENST00000540812	SF3A3	Q12874	501 aa	Known RBP eCLIP	13.88	□□□□□ -0.19	1e-6	■■□□□ 11.9
TRIM65-203	ENST00000540812	CYP51A1	Q16850	503 aa		13.88	□□□□□ -0.19
TRIM65-203	ENST00000540812	NKPD1	Q17RQ9	610 aa		13.88	□□□□□ -0.19
TRIM65-203	ENST00000540812	TTC33	Q6PID6	262 aa	Predicted RBP	13.88	□□□□□ -0.19
TRIM65-203	ENST00000540812	THSD4	Q6ZMP0	1018 aa		13.88	□□□□□ -0.19
TRIM65-203	ENST00000540812	DEF8	Q6ZN54	512 aa		13.88	□□□□□ -0.19
TRIM65-203	ENST00000540812	RETREG3	Q86VR2	466 aa		13.88	□□□□□ -0.19
TRIM65-203	ENST00000540812	OR4K5	Q8NGD3	323 aa		13.88	□□□□□ -0.19
TRIM65-203	ENST00000540812	ADAMTS16	Q8TE57	1224 aa		13.88	□□□□□ -0.19
TRIM65-203	ENST00000540812	GTF3A	Q92664	365 aa	Known RBP	13.88	□□□□□ -0.19
TRIM65-203	ENST00000540812	TAMM41	Q96BW9	452 aa		13.88	□□□□□ -0.19
TRIM65-203	ENST00000540812	SLC7A7	Q9UM01	511 aa		13.88	□□□□□ -0.19
TRIM65-203	ENST00000540812	IGLV3-9	A0A075B6K5	115 aa		13.87	□□□□□ -0.19
TRIM65-203	ENST00000540812	C17orf100	A8MU93	164 aa		13.87	□□□□□ -0.19
TRIM65-203	ENST00000540812	SLC22A2	O15244	555 aa		13.87	□□□□□ -0.19
TRIM65-203	ENST00000540812	ASAH2B	P0C7U1	165 aa		13.87	□□□□□ -0.19
TRIM65-203	ENST00000540812	ZNF250	P15622	560 aa		13.87	□□□□□ -0.19
TRIM65-203	ENST00000540812	RBBP4	Q09028	425 aa		13.87	□□□□□ -0.19
TRIM65-203	ENST00000540812	KLF10	Q13118	480 aa		13.87	□□□□□ -0.19
TRIM65-203	ENST00000540812	OR51F2	Q8NH61	342 aa		13.87	□□□□□ -0.19
TRIM65-203	ENST00000540812	SYNPR	Q8TBG9	265 aa		13.87	□□□□□ -0.19
TRIM65-203	ENST00000540812	ZNF347	Q96SE7	839 aa		13.87	□□□□□ -0.19
TRIM65-203	ENST00000540812	CGREF1	Q99674	301 aa		13.87	□□□□□ -0.19
TRIM65-203	ENST00000540812	ZNF426	Q9BUY5	554 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms